RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PLPPR3Q6T4P5 718 aa24.37■■□□□ 1.49
MCF2L-220ENST00000464800 FMN1Q68DA7 1419 aa24.36■■□□□ 1.49
MCF2L-220ENST00000464800 HSPA2P54652 639 aa24.35■■□□□ 1.49
MCF2L-220ENST00000464800 KIF14Q15058 1648 aa24.35■■□□□ 1.49
MCF2L-220ENST00000464800 MLECQ14165 292 aa24.33■■□□□ 1.49
MCF2L-220ENST00000464800 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
MCF2L-220ENST00000464800 ARHGEF12Q9NZN5 1544 aa24.32■■□□□ 1.48
MCF2L-220ENST00000464800 ATP10AO60312 1499 aa24.32■■□□□ 1.48
MCF2L-220ENST00000464800 PREX1Q8TCU6 1659 aa24.3■■□□□ 1.48
MCF2L-220ENST00000464800 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-220ENST00000464800 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
MCF2L-220ENST00000464800 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
MCF2L-220ENST00000464800 EFCAB2Q5VUJ9 269 aa24.28■■□□□ 1.48
MCF2L-220ENST00000464800 CDK11AQ9UQ88 783 aaPredicted RBP24.28■■□□□ 1.48
MCF2L-220ENST00000464800 ZNF518AQ6AHZ1 1483 aa24.27■■□□□ 1.48
MCF2L-220ENST00000464800 ARHGAP5Q13017 1502 aa24.27■■□□□ 1.48
MCF2L-220ENST00000464800 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
MCF2L-220ENST00000464800 KDM5CP41229 1560 aa24.26■■□□□ 1.47
MCF2L-220ENST00000464800 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
MCF2L-220ENST00000464800 TROQ12816 1431 aaPredicted RBP24.25■■□□□ 1.47
MCF2L-220ENST00000464800 CLIP1P30622 1438 aa24.24■■□□□ 1.47
MCF2L-220ENST00000464800 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
MCF2L-220ENST00000464800 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.46
MCF2L-220ENST00000464800 REREQ9P2R6 1566 aa24.18■■□□□ 1.46
MCF2L-220ENST00000464800 PREX2Q70Z35 1606 aa24.17■■□□□ 1.46
MCF2L-220ENST00000464800 CERKQ8TCT0 537 aa24.17■■□□□ 1.46
MCF2L-220ENST00000464800 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
MCF2L-220ENST00000464800 AFAP1Q8N556 730 aa24.14■■□□□ 1.45
MCF2L-220ENST00000464800 CEBPAP49715 358 aaPredicted RBP24.13■■□□□ 1.45
MCF2L-220ENST00000464800 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
MCF2L-220ENST00000464800 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
MCF2L-220ENST00000464800 ABCC1P33527 1531 aa24.13■■□□□ 1.45
MCF2L-220ENST00000464800 STRCQ7RTU9 1775 aa24.13■■□□□ 1.45
MCF2L-220ENST00000464800 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
MCF2L-220ENST00000464800 SETD1BQ9UPS6 1966 aaKnown RBP24.11■■□□□ 1.45
MCF2L-220ENST00000464800 CCDC18Q5T9S5 1454 aa24.11■■□□□ 1.45
MCF2L-220ENST00000464800 MLH3Q9UHC1 1453 aa24.11■■□□□ 1.45
MCF2L-220ENST00000464800 C3P01024 1663 aa24.11■■□□□ 1.45
MCF2L-220ENST00000464800 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
MCF2L-220ENST00000464800 AGLP35573 1532 aa24.07■■□□□ 1.44
MCF2L-220ENST00000464800 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
MCF2L-220ENST00000464800 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
MCF2L-220ENST00000464800 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
MCF2L-220ENST00000464800 KIDINS220Q9ULH0 1771 aa24.04■■□□□ 1.44
MCF2L-220ENST00000464800 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
MCF2L-220ENST00000464800 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
MCF2L-220ENST00000464800 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
MCF2L-220ENST00000464800 CNTLNQ9NXG0 1405 aa23.97■■□□□ 1.43
MCF2L-220ENST00000464800 SAMD9LQ8IVG5 1584 aa23.96■■□□□ 1.43
MCF2L-220ENST00000464800 MROH2AA6NES4 1674 aa23.95■■□□□ 1.43
MCF2L-220ENST00000464800 PTPRTO14522 1441 aa23.95■■□□□ 1.42
MCF2L-220ENST00000464800 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
MCF2L-220ENST00000464800 SUPT6HQ7KZ85 1726 aaKnown RBP23.9■■□□□ 1.42
MCF2L-220ENST00000464800 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
MCF2L-220ENST00000464800 NPATQ14207 1427 aa23.87■■□□□ 1.41
MCF2L-220ENST00000464800 ZNF777Q9ULD5 760 aaPredicted RBP23.87■■□□□ 1.41
MCF2L-220ENST00000464800 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
MCF2L-220ENST00000464800 GPATCH8Q9UKJ3 1502 aaKnown RBP23.87■■□□□ 1.41
MCF2L-220ENST00000464800 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
MCF2L-220ENST00000464800 LTBP4Q8N2S1 1624 aa23.86■■□□□ 1.41
MCF2L-220ENST00000464800 CLTCQ00610 1675 aaKnown RBP23.85■■□□□ 1.41
MCF2L-220ENST00000464800 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
MCF2L-220ENST00000464800 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
MCF2L-220ENST00000464800 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
MCF2L-220ENST00000464800 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.41
MCF2L-220ENST00000464800 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
MCF2L-220ENST00000464800 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.4
MCF2L-220ENST00000464800 IQSEC2Q5JU85 1478 aa23.82■■□□□ 1.4
MCF2L-220ENST00000464800 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
MCF2L-220ENST00000464800 KIAA1107Q9UPP5 1409 aa23.81■■□□□ 1.4
MCF2L-220ENST00000464800 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
MCF2L-220ENST00000464800 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.4
MCF2L-220ENST00000464800 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
MCF2L-220ENST00000464800 SPATA31D1Q6ZQQ2 1576 aa23.78■■□□□ 1.4
MCF2L-220ENST00000464800 A2MP01023 1474 aa23.78■■□□□ 1.4
MCF2L-220ENST00000464800 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
MCF2L-220ENST00000464800 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
MCF2L-220ENST00000464800 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-220ENST00000464800 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
MCF2L-220ENST00000464800 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
MCF2L-220ENST00000464800 TIAM1Q13009 1591 aa23.71■■□□□ 1.39
MCF2L-220ENST00000464800 PTPRKQ15262 1439 aa23.71■■□□□ 1.39
MCF2L-220ENST00000464800 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
MCF2L-220ENST00000464800 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
MCF2L-220ENST00000464800 NCKAP5LQ9HCH0 1330 aa23.68■■□□□ 1.38
MCF2L-220ENST00000464800 GGT6Q6P531 493 aa23.67■■□□□ 1.38
MCF2L-220ENST00000464800 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
MCF2L-220ENST00000464800 ZNF335Q9H4Z2 1342 aaPredicted RBP23.65■■□□□ 1.38
MCF2L-220ENST00000464800 PKD2Q13563 968 aa23.65■■□□□ 1.38
MCF2L-220ENST00000464800 SOCS7O14512 581 aa23.64■■□□□ 1.37
MCF2L-220ENST00000464800 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.37
MCF2L-220ENST00000464800 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
MCF2L-220ENST00000464800 RTEL1-TNFRSF6BF6WH68 1400 aa23.61■■□□□ 1.37
MCF2L-220ENST00000464800 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
MCF2L-220ENST00000464800 POLR1AO95602 1720 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-220ENST00000464800 A2ML1A8K2U0 1454 aa23.61■■□□□ 1.37
MCF2L-220ENST00000464800 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-220ENST00000464800 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
MCF2L-220ENST00000464800 FAM135AQ9P2D6 1515 aa23.57■■□□□ 1.36
MCF2L-220ENST00000464800 UBAP1LF5GYI3 381 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms