RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
CCDC78-207ENST00000466708 CAMSAP2Q08AD1 1489 aa29.8■■■□□ 2.36
CCDC78-207ENST00000466708 ZNF644Q9H582 1327 aaPredicted RBP29.78■■■□□ 2.36
CCDC78-207ENST00000466708 ERCC6L2Q5T890 1561 aa29.78■■■□□ 2.36
CCDC78-207ENST00000466708 ABCC2Q92887 1545 aa29.76■■■□□ 2.35
CCDC78-207ENST00000466708 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
CCDC78-207ENST00000466708 SIN3AQ96ST3 1273 aa29.71■■■□□ 2.35
CCDC78-207ENST00000466708 NEUROD1Q13562 356 aa29.66■■■□□ 2.34
CCDC78-207ENST00000466708 UHRF1BP1LA0JNW5 1464 aa29.66■■■□□ 2.34
CCDC78-207ENST00000466708 KDM6BO15054 1643 aa29.66■■■□□ 2.34
CCDC78-207ENST00000466708 CROCC2H7BZ55 1655 aa29.66■■■□□ 2.34
CCDC78-207ENST00000466708 ADGBQ8N7X0 1667 aa29.66■■■□□ 2.34
CCDC78-207ENST00000466708 ZNF777Q9ULD5 760 aaPredicted RBP29.64■■■□□ 2.34
CCDC78-207ENST00000466708 ADGRL2O95490 1459 aa29.64■■■□□ 2.34
CCDC78-207ENST00000466708 TRIM52Q96A61 297 aa29.6■■■□□ 2.33
CCDC78-207ENST00000466708 NCOA1Q15788 1441 aa29.6■■■□□ 2.33
CCDC78-207ENST00000466708 SHANK2Q9UPX8 1470 aa29.59■■■□□ 2.33
CCDC78-207ENST00000466708 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
CCDC78-207ENST00000466708 ANKRD30AQ9BXX3 1397 aa29.55■■■□□ 2.32
CCDC78-207ENST00000466708 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
CCDC78-207ENST00000466708 ARHGEF5Q12774 1597 aa29.54■■■□□ 2.32
CCDC78-207ENST00000466708 CDC42BPBQ9Y5S2 1711 aa29.54■■■□□ 2.32
CCDC78-207ENST00000466708 MPHOSPH9Q99550 1183 aa29.53■■■□□ 2.32
CCDC78-207ENST00000466708 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
CCDC78-207ENST00000466708 DENND4BO75064 1496 aaPredicted RBP29.52■■■□□ 2.32
CCDC78-207ENST00000466708 PPP1R15AO75807 674 aaPredicted RBP29.52■■■□□ 2.32
CCDC78-207ENST00000466708 ZCCHC11Q5TAX3 1644 aaKnown RBP29.52■■■□□ 2.32
CCDC78-207ENST00000466708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.5■■■□□ 2.31
CCDC78-207ENST00000466708 RSPH4AQ5TD94 716 aa29.49■■■□□ 2.31
CCDC78-207ENST00000466708 TTC37Q6PGP7 1564 aa29.48■■■□□ 2.31
CCDC78-207ENST00000466708 C9orf84Q5VXU9 1444 aa29.47■■■□□ 2.31
CCDC78-207ENST00000466708 SAMD9LQ8IVG5 1584 aa29.47■■■□□ 2.31
CCDC78-207ENST00000466708 TSPY4P0CV99 314 aa29.46■■■□□ 2.31
CCDC78-207ENST00000466708 TSPY10P0CW01 314 aa29.46■■■□□ 2.31
CCDC78-207ENST00000466708 MBD5Q9P267 1494 aa29.46■■■□□ 2.31
CCDC78-207ENST00000466708 MYO5CQ9NQX4 1742 aa29.44■■■□□ 2.3
CCDC78-207ENST00000466708 CCDC141Q6ZP82 1450 aa29.42■■■□□ 2.3
CCDC78-207ENST00000466708 ARHGAP5Q13017 1502 aa29.41■■■□□ 2.3
CCDC78-207ENST00000466708 HNRNPMP52272 730 aaKnown RBP eCLIP29.4■■■□□ 2.3
CCDC78-207ENST00000466708 ANKRD50Q9ULJ7 1429 aa29.4■■■□□ 2.3
CCDC78-207ENST00000466708 PLEKHH2Q8IVE3 1493 aa29.4■■■□□ 2.3
CCDC78-207ENST00000466708 OSCARQ8IYS5 282 aa29.39■■■□□ 2.3
CCDC78-207ENST00000466708 SLC4A1APQ9BWU0 796 aaKnown RBP29.36■■■□□ 2.29
CCDC78-207ENST00000466708 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
CCDC78-207ENST00000466708 KCNH8Q96L42 1107 aa29.35■■■□□ 2.29
CCDC78-207ENST00000466708 ANKRD30BQ9BXX2 1392 aa29.35■■■□□ 2.29
CCDC78-207ENST00000466708 PZPP20742 1482 aa29.34■■■□□ 2.29
CCDC78-207ENST00000466708 PLCH2O75038 1416 aa29.34■■■□□ 2.29
CCDC78-207ENST00000466708 MAST1Q9Y2H9 1570 aa29.32■■■□□ 2.28
CCDC78-207ENST00000466708 SYCP2Q9BX26 1530 aa29.32■■■□□ 2.28
CCDC78-207ENST00000466708 KIF15Q9NS87 1388 aa29.3■■■□□ 2.28
CCDC78-207ENST00000466708 MIER1Q8N108 512 aa29.29■■■□□ 2.28
CCDC78-207ENST00000466708 RPRD2Q5VT52 1461 aaKnown RBP29.27■■■□□ 2.28
CCDC78-207ENST00000466708 ARAP3Q8WWN8 1544 aa29.27■■■□□ 2.28
CCDC78-207ENST00000466708 EFCAB2Q5VUJ9 269 aa29.27■■■□□ 2.28
CCDC78-207ENST00000466708 WDR7Q9Y4E6 1490 aa29.25■■■□□ 2.27
CCDC78-207ENST00000466708 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
CCDC78-207ENST00000466708 FOXD1Q16676 465 aa29.25■■■□□ 2.27
CCDC78-207ENST00000466708 PLXNC1O60486 1568 aa29.19■■■□□ 2.26
CCDC78-207ENST00000466708 NUP155O75694 1391 aa29.18■■■□□ 2.26
CCDC78-207ENST00000466708 ABCC1P33527 1531 aa29.17■■■□□ 2.26
CCDC78-207ENST00000466708 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
CCDC78-207ENST00000466708 PKD2Q13563 968 aa29.15■■■□□ 2.26
CCDC78-207ENST00000466708 L3MBTL2Q969R5 705 aa29.15■■■□□ 2.26
CCDC78-207ENST00000466708 ABCA9Q8IUA7 1624 aa29.13■■■□□ 2.25
CCDC78-207ENST00000466708 TEX14Q8IWB6 1497 aa29.12■■■□□ 2.25
CCDC78-207ENST00000466708 ASXL2Q76L83 1435 aa29.1■■■□□ 2.25
CCDC78-207ENST00000466708 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
CCDC78-207ENST00000466708 CENPBP07199 599 aaPredicted RBP29.08■■■□□ 2.25
CCDC78-207ENST00000466708 NPM1P06748 294 aaKnown RBP eCLIP29.07■■■□□ 2.24
CCDC78-207ENST00000466708 UNC13BO14795 1591 aa29.06■■■□□ 2.24
CCDC78-207ENST00000466708 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
CCDC78-207ENST00000466708 ERBINQ96RT1 1412 aa29.04■■■□□ 2.24
CCDC78-207ENST00000466708 TRAPPC8Q9Y2L5 1435 aa29.04■■■□□ 2.24
CCDC78-207ENST00000466708 FAM135AQ9P2D6 1515 aa29.03■■■□□ 2.24
CCDC78-207ENST00000466708 FANCAO15360 1455 aa29.01■■■□□ 2.23
CCDC78-207ENST00000466708 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
CCDC78-207ENST00000466708 SPAG9O60271 1321 aaKnown RBP28.96■■■□□ 2.23
CCDC78-207ENST00000466708 DDX10Q13206 875 aaKnown RBP28.96■■■□□ 2.23
CCDC78-207ENST00000466708 IQGAP3Q86VI3 1631 aa28.95■■■□□ 2.23
CCDC78-207ENST00000466708 EIF4G2P78344 907 aaKnown RBP eCLIP28.95■■■□□ 2.23
CCDC78-207ENST00000466708 MAGI2Q86UL8 1455 aa28.95■■■□□ 2.22
CCDC78-207ENST00000466708 ZFYVE16Q7Z3T8 1539 aa28.92■■■□□ 2.22
CCDC78-207ENST00000466708 NBPF8Q3BBV2 869 aa28.92■■■□□ 2.22
CCDC78-207ENST00000466708 ADGRL1O94910 1474 aa28.9■■■□□ 2.22
CCDC78-207ENST00000466708 HSPA5P11021 654 aaKnown RBP28.9■■■□□ 2.22
CCDC78-207ENST00000466708 AFAP1Q8N556 730 aa28.9■■■□□ 2.22
CCDC78-207ENST00000466708 SCAPERQ9BY12 1400 aa28.87■■■□□ 2.21
CCDC78-207ENST00000466708 INO80Q9ULG1 1556 aaPredicted RBP28.87■■■□□ 2.21
CCDC78-207ENST00000466708 ATP7AQ04656 1500 aa28.85■■■□□ 2.21
CCDC78-207ENST00000466708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.85■■■□□ 2.21
CCDC78-207ENST00000466708 CFAP74Q9C0B2 1584 aa28.84■■■□□ 2.21
CCDC78-207ENST00000466708 YTHDC1Q96MU7 727 aaKnown RBP28.84■■■□□ 2.21
CCDC78-207ENST00000466708 UHRF1BP1Q6BDS2 1440 aa28.84■■■□□ 2.21
CCDC78-207ENST00000466708 CD109Q6YHK3 1445 aa28.8■■■□□ 2.2
CCDC78-207ENST00000466708 CCDC144AA2RUR9 1427 aa28.8■■■□□ 2.2
CCDC78-207ENST00000466708 ATP10AO60312 1499 aa28.79■■■□□ 2.2
CCDC78-207ENST00000466708 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
CCDC78-207ENST00000466708 ZNF518AQ6AHZ1 1483 aa28.76■■■□□ 2.19
CCDC78-207ENST00000466708 DEPDC5O75140 1603 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms