RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
CSF3R-208ENST00000466138 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
CSF3R-208ENST00000466138 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
CSF3R-208ENST00000466138 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
CSF3R-208ENST00000466138 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
CSF3R-208ENST00000466138 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
CSF3R-208ENST00000466138 ABCA8O94911 1581 aa18.63■□□□□ 0.57
CSF3R-208ENST00000466138 UGGT2Q9NYU1 1516 aa18.62■□□□□ 0.57
CSF3R-208ENST00000466138 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
CSF3R-208ENST00000466138 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
CSF3R-208ENST00000466138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
CSF3R-208ENST00000466138 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
CSF3R-208ENST00000466138 TRAPPC8Q9Y2L5 1435 aa18.57■□□□□ 0.56
CSF3R-208ENST00000466138 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
CSF3R-208ENST00000466138 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
CSF3R-208ENST00000466138 C3P01024 1663 aa18.56■□□□□ 0.56
CSF3R-208ENST00000466138 ATP10BO94823 1461 aa18.54■□□□□ 0.56
CSF3R-208ENST00000466138 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
CSF3R-208ENST00000466138 ATP10AO60312 1499 aa18.53■□□□□ 0.56
CSF3R-208ENST00000466138 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
CSF3R-208ENST00000466138 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
CSF3R-208ENST00000466138 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
CSF3R-208ENST00000466138 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
CSF3R-208ENST00000466138 PKD2Q13563 968 aa18.5■□□□□ 0.55
CSF3R-208ENST00000466138 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
CSF3R-208ENST00000466138 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
CSF3R-208ENST00000466138 CPS1P31327 1500 aa18.44■□□□□ 0.54
CSF3R-208ENST00000466138 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
CSF3R-208ENST00000466138 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
CSF3R-208ENST00000466138 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
CSF3R-208ENST00000466138 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
CSF3R-208ENST00000466138 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
CSF3R-208ENST00000466138 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
CSF3R-208ENST00000466138 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
CSF3R-208ENST00000466138 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
CSF3R-208ENST00000466138 PLA2R1Q13018 1463 aa18.35■□□□□ 0.53
CSF3R-208ENST00000466138 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
CSF3R-208ENST00000466138 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
CSF3R-208ENST00000466138 RBM33Q96EV2 1170 aaKnown RBP18.31■□□□□ 0.52
CSF3R-208ENST00000466138 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
CSF3R-208ENST00000466138 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
CSF3R-208ENST00000466138 NPATQ14207 1427 aa18.25■□□□□ 0.51
CSF3R-208ENST00000466138 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
CSF3R-208ENST00000466138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSF3R-208ENST00000466138 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
CSF3R-208ENST00000466138 AFAP1Q8N556 730 aa18.24■□□□□ 0.51
CSF3R-208ENST00000466138 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
CSF3R-208ENST00000466138 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
CSF3R-208ENST00000466138 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
CSF3R-208ENST00000466138 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
CSF3R-208ENST00000466138 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
CSF3R-208ENST00000466138 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
CSF3R-208ENST00000466138 ZNF142P52746 1687 aaPredicted RBP18.19■□□□□ 0.5
CSF3R-208ENST00000466138 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
CSF3R-208ENST00000466138 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
CSF3R-208ENST00000466138 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
CSF3R-208ENST00000466138 AGLP35573 1532 aa18.15■□□□□ 0.5
CSF3R-208ENST00000466138 RXRBP28702 533 aa18.15■□□□□ 0.5
CSF3R-208ENST00000466138 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
CSF3R-208ENST00000466138 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
CSF3R-208ENST00000466138 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
CSF3R-208ENST00000466138 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
CSF3R-208ENST00000466138 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
CSF3R-208ENST00000466138 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
CSF3R-208ENST00000466138 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
CSF3R-208ENST00000466138 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
CSF3R-208ENST00000466138 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
CSF3R-208ENST00000466138 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
CSF3R-208ENST00000466138 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
CSF3R-208ENST00000466138 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
CSF3R-208ENST00000466138 PLCH2O75038 1416 aa18.08■□□□□ 0.49
CSF3R-208ENST00000466138 EFCAB2Q5VUJ9 269 aa18.08■□□□□ 0.48
CSF3R-208ENST00000466138 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.48
CSF3R-208ENST00000466138 DNMT1P26358 1616 aaKnown RBP18.08■□□□□ 0.48
CSF3R-208ENST00000466138 FOXD1Q16676 465 aa18.07■□□□□ 0.48
CSF3R-208ENST00000466138 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
CSF3R-208ENST00000466138 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
CSF3R-208ENST00000466138 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
CSF3R-208ENST00000466138 A2ML1A8K2U0 1454 aa18.05■□□□□ 0.48
CSF3R-208ENST00000466138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
CSF3R-208ENST00000466138 CLTCQ00610 1675 aaKnown RBP18.04■□□□□ 0.48
CSF3R-208ENST00000466138 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
CSF3R-208ENST00000466138 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
CSF3R-208ENST00000466138 KDM5CP41229 1560 aa18.02■□□□□ 0.48
CSF3R-208ENST00000466138 LRP6O75581 1613 aa18■□□□□ 0.47
CSF3R-208ENST00000466138 YY1P25490 414 aa17.99■□□□□ 0.47
CSF3R-208ENST00000466138 JCADQ9P266 1359 aa17.98■□□□□ 0.47
CSF3R-208ENST00000466138 SYNMO15061 1565 aa17.98■□□□□ 0.47
CSF3R-208ENST00000466138 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
CSF3R-208ENST00000466138 ROBO1Q9Y6N7 1651 aa17.96■□□□□ 0.47
CSF3R-208ENST00000466138 GGT6Q6P531 493 aa17.95■□□□□ 0.46
CSF3R-208ENST00000466138 RGS12O14924 1447 aa17.95■□□□□ 0.46
CSF3R-208ENST00000466138 CDK12Q9NYV4 1490 aaPredicted RBP17.94■□□□□ 0.46
CSF3R-208ENST00000466138 MLH3Q9UHC1 1453 aa17.94■□□□□ 0.46
CSF3R-208ENST00000466138 ABCC1P33527 1531 aa17.93■□□□□ 0.46
CSF3R-208ENST00000466138 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
CSF3R-208ENST00000466138 FBXO31Q5XUX0 539 aaPredicted RBP17.91■□□□□ 0.46
CSF3R-208ENST00000466138 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
CSF3R-208ENST00000466138 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
CSF3R-208ENST00000466138 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms