RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
PHC3-201ENST00000465896 ARHGEF12Q9NZN5 1544 aa20.51■□□□□ 0.87
PHC3-201ENST00000465896 SCAPERQ9BY12 1400 aa20.51■□□□□ 0.87
PHC3-201ENST00000465896 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
PHC3-201ENST00000465896 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
PHC3-201ENST00000465896 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
PHC3-201ENST00000465896 ATP10AO60312 1499 aa20.44■□□□□ 0.86
PHC3-201ENST00000465896 KDM5CP41229 1560 aa20.44■□□□□ 0.86
PHC3-201ENST00000465896 MLECQ14165 292 aa20.44■□□□□ 0.86
PHC3-201ENST00000465896 STRCQ7RTU9 1775 aa20.42■□□□□ 0.86
PHC3-201ENST00000465896 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
PHC3-201ENST00000465896 PREX1Q8TCU6 1659 aa20.42■□□□□ 0.86
PHC3-201ENST00000465896 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
PHC3-201ENST00000465896 DIP2CQ9Y2E4 1556 aa20.39■□□□□ 0.85
PHC3-201ENST00000465896 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.85
PHC3-201ENST00000465896 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
PHC3-201ENST00000465896 ABCA6Q8N139 1617 aa20.38■□□□□ 0.85
PHC3-201ENST00000465896 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
PHC3-201ENST00000465896 CEBPAP49715 358 aaPredicted RBP20.37■□□□□ 0.85
PHC3-201ENST00000465896 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
PHC3-201ENST00000465896 ZNF518AQ6AHZ1 1483 aa20.35■□□□□ 0.85
PHC3-201ENST00000465896 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
PHC3-201ENST00000465896 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
PHC3-201ENST00000465896 AFAP1Q8N556 730 aa20.34■□□□□ 0.85
PHC3-201ENST00000465896 CERKQ8TCT0 537 aa20.33■□□□□ 0.85
PHC3-201ENST00000465896 C3P01024 1663 aa20.32■□□□□ 0.84
PHC3-201ENST00000465896 PREX2Q70Z35 1606 aa20.32■□□□□ 0.84
PHC3-201ENST00000465896 ITSN2Q9NZM3 1697 aa20.31■□□□□ 0.84
PHC3-201ENST00000465896 ABCC1P33527 1531 aa20.31■□□□□ 0.84
PHC3-201ENST00000465896 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
PHC3-201ENST00000465896 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
PHC3-201ENST00000465896 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
PHC3-201ENST00000465896 CDC42BPAQ5VT25 1732 aa20.29■□□□□ 0.84
PHC3-201ENST00000465896 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
PHC3-201ENST00000465896 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
PHC3-201ENST00000465896 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
PHC3-201ENST00000465896 AGLP35573 1532 aa20.26■□□□□ 0.83
PHC3-201ENST00000465896 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
PHC3-201ENST00000465896 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
PHC3-201ENST00000465896 CLIP1P30622 1438 aa20.22■□□□□ 0.83
PHC3-201ENST00000465896 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
PHC3-201ENST00000465896 CASKIN1Q8WXD9 1431 aa20.21■□□□□ 0.83
PHC3-201ENST00000465896 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
PHC3-201ENST00000465896 LTBP4Q8N2S1 1624 aa20.18■□□□□ 0.82
PHC3-201ENST00000465896 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
PHC3-201ENST00000465896 PTPRTO14522 1441 aa20.14■□□□□ 0.81
PHC3-201ENST00000465896 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
PHC3-201ENST00000465896 MROH2AA6NES4 1674 aa20.13■□□□□ 0.81
PHC3-201ENST00000465896 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
PHC3-201ENST00000465896 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
PHC3-201ENST00000465896 ILDR2Q71H61 639 aa20.11■□□□□ 0.81
PHC3-201ENST00000465896 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
PHC3-201ENST00000465896 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
PHC3-201ENST00000465896 PLXNC1O60486 1568 aa20.1■□□□□ 0.81
PHC3-201ENST00000465896 INO80Q9ULG1 1556 aaPredicted RBP20.09■□□□□ 0.81
PHC3-201ENST00000465896 MYT1LQ9UL68 1186 aa20.09■□□□□ 0.81
PHC3-201ENST00000465896 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
PHC3-201ENST00000465896 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
PHC3-201ENST00000465896 CAMSAP1Q5T5Y3 1602 aa20.06■□□□□ 0.8
PHC3-201ENST00000465896 CNTLNQ9NXG0 1405 aa20.06■□□□□ 0.8
PHC3-201ENST00000465896 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
PHC3-201ENST00000465896 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
PHC3-201ENST00000465896 NPATQ14207 1427 aa20.03■□□□□ 0.8
PHC3-201ENST00000465896 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
PHC3-201ENST00000465896 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.81e-6■■■■□ 24.5
PHC3-201ENST00000465896 ZMYM3Q14202 1370 aa20.02■□□□□ 0.8
PHC3-201ENST00000465896 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
PHC3-201ENST00000465896 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
PHC3-201ENST00000465896 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
PHC3-201ENST00000465896 DISP3Q9P2K9 1392 aa19.99■□□□□ 0.79
PHC3-201ENST00000465896 PTPRKQ15262 1439 aa19.99■□□□□ 0.79
PHC3-201ENST00000465896 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
PHC3-201ENST00000465896 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
PHC3-201ENST00000465896 A2MP01023 1474 aa19.98■□□□□ 0.79
PHC3-201ENST00000465896 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
PHC3-201ENST00000465896 CEP170BQ9Y4F5 1589 aaPredicted RBP19.96■□□□□ 0.79
PHC3-201ENST00000465896 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
PHC3-201ENST00000465896 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
PHC3-201ENST00000465896 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
PHC3-201ENST00000465896 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
PHC3-201ENST00000465896 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
PHC3-201ENST00000465896 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
PHC3-201ENST00000465896 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
PHC3-201ENST00000465896 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
PHC3-201ENST00000465896 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
PHC3-201ENST00000465896 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
PHC3-201ENST00000465896 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
PHC3-201ENST00000465896 DNMT1P26358 1616 aaKnown RBP19.9■□□□□ 0.78
PHC3-201ENST00000465896 SOCS7O14512 581 aa19.89■□□□□ 0.77
PHC3-201ENST00000465896 NEURL4Q96JN8 1562 aa19.87■□□□□ 0.77
PHC3-201ENST00000465896 GGT6Q6P531 493 aa19.86■□□□□ 0.77
PHC3-201ENST00000465896 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
PHC3-201ENST00000465896 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
PHC3-201ENST00000465896 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
PHC3-201ENST00000465896 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
PHC3-201ENST00000465896 RTEL1-TNFRSF6BF6WH68 1400 aa19.83■□□□□ 0.76
PHC3-201ENST00000465896 PKD2Q13563 968 aa19.82■□□□□ 0.76
PHC3-201ENST00000465896 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
PHC3-201ENST00000465896 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
PHC3-201ENST00000465896 FBXO31Q5XUX0 539 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms