RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 AKNAQ7Z591 1439 aa26.66■■□□□ 1.86
LETM1-202ENST00000466175 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
LETM1-202ENST00000466175 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
LETM1-202ENST00000466175 WDR7Q9Y4E6 1490 aa26.62■■□□□ 1.85
LETM1-202ENST00000466175 NAIPQ13075 1403 aa26.61■■□□□ 1.85
LETM1-202ENST00000466175 ACIN1Q9UKV3 1341 aaKnown RBP26.61■■□□□ 1.85
LETM1-202ENST00000466175 KCNH8Q96L42 1107 aa26.61■■□□□ 1.85
LETM1-202ENST00000466175 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
LETM1-202ENST00000466175 TSPOAP1O95153 1857 aa26.59■■□□□ 1.85
LETM1-202ENST00000466175 GCC2Q8IWJ2 1684 aa26.59■■□□□ 1.85
LETM1-202ENST00000466175 ITSN2Q9NZM3 1697 aa26.54■■□□□ 1.84
LETM1-202ENST00000466175 GLI2P10070 1586 aa26.51■■□□□ 1.83
LETM1-202ENST00000466175 DNMT1P26358 1616 aaKnown RBP26.48■■□□□ 1.83
LETM1-202ENST00000466175 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
LETM1-202ENST00000466175 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
LETM1-202ENST00000466175 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.82
LETM1-202ENST00000466175 DAPK1P53355 1430 aa26.45■■□□□ 1.82
LETM1-202ENST00000466175 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
LETM1-202ENST00000466175 KIF14Q15058 1648 aa26.4■■□□□ 1.82
LETM1-202ENST00000466175 GPATCH8Q9UKJ3 1502 aaKnown RBP26.39■■□□□ 1.82
LETM1-202ENST00000466175 ABCC5O15440 1437 aa26.38■■□□□ 1.81
LETM1-202ENST00000466175 CD109Q6YHK3 1445 aa26.38■■□□□ 1.81
LETM1-202ENST00000466175 SIN3AQ96ST3 1273 aa26.37■■□□□ 1.81
LETM1-202ENST00000466175 RRP7BPQ9NSQ0 103 aa26.36■■□□□ 1.81
LETM1-202ENST00000466175 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
LETM1-202ENST00000466175 ABCA9Q8IUA7 1624 aa26.35■■□□□ 1.81
LETM1-202ENST00000466175 NEUROD1Q13562 356 aa26.35■■□□□ 1.81
LETM1-202ENST00000466175 CFDP1Q9UEE9 299 aaPredicted RBP26.35■■□□□ 1.81
LETM1-202ENST00000466175 CHIC2Q9UKJ5 165 aa26.35■■□□□ 1.81
LETM1-202ENST00000466175 ADGBQ8N7X0 1667 aa26.31■■□□□ 1.8
LETM1-202ENST00000466175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.8
LETM1-202ENST00000466175 TTC37Q6PGP7 1564 aa26.3■■□□□ 1.8
LETM1-202ENST00000466175 CROCC2H7BZ55 1655 aa26.29■■□□□ 1.8
LETM1-202ENST00000466175 CDC42BPAQ5VT25 1732 aa26.29■■□□□ 1.8
LETM1-202ENST00000466175 TONSLQ96HA7 1378 aa26.29■■□□□ 1.8
LETM1-202ENST00000466175 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
LETM1-202ENST00000466175 ADGRL2O95490 1459 aa26.27■■□□□ 1.8
LETM1-202ENST00000466175 TEX14Q8IWB6 1497 aa26.27■■□□□ 1.8
LETM1-202ENST00000466175 KDM6BO15054 1643 aa26.26■■□□□ 1.79
LETM1-202ENST00000466175 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
LETM1-202ENST00000466175 CENPBP07199 599 aaPredicted RBP26.25■■□□□ 1.79
LETM1-202ENST00000466175 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
LETM1-202ENST00000466175 MIER1Q8N108 512 aa26.21■■□□□ 1.79
LETM1-202ENST00000466175 SHANK2Q9UPX8 1470 aa26.21■■□□□ 1.79
LETM1-202ENST00000466175 NCOA1Q15788 1441 aa26.19■■□□□ 1.78
LETM1-202ENST00000466175 MPHOSPH9Q99550 1183 aa26.18■■□□□ 1.78
LETM1-202ENST00000466175 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
LETM1-202ENST00000466175 DENND4BO75064 1496 aaPredicted RBP26.17■■□□□ 1.78
LETM1-202ENST00000466175 ANKRD30AQ9BXX3 1397 aa26.17■■□□□ 1.78
LETM1-202ENST00000466175 MYO5CQ9NQX4 1742 aa26.16■■□□□ 1.78
LETM1-202ENST00000466175 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
LETM1-202ENST00000466175 PREX2Q70Z35 1606 aa26.14■■□□□ 1.78
LETM1-202ENST00000466175 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
LETM1-202ENST00000466175 FANCAO15360 1455 aa26.12■■□□□ 1.77
LETM1-202ENST00000466175 PLCH2O75038 1416 aa26.11■■□□□ 1.77
LETM1-202ENST00000466175 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
LETM1-202ENST00000466175 NEO1Q92859 1461 aa26.08■■□□□ 1.77
LETM1-202ENST00000466175 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
LETM1-202ENST00000466175 CDC42BPBQ9Y5S2 1711 aa26.07■■□□□ 1.76
LETM1-202ENST00000466175 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
LETM1-202ENST00000466175 ANKRD30BQ9BXX2 1392 aa26.05■■□□□ 1.76
LETM1-202ENST00000466175 CFAP74Q9C0B2 1584 aa26.04■■□□□ 1.76
LETM1-202ENST00000466175 RAPGEF3O95398 923 aa26.03■■□□□ 1.76
LETM1-202ENST00000466175 TSPY4P0CV99 314 aa26.03■■□□□ 1.76
LETM1-202ENST00000466175 TSPY10P0CW01 314 aa26.03■■□□□ 1.76
LETM1-202ENST00000466175 ARAP3Q8WWN8 1544 aa26.03■■□□□ 1.76
LETM1-202ENST00000466175 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
LETM1-202ENST00000466175 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
LETM1-202ENST00000466175 SAMD9LQ8IVG5 1584 aa26.02■■□□□ 1.76
LETM1-202ENST00000466175 PZPP20742 1482 aa26.01■■□□□ 1.75
LETM1-202ENST00000466175 RPRD2Q5VT52 1461 aaKnown RBP26.01■■□□□ 1.75
LETM1-202ENST00000466175 CCDC141Q6ZP82 1450 aa26.01■■□□□ 1.75
LETM1-202ENST00000466175 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
LETM1-202ENST00000466175 MBD5Q9P267 1494 aa26.01■■□□□ 1.75
LETM1-202ENST00000466175 PLEKHH2Q8IVE3 1493 aa26■■□□□ 1.75
LETM1-202ENST00000466175 ADGRL1O94910 1474 aa25.98■■□□□ 1.75
LETM1-202ENST00000466175 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
LETM1-202ENST00000466175 KDM5DQ9BY66 1539 aa25.96■■□□□ 1.75
LETM1-202ENST00000466175 FRMPD1Q5SYB0 1578 aa25.95■■□□□ 1.75
LETM1-202ENST00000466175 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
LETM1-202ENST00000466175 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.74
LETM1-202ENST00000466175 RICTORQ6R327 1708 aa25.93■■□□□ 1.74
LETM1-202ENST00000466175 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
LETM1-202ENST00000466175 HNRNPMP52272 730 aaKnown RBP eCLIP25.9■■□□□ 1.745e-9■■■■■ 34.7
LETM1-202ENST00000466175 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
LETM1-202ENST00000466175 ABCC1P33527 1531 aa25.87■■□□□ 1.73
LETM1-202ENST00000466175 SYCP2Q9BX26 1530 aa25.87■■□□□ 1.73
LETM1-202ENST00000466175 ARHGEF12Q9NZN5 1544 aa25.87■■□□□ 1.73
LETM1-202ENST00000466175 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
LETM1-202ENST00000466175 FOXD1Q16676 465 aa25.86■■□□□ 1.73
LETM1-202ENST00000466175 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
LETM1-202ENST00000466175 AFAP1Q8N556 730 aa25.85■■□□□ 1.73
LETM1-202ENST00000466175 PLXNC1O60486 1568 aa25.84■■□□□ 1.73
LETM1-202ENST00000466175 YTHDC1Q96MU7 727 aaKnown RBP25.84■■□□□ 1.73
LETM1-202ENST00000466175 NUP155O75694 1391 aa25.82■■□□□ 1.72
LETM1-202ENST00000466175 DDX10Q13206 875 aaKnown RBP25.81■■□□□ 1.72
LETM1-202ENST00000466175 TRAPPC8Q9Y2L5 1435 aa25.81■■□□□ 1.72
LETM1-202ENST00000466175 PKD2Q13563 968 aa25.8■■□□□ 1.72
LETM1-202ENST00000466175 ZNF518AQ6AHZ1 1483 aa25.79■■□□□ 1.72
LETM1-202ENST00000466175 EIF4G2P78344 907 aaKnown RBP eCLIP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms