RNA–Protein interactions for RNA: ENST00000465309.6

LMO7-208, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-208ENST00000465309 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
LMO7-208ENST00000465309 ZFYVE16Q7Z3T8 1539 aa11.53□□□□□ -0.56
LMO7-208ENST00000465309 NCOA1Q15788 1441 aa11.52□□□□□ -0.56
LMO7-208ENST00000465309 ARHGEF12Q9NZN5 1544 aa11.51□□□□□ -0.57
LMO7-208ENST00000465309 IGF1RP08069 1367 aa11.51□□□□□ -0.57
LMO7-208ENST00000465309 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
LMO7-208ENST00000465309 TOM1O60784 492 aa11.5□□□□□ -0.57
LMO7-208ENST00000465309 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
LMO7-208ENST00000465309 SRCAPQ6ZRS2 3230 aa11.49□□□□□ -0.57
LMO7-208ENST00000465309 CAMSAP1Q5T5Y3 1602 aa11.48□□□□□ -0.57
LMO7-208ENST00000465309 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
LMO7-208ENST00000465309 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
LMO7-208ENST00000465309 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
LMO7-208ENST00000465309 ABCA8O94911 1581 aa11.46□□□□□ -0.57
LMO7-208ENST00000465309 UGGT2Q9NYU1 1516 aa11.46□□□□□ -0.57
LMO7-208ENST00000465309 C3P01024 1663 aa11.45□□□□□ -0.58
LMO7-208ENST00000465309 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
LMO7-208ENST00000465309 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
LMO7-208ENST00000465309 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
LMO7-208ENST00000465309 KCNA4P22459 653 aa11.42□□□□□ -0.58
LMO7-208ENST00000465309 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
LMO7-208ENST00000465309 HECW1Q76N89 1606 aa11.41□□□□□ -0.58
LMO7-208ENST00000465309 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.58
LMO7-208ENST00000465309 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
LMO7-208ENST00000465309 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
LMO7-208ENST00000465309 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
LMO7-208ENST00000465309 C9orf84Q5VXU9 1444 aa11.38□□□□□ -0.59
LMO7-208ENST00000465309 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
LMO7-208ENST00000465309 ATP10AO60312 1499 aa11.37□□□□□ -0.59
LMO7-208ENST00000465309 ATP10BO94823 1461 aa11.36□□□□□ -0.59
LMO7-208ENST00000465309 PTPRKQ15262 1439 aa11.35□□□□□ -0.59
LMO7-208ENST00000465309 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
LMO7-208ENST00000465309 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
LMO7-208ENST00000465309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
LMO7-208ENST00000465309 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
LMO7-208ENST00000465309 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
LMO7-208ENST00000465309 CPS1P31327 1500 aa11.34□□□□□ -0.59
LMO7-208ENST00000465309 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
LMO7-208ENST00000465309 PKD2Q13563 968 aa11.32□□□□□ -0.6
LMO7-208ENST00000465309 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
LMO7-208ENST00000465309 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
LMO7-208ENST00000465309 PLA2R1Q13018 1463 aa11.28□□□□□ -0.6
LMO7-208ENST00000465309 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
LMO7-208ENST00000465309 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
LMO7-208ENST00000465309 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
LMO7-208ENST00000465309 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
LMO7-208ENST00000465309 ZNF142P52746 1687 aaPredicted RBP11.27□□□□□ -0.61
LMO7-208ENST00000465309 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.61
LMO7-208ENST00000465309 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
LMO7-208ENST00000465309 RAPGEF2Q9Y4G8 1499 aa11.26□□□□□ -0.61
LMO7-208ENST00000465309 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
LMO7-208ENST00000465309 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
LMO7-208ENST00000465309 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
LMO7-208ENST00000465309 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
LMO7-208ENST00000465309 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
LMO7-208ENST00000465309 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
LMO7-208ENST00000465309 NPATQ14207 1427 aa11.22□□□□□ -0.61
LMO7-208ENST00000465309 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
LMO7-208ENST00000465309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
LMO7-208ENST00000465309 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
LMO7-208ENST00000465309 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
LMO7-208ENST00000465309 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
LMO7-208ENST00000465309 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
LMO7-208ENST00000465309 LRRC7Q96NW7 1537 aa11.19□□□□□ -0.62
LMO7-208ENST00000465309 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
LMO7-208ENST00000465309 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
LMO7-208ENST00000465309 MROH2AA6NES4 1674 aa11.18□□□□□ -0.62
LMO7-208ENST00000465309 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
LMO7-208ENST00000465309 AGLP35573 1532 aa11.18□□□□□ -0.62
LMO7-208ENST00000465309 ABCA6Q8N139 1617 aa11.17□□□□□ -0.62
LMO7-208ENST00000465309 NEURL4Q96JN8 1562 aa11.17□□□□□ -0.62
LMO7-208ENST00000465309 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
LMO7-208ENST00000465309 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
LMO7-208ENST00000465309 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
LMO7-208ENST00000465309 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
LMO7-208ENST00000465309 REREQ9P2R6 1566 aa11.15□□□□□ -0.62
LMO7-208ENST00000465309 ZMYM3Q14202 1370 aa11.15□□□□□ -0.63
LMO7-208ENST00000465309 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
LMO7-208ENST00000465309 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
LMO7-208ENST00000465309 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
LMO7-208ENST00000465309 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
LMO7-208ENST00000465309 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
LMO7-208ENST00000465309 SYNMO15061 1565 aa11.12□□□□□ -0.63
LMO7-208ENST00000465309 KDM5CP41229 1560 aa11.11□□□□□ -0.63
LMO7-208ENST00000465309 NUP153P49790 1475 aaKnown RBP11.11□□□□□ -0.63
LMO7-208ENST00000465309 MEX3CQ5U5Q3 659 aaKnown RBP11.1□□□□□ -0.63
LMO7-208ENST00000465309 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
LMO7-208ENST00000465309 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
LMO7-208ENST00000465309 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
LMO7-208ENST00000465309 PLCH2O75038 1416 aa11.09□□□□□ -0.63
LMO7-208ENST00000465309 RXRBP28702 533 aa11.08□□□□□ -0.64
LMO7-208ENST00000465309 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
LMO7-208ENST00000465309 EFCAB2Q5VUJ9 269 aa11.07□□□□□ -0.64
LMO7-208ENST00000465309 ROBO1Q9Y6N7 1651 aa11.07□□□□□ -0.64
LMO7-208ENST00000465309 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
LMO7-208ENST00000465309 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
LMO7-208ENST00000465309 ITSN2Q9NZM3 1697 aa11.05□□□□□ -0.64
LMO7-208ENST00000465309 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
LMO7-208ENST00000465309 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
LMO7-208ENST00000465309 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms