RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 PLCH2O75038 1416 aa17.22■□□□□ 0.35
GPNMB-206ENST00000465673 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
GPNMB-206ENST00000465673 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
GPNMB-206ENST00000465673 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
GPNMB-206ENST00000465673 CEBPAP49715 358 aaPredicted RBP17.19■□□□□ 0.34
GPNMB-206ENST00000465673 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
GPNMB-206ENST00000465673 ATP10AO60312 1499 aa17.16■□□□□ 0.34
GPNMB-206ENST00000465673 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
GPNMB-206ENST00000465673 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
GPNMB-206ENST00000465673 KIF14Q15058 1648 aa17.15■□□□□ 0.34
GPNMB-206ENST00000465673 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
GPNMB-206ENST00000465673 CERKQ8TCT0 537 aa17.14■□□□□ 0.33
GPNMB-206ENST00000465673 C9orf84Q5VXU9 1444 aa17.13■□□□□ 0.33
GPNMB-206ENST00000465673 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
GPNMB-206ENST00000465673 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
GPNMB-206ENST00000465673 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
GPNMB-206ENST00000465673 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
GPNMB-206ENST00000465673 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
GPNMB-206ENST00000465673 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
GPNMB-206ENST00000465673 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
GPNMB-206ENST00000465673 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
GPNMB-206ENST00000465673 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
GPNMB-206ENST00000465673 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
GPNMB-206ENST00000465673 KDM5CP41229 1560 aa17.04■□□□□ 0.32
GPNMB-206ENST00000465673 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
GPNMB-206ENST00000465673 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
GPNMB-206ENST00000465673 CLIP1P30622 1438 aa17.03■□□□□ 0.32
GPNMB-206ENST00000465673 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
GPNMB-206ENST00000465673 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
GPNMB-206ENST00000465673 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
GPNMB-206ENST00000465673 ABCA6Q8N139 1617 aa17■□□□□ 0.31
GPNMB-206ENST00000465673 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
GPNMB-206ENST00000465673 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
GPNMB-206ENST00000465673 ABCC1P33527 1531 aa16.96■□□□□ 0.31
GPNMB-206ENST00000465673 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
GPNMB-206ENST00000465673 C3P01024 1663 aa16.95■□□□□ 0.3
GPNMB-206ENST00000465673 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
GPNMB-206ENST00000465673 PREX2Q70Z35 1606 aa16.95■□□□□ 0.3
GPNMB-206ENST00000465673 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
GPNMB-206ENST00000465673 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
GPNMB-206ENST00000465673 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
GPNMB-206ENST00000465673 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
GPNMB-206ENST00000465673 AGLP35573 1532 aa16.92■□□□□ 0.3
GPNMB-206ENST00000465673 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
GPNMB-206ENST00000465673 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
GPNMB-206ENST00000465673 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
GPNMB-206ENST00000465673 HNRNPMP52272 730 aaKnown RBP eCLIP16.91■□□□□ 0.3
GPNMB-206ENST00000465673 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
GPNMB-206ENST00000465673 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
GPNMB-206ENST00000465673 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.3
GPNMB-206ENST00000465673 PTPRTO14522 1441 aa16.88■□□□□ 0.29
GPNMB-206ENST00000465673 SAMD9LQ8IVG5 1584 aa16.87■□□□□ 0.29
GPNMB-206ENST00000465673 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
GPNMB-206ENST00000465673 SYCP2Q9BX26 1530 aa16.86■□□□□ 0.29
GPNMB-206ENST00000465673 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
GPNMB-206ENST00000465673 ZMYM3Q14202 1370 aa16.85■□□□□ 0.29
GPNMB-206ENST00000465673 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
GPNMB-206ENST00000465673 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
GPNMB-206ENST00000465673 NCKAP5LQ9HCH0 1330 aa16.84■□□□□ 0.29
GPNMB-206ENST00000465673 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
GPNMB-206ENST00000465673 FYCO1Q9BQS8 1478 aa16.83■□□□□ 0.28
GPNMB-206ENST00000465673 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
GPNMB-206ENST00000465673 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
GPNMB-206ENST00000465673 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
GPNMB-206ENST00000465673 ZNF644Q9H582 1327 aaPredicted RBP16.8■□□□□ 0.28
GPNMB-206ENST00000465673 GGT6Q6P531 493 aa16.8■□□□□ 0.28
GPNMB-206ENST00000465673 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
GPNMB-206ENST00000465673 NPATQ14207 1427 aa16.79■□□□□ 0.28
GPNMB-206ENST00000465673 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
GPNMB-206ENST00000465673 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
GPNMB-206ENST00000465673 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
GPNMB-206ENST00000465673 A2MP01023 1474 aa16.77■□□□□ 0.28
GPNMB-206ENST00000465673 MROH2AA6NES4 1674 aa16.77■□□□□ 0.28
GPNMB-206ENST00000465673 SOCS7O14512 581 aa16.76■□□□□ 0.27
GPNMB-206ENST00000465673 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
GPNMB-206ENST00000465673 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
GPNMB-206ENST00000465673 PLXNC1O60486 1568 aa16.75■□□□□ 0.27
GPNMB-206ENST00000465673 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
GPNMB-206ENST00000465673 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
GPNMB-206ENST00000465673 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
GPNMB-206ENST00000465673 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
GPNMB-206ENST00000465673 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
GPNMB-206ENST00000465673 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
GPNMB-206ENST00000465673 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
GPNMB-206ENST00000465673 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
GPNMB-206ENST00000465673 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
GPNMB-206ENST00000465673 PKD2Q13563 968 aa16.69■□□□□ 0.26
GPNMB-206ENST00000465673 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
GPNMB-206ENST00000465673 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
GPNMB-206ENST00000465673 FBXO31Q5XUX0 539 aaPredicted RBP16.68■□□□□ 0.26
GPNMB-206ENST00000465673 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
GPNMB-206ENST00000465673 ZNF142P52746 1687 aaPredicted RBP16.67■□□□□ 0.26
GPNMB-206ENST00000465673 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
GPNMB-206ENST00000465673 KIF3BO15066 747 aa16.65■□□□□ 0.26
GPNMB-206ENST00000465673 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
GPNMB-206ENST00000465673 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
GPNMB-206ENST00000465673 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
GPNMB-206ENST00000465673 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
GPNMB-206ENST00000465673 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
GPNMB-206ENST00000465673 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms