RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
UBE4B-206ENST00000466379 ABCC5O15440 1437 aa19.75■□□□□ 0.75
UBE4B-206ENST00000466379 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
UBE4B-206ENST00000466379 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
UBE4B-206ENST00000466379 AKNAQ7Z591 1439 aa19.72■□□□□ 0.75
UBE4B-206ENST00000466379 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
UBE4B-206ENST00000466379 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
UBE4B-206ENST00000466379 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
UBE4B-206ENST00000466379 ABCC2Q92887 1545 aa19.67■□□□□ 0.74
UBE4B-206ENST00000466379 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
UBE4B-206ENST00000466379 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
UBE4B-206ENST00000466379 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
UBE4B-206ENST00000466379 ADGBQ8N7X0 1667 aa19.6■□□□□ 0.73
UBE4B-206ENST00000466379 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.72
UBE4B-206ENST00000466379 CDC42BPBQ9Y5S2 1711 aa19.57■□□□□ 0.72
UBE4B-206ENST00000466379 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
UBE4B-206ENST00000466379 ZCCHC11Q5TAX3 1644 aaKnown RBP19.57■□□□□ 0.72
UBE4B-206ENST00000466379 NCOA1Q15788 1441 aa19.57■□□□□ 0.72
UBE4B-206ENST00000466379 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
UBE4B-206ENST00000466379 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
UBE4B-206ENST00000466379 FOXD1Q16676 465 aa19.55■□□□□ 0.72
UBE4B-206ENST00000466379 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
UBE4B-206ENST00000466379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBE4B-206ENST00000466379 HNRNPMP52272 730 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBE4B-206ENST00000466379 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
UBE4B-206ENST00000466379 ADGRL2O95490 1459 aa19.55■□□□□ 0.72
UBE4B-206ENST00000466379 SAMD9LQ8IVG5 1584 aa19.54■□□□□ 0.72
UBE4B-206ENST00000466379 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
UBE4B-206ENST00000466379 UHRF1BP1LA0JNW5 1464 aa19.53■□□□□ 0.72
UBE4B-206ENST00000466379 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.71
UBE4B-206ENST00000466379 ANKRD30AQ9BXX3 1397 aa19.51■□□□□ 0.71
UBE4B-206ENST00000466379 MIER1Q8N108 512 aa19.51■□□□□ 0.71
UBE4B-206ENST00000466379 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
UBE4B-206ENST00000466379 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
UBE4B-206ENST00000466379 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
UBE4B-206ENST00000466379 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
UBE4B-206ENST00000466379 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
UBE4B-206ENST00000466379 ARHGEF5Q12774 1597 aa19.48■□□□□ 0.71
UBE4B-206ENST00000466379 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
UBE4B-206ENST00000466379 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
UBE4B-206ENST00000466379 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
UBE4B-206ENST00000466379 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
UBE4B-206ENST00000466379 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
UBE4B-206ENST00000466379 PZPP20742 1482 aa19.45■□□□□ 0.7
UBE4B-206ENST00000466379 CCDC141Q6ZP82 1450 aa19.45■□□□□ 0.7
UBE4B-206ENST00000466379 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
UBE4B-206ENST00000466379 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
UBE4B-206ENST00000466379 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
UBE4B-206ENST00000466379 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
UBE4B-206ENST00000466379 KIF15Q9NS87 1388 aa19.41■□□□□ 0.7
UBE4B-206ENST00000466379 PLCH2O75038 1416 aa19.38■□□□□ 0.69
UBE4B-206ENST00000466379 ARHGEF12Q9NZN5 1544 aa19.37■□□□□ 0.69
UBE4B-206ENST00000466379 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
UBE4B-206ENST00000466379 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
UBE4B-206ENST00000466379 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
UBE4B-206ENST00000466379 WDR7Q9Y4E6 1490 aa19.34■□□□□ 0.69
UBE4B-206ENST00000466379 NUP155O75694 1391 aa19.34■□□□□ 0.69
UBE4B-206ENST00000466379 PKD2Q13563 968 aa19.34■□□□□ 0.69
UBE4B-206ENST00000466379 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.69
UBE4B-206ENST00000466379 PLEKHH2Q8IVE3 1493 aa19.33■□□□□ 0.68
UBE4B-206ENST00000466379 MAST1Q9Y2H9 1570 aa19.33■□□□□ 0.68
UBE4B-206ENST00000466379 EFCAB2Q5VUJ9 269 aa19.32■□□□□ 0.68
UBE4B-206ENST00000466379 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
UBE4B-206ENST00000466379 ABCC1P33527 1531 aa19.3■□□□□ 0.68
UBE4B-206ENST00000466379 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
UBE4B-206ENST00000466379 KDM5DQ9BY66 1539 aa19.29■□□□□ 0.68
UBE4B-206ENST00000466379 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
UBE4B-206ENST00000466379 TRAPPC8Q9Y2L5 1435 aa19.28■□□□□ 0.68
UBE4B-206ENST00000466379 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.68
UBE4B-206ENST00000466379 PLXNC1O60486 1568 aa19.26■□□□□ 0.67
UBE4B-206ENST00000466379 ABCA9Q8IUA7 1624 aa19.24■□□□□ 0.67
UBE4B-206ENST00000466379 NBPF8Q3BBV2 869 aa19.23■□□□□ 0.67
UBE4B-206ENST00000466379 ARAP3Q8WWN8 1544 aa19.23■□□□□ 0.67
UBE4B-206ENST00000466379 FAM135AQ9P2D6 1515 aa19.22■□□□□ 0.67
UBE4B-206ENST00000466379 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
UBE4B-206ENST00000466379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
UBE4B-206ENST00000466379 FANCAO15360 1455 aa19.21■□□□□ 0.67
UBE4B-206ENST00000466379 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
UBE4B-206ENST00000466379 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
UBE4B-206ENST00000466379 UNC13BO14795 1591 aa19.2■□□□□ 0.66
UBE4B-206ENST00000466379 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
UBE4B-206ENST00000466379 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
UBE4B-206ENST00000466379 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
UBE4B-206ENST00000466379 ZFYVE16Q7Z3T8 1539 aa19.15■□□□□ 0.66
UBE4B-206ENST00000466379 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
UBE4B-206ENST00000466379 EIF4G2P78344 907 aaKnown RBP eCLIP19.14■□□□□ 0.66
UBE4B-206ENST00000466379 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
UBE4B-206ENST00000466379 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
UBE4B-206ENST00000466379 SCAPERQ9BY12 1400 aa19.13■□□□□ 0.65
UBE4B-206ENST00000466379 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
UBE4B-206ENST00000466379 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
UBE4B-206ENST00000466379 RTEL1-TNFRSF6BF6WH68 1400 aa19.11■□□□□ 0.65
UBE4B-206ENST00000466379 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
UBE4B-206ENST00000466379 MAGI2Q86UL8 1455 aa19.1■□□□□ 0.65
UBE4B-206ENST00000466379 ATP7AQ04656 1500 aa19.09■□□□□ 0.65
UBE4B-206ENST00000466379 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
UBE4B-206ENST00000466379 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.64
UBE4B-206ENST00000466379 PLA2R1Q13018 1463 aa19.07■□□□□ 0.64
UBE4B-206ENST00000466379 CD109Q6YHK3 1445 aa19.07■□□□□ 0.64
UBE4B-206ENST00000466379 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms