RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 PTPRKQ15262 1439 aa14.31□□□□□ -0.12
SRPRB-202ENST00000466636 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
SRPRB-202ENST00000466636 CCER1Q8TC90 406 aaPredicted RBP14.3□□□□□ -0.12
SRPRB-202ENST00000466636 ZCCHC11Q5TAX3 1644 aaKnown RBP14.28□□□□□ -0.12
SRPRB-202ENST00000466636 SETD5Q9C0A6 1442 aa14.27□□□□□ -0.12
SRPRB-202ENST00000466636 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
SRPRB-202ENST00000466636 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
SRPRB-202ENST00000466636 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
SRPRB-202ENST00000466636 ITSN2Q9NZM3 1697 aa14.24□□□□□ -0.13
SRPRB-202ENST00000466636 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
SRPRB-202ENST00000466636 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
SRPRB-202ENST00000466636 ABCC5O15440 1437 aa14.23□□□□□ -0.13
SRPRB-202ENST00000466636 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
SRPRB-202ENST00000466636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRPRB-202ENST00000466636 DAPK1P53355 1430 aa14.22□□□□□ -0.13
SRPRB-202ENST00000466636 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
SRPRB-202ENST00000466636 WDR7Q9Y4E6 1490 aa14.2□□□□□ -0.14
SRPRB-202ENST00000466636 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
SRPRB-202ENST00000466636 TTC37Q6PGP7 1564 aa14.2□□□□□ -0.14
SRPRB-202ENST00000466636 NAIPQ13075 1403 aa14.19□□□□□ -0.14
SRPRB-202ENST00000466636 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
SRPRB-202ENST00000466636 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
SRPRB-202ENST00000466636 PREX2Q70Z35 1606 aa14.18□□□□□ -0.14
SRPRB-202ENST00000466636 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
SRPRB-202ENST00000466636 KCNH8Q96L42 1107 aa14.17□□□□□ -0.14
SRPRB-202ENST00000466636 ZNF777Q9ULD5 760 aaPredicted RBP14.17□□□□□ -0.14
SRPRB-202ENST00000466636 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SRPRB-202ENST00000466636 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
SRPRB-202ENST00000466636 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
SRPRB-202ENST00000466636 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
SRPRB-202ENST00000466636 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
SRPRB-202ENST00000466636 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
SRPRB-202ENST00000466636 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
SRPRB-202ENST00000466636 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
SRPRB-202ENST00000466636 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
SRPRB-202ENST00000466636 ADGRL2O95490 1459 aa14.13□□□□□ -0.15
SRPRB-202ENST00000466636 SHANK2Q9UPX8 1470 aa14.13□□□□□ -0.15
SRPRB-202ENST00000466636 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
SRPRB-202ENST00000466636 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
SRPRB-202ENST00000466636 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
SRPRB-202ENST00000466636 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
SRPRB-202ENST00000466636 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
SRPRB-202ENST00000466636 CDC42BPBQ9Y5S2 1711 aa14.12□□□□□ -0.15
SRPRB-202ENST00000466636 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
SRPRB-202ENST00000466636 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
SRPRB-202ENST00000466636 GCC2Q8IWJ2 1684 aa14.1□□□□□ -0.15
SRPRB-202ENST00000466636 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 ABCA9Q8IUA7 1624 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRPRB-202ENST00000466636 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 CCDC141Q6ZP82 1450 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 MYO5CQ9NQX4 1742 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 MAPKBP1O60336 1514 aa14.09□□□□□ -0.15
SRPRB-202ENST00000466636 ZBTB22O15209 634 aa14.08□□□□□ -0.16
SRPRB-202ENST00000466636 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
SRPRB-202ENST00000466636 CYB5RLQ6IPT4 315 aa14.08□□□□□ -0.16
SRPRB-202ENST00000466636 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
SRPRB-202ENST00000466636 KDM6BO15054 1643 aa14.07□□□□□ -0.16
SRPRB-202ENST00000466636 ANKRD30AQ9BXX3 1397 aa14.07□□□□□ -0.16
SRPRB-202ENST00000466636 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
SRPRB-202ENST00000466636 ABCC1P33527 1531 aa14.05□□□□□ -0.16
SRPRB-202ENST00000466636 TSPY4P0CV99 314 aa14.04□□□□□ -0.16
SRPRB-202ENST00000466636 TSPY10P0CW01 314 aa14.04□□□□□ -0.16
SRPRB-202ENST00000466636 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
SRPRB-202ENST00000466636 MAST1Q9Y2H9 1570 aa14.04□□□□□ -0.16
SRPRB-202ENST00000466636 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
SRPRB-202ENST00000466636 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
SRPRB-202ENST00000466636 ACIN1Q9UKV3 1341 aaKnown RBP14.03□□□□□ -0.16
SRPRB-202ENST00000466636 FANCAO15360 1455 aa14.02□□□□□ -0.16
SRPRB-202ENST00000466636 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
SRPRB-202ENST00000466636 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
SRPRB-202ENST00000466636 CD109Q6YHK3 1445 aa13.99□□□□□ -0.17
SRPRB-202ENST00000466636 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
SRPRB-202ENST00000466636 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
SRPRB-202ENST00000466636 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
SRPRB-202ENST00000466636 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
SRPRB-202ENST00000466636 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
SRPRB-202ENST00000466636 GLI2P10070 1586 aa13.96□□□□□ -0.17
SRPRB-202ENST00000466636 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
SRPRB-202ENST00000466636 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
SRPRB-202ENST00000466636 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
SRPRB-202ENST00000466636 PZPP20742 1482 aa13.94□□□□□ -0.18
SRPRB-202ENST00000466636 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
SRPRB-202ENST00000466636 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
SRPRB-202ENST00000466636 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SRPRB-202ENST00000466636 SPAG9O60271 1321 aaKnown RBP13.92□□□□□ -0.18
SRPRB-202ENST00000466636 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
SRPRB-202ENST00000466636 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
SRPRB-202ENST00000466636 NEO1Q92859 1461 aa13.92□□□□□ -0.18
SRPRB-202ENST00000466636 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
SRPRB-202ENST00000466636 DUOX2Q9NRD8 1548 aa13.91□□□□□ -0.18
SRPRB-202ENST00000466636 MAP3K4Q9Y6R4 1608 aa13.9□□□□□ -0.18
SRPRB-202ENST00000466636 DIP2BQ9P265 1576 aa13.9□□□□□ -0.18
SRPRB-202ENST00000466636 INO80Q9ULG1 1556 aaPredicted RBP13.9□□□□□ -0.18
SRPRB-202ENST00000466636 POGZQ7Z3K3 1410 aa13.9□□□□□ -0.19
SRPRB-202ENST00000466636 ERBINQ96RT1 1412 aa13.9□□□□□ -0.19
SRPRB-202ENST00000466636 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
SRPRB-202ENST00000466636 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms