RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
TMCO1-204ENST00000465705 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
TMCO1-204ENST00000465705 KIF14Q15058 1648 aa17.84■□□□□ 0.45
TMCO1-204ENST00000465705 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
TMCO1-204ENST00000465705 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
TMCO1-204ENST00000465705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.443e-8■■■□□ 16.7
TMCO1-204ENST00000465705 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
TMCO1-204ENST00000465705 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
TMCO1-204ENST00000465705 PPRC1Q5VV67 1664 aaKnown RBP17.8■□□□□ 0.44
TMCO1-204ENST00000465705 TTC37Q6PGP7 1564 aa17.8■□□□□ 0.44
TMCO1-204ENST00000465705 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
TMCO1-204ENST00000465705 EHBP1L1Q8N3D4 1523 aa17.78■□□□□ 0.44
TMCO1-204ENST00000465705 MAP3K1Q13233 1512 aa17.77■□□□□ 0.43
TMCO1-204ENST00000465705 APLP2Q06481 763 aa17.76■□□□□ 0.43
TMCO1-204ENST00000465705 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
TMCO1-204ENST00000465705 MYO5CQ9NQX4 1742 aa17.73■□□□□ 0.43
TMCO1-204ENST00000465705 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
TMCO1-204ENST00000465705 KDM6BO15054 1643 aa17.71■□□□□ 0.43
TMCO1-204ENST00000465705 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
TMCO1-204ENST00000465705 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
TMCO1-204ENST00000465705 PLCH2O75038 1416 aa17.7■□□□□ 0.42
TMCO1-204ENST00000465705 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
TMCO1-204ENST00000465705 FANCAO15360 1455 aa17.69■□□□□ 0.42
TMCO1-204ENST00000465705 ARAP3Q8WWN8 1544 aa17.69■□□□□ 0.42
TMCO1-204ENST00000465705 CAPN15O75808 1086 aa17.69■□□□□ 0.42
TMCO1-204ENST00000465705 NEO1Q92859 1461 aa17.69■□□□□ 0.42
TMCO1-204ENST00000465705 PREX2Q70Z35 1606 aa17.68■□□□□ 0.42
TMCO1-204ENST00000465705 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
TMCO1-204ENST00000465705 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
TMCO1-204ENST00000465705 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
TMCO1-204ENST00000465705 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
TMCO1-204ENST00000465705 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
TMCO1-204ENST00000465705 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
TMCO1-204ENST00000465705 ZBTB22O15209 634 aa17.65■□□□□ 0.42
TMCO1-204ENST00000465705 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
TMCO1-204ENST00000465705 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
TMCO1-204ENST00000465705 GPATCH8Q9UKJ3 1502 aaKnown RBP17.63■□□□□ 0.41
TMCO1-204ENST00000465705 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
TMCO1-204ENST00000465705 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
TMCO1-204ENST00000465705 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
TMCO1-204ENST00000465705 COL17A1Q9UMD9 1497 aaPredicted RBP17.62■□□□□ 0.41
TMCO1-204ENST00000465705 ADGRL1O94910 1474 aa17.61■□□□□ 0.41
TMCO1-204ENST00000465705 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
TMCO1-204ENST00000465705 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
TMCO1-204ENST00000465705 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
TMCO1-204ENST00000465705 ABCC1P33527 1531 aa17.56■□□□□ 0.4
TMCO1-204ENST00000465705 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
TMCO1-204ENST00000465705 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
TMCO1-204ENST00000465705 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
TMCO1-204ENST00000465705 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
TMCO1-204ENST00000465705 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
TMCO1-204ENST00000465705 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
TMCO1-204ENST00000465705 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
TMCO1-204ENST00000465705 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
TMCO1-204ENST00000465705 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.4
TMCO1-204ENST00000465705 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
TMCO1-204ENST00000465705 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
TMCO1-204ENST00000465705 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
TMCO1-204ENST00000465705 MIA2Q96PC5 1412 aa17.48■□□□□ 0.39
TMCO1-204ENST00000465705 KIAA1107Q9UPP5 1409 aa17.48■□□□□ 0.39
TMCO1-204ENST00000465705 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
TMCO1-204ENST00000465705 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
TMCO1-204ENST00000465705 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
TMCO1-204ENST00000465705 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
TMCO1-204ENST00000465705 KDM5CP41229 1560 aa17.46■□□□□ 0.39
TMCO1-204ENST00000465705 DSG3P32926 999 aa17.46■□□□□ 0.39
TMCO1-204ENST00000465705 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
TMCO1-204ENST00000465705 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
TMCO1-204ENST00000465705 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
TMCO1-204ENST00000465705 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
TMCO1-204ENST00000465705 ZFYVE16Q7Z3T8 1539 aa17.43■□□□□ 0.38
TMCO1-204ENST00000465705 ARHGEF40Q8TER5 1519 aa17.43■□□□□ 0.38
TMCO1-204ENST00000465705 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
TMCO1-204ENST00000465705 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
TMCO1-204ENST00000465705 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
TMCO1-204ENST00000465705 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
TMCO1-204ENST00000465705 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
TMCO1-204ENST00000465705 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
TMCO1-204ENST00000465705 CCDC141Q6ZP82 1450 aa17.4■□□□□ 0.38
TMCO1-204ENST00000465705 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
TMCO1-204ENST00000465705 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
TMCO1-204ENST00000465705 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
TMCO1-204ENST00000465705 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
TMCO1-204ENST00000465705 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
TMCO1-204ENST00000465705 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
TMCO1-204ENST00000465705 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
TMCO1-204ENST00000465705 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
TMCO1-204ENST00000465705 ABCB7O75027 752 aa17.36■□□□□ 0.37
TMCO1-204ENST00000465705 ABCA6Q8N139 1617 aa17.35■□□□□ 0.37
TMCO1-204ENST00000465705 KIDINS220Q9ULH0 1771 aa17.35■□□□□ 0.37
TMCO1-204ENST00000465705 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
TMCO1-204ENST00000465705 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
TMCO1-204ENST00000465705 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.36
TMCO1-204ENST00000465705 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
TMCO1-204ENST00000465705 ATP10AO60312 1499 aa17.32■□□□□ 0.36
TMCO1-204ENST00000465705 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
TMCO1-204ENST00000465705 RTEL1-TNFRSF6BF6WH68 1400 aa17.31■□□□□ 0.36
TMCO1-204ENST00000465705 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
TMCO1-204ENST00000465705 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
TMCO1-204ENST00000465705 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms