RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
CLCNKA-204ENST00000464764 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
CLCNKA-204ENST00000464764 ANKRD30BQ9BXX2 1392 aa17.07■□□□□ 0.32
CLCNKA-204ENST00000464764 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
CLCNKA-204ENST00000464764 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
CLCNKA-204ENST00000464764 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
CLCNKA-204ENST00000464764 SPATA31E1Q6ZUB1 1445 aa17.05■□□□□ 0.32
CLCNKA-204ENST00000464764 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
CLCNKA-204ENST00000464764 CUL7Q14999 1698 aa17.04■□□□□ 0.32
CLCNKA-204ENST00000464764 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
CLCNKA-204ENST00000464764 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
CLCNKA-204ENST00000464764 SAMD9Q5K651 1589 aa17.03■□□□□ 0.32
CLCNKA-204ENST00000464764 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.32
CLCNKA-204ENST00000464764 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
CLCNKA-204ENST00000464764 HECW1Q76N89 1606 aa17.02■□□□□ 0.32
CLCNKA-204ENST00000464764 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
CLCNKA-204ENST00000464764 NPM2Q86SE8 214 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-204ENST00000464764 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
CLCNKA-204ENST00000464764 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
CLCNKA-204ENST00000464764 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
CLCNKA-204ENST00000464764 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
CLCNKA-204ENST00000464764 CDK13Q14004 1512 aaKnown RBP17■□□□□ 0.31
CLCNKA-204ENST00000464764 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
CLCNKA-204ENST00000464764 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
CLCNKA-204ENST00000464764 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
CLCNKA-204ENST00000464764 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
CLCNKA-204ENST00000464764 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-204ENST00000464764 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
CLCNKA-204ENST00000464764 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-204ENST00000464764 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-204ENST00000464764 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-204ENST00000464764 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
CLCNKA-204ENST00000464764 EXOC6Q8TAG9 804 aa16.94■□□□□ 0.3
CLCNKA-204ENST00000464764 USP47Q96K76 1375 aa16.94■□□□□ 0.3
CLCNKA-204ENST00000464764 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-204ENST00000464764 ABCC5O15440 1437 aa16.92■□□□□ 0.3
CLCNKA-204ENST00000464764 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-204ENST00000464764 DAPK1P53355 1430 aa16.92■□□□□ 0.3
CLCNKA-204ENST00000464764 MIA2Q96PC5 1412 aa16.91■□□□□ 0.3
CLCNKA-204ENST00000464764 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
CLCNKA-204ENST00000464764 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
CLCNKA-204ENST00000464764 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
CLCNKA-204ENST00000464764 BCORL1Q5H9F3 1711 aa16.89■□□□□ 0.29
CLCNKA-204ENST00000464764 PKD2Q13563 968 aa16.88■□□□□ 0.29
CLCNKA-204ENST00000464764 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
CLCNKA-204ENST00000464764 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
CLCNKA-204ENST00000464764 KDM2AQ9Y2K7 1162 aa16.88■□□□□ 0.29
CLCNKA-204ENST00000464764 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-204ENST00000464764 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
CLCNKA-204ENST00000464764 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
CLCNKA-204ENST00000464764 ROCK1Q13464 1354 aa16.85■□□□□ 0.29
CLCNKA-204ENST00000464764 PDE4AP27815 886 aa16.85■□□□□ 0.29
CLCNKA-204ENST00000464764 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
CLCNKA-204ENST00000464764 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
CLCNKA-204ENST00000464764 PZPP20742 1482 aa16.84■□□□□ 0.29
CLCNKA-204ENST00000464764 PLIN1O60240 522 aa16.83■□□□□ 0.28
CLCNKA-204ENST00000464764 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.28
CLCNKA-204ENST00000464764 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
CLCNKA-204ENST00000464764 RCAN3Q9UKA8 241 aa16.83■□□□□ 0.28
CLCNKA-204ENST00000464764 NEFMP07197 916 aa16.82■□□□□ 0.28
CLCNKA-204ENST00000464764 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
CLCNKA-204ENST00000464764 BACH2Q9BYV9 841 aa16.78■□□□□ 0.28
CLCNKA-204ENST00000464764 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
CLCNKA-204ENST00000464764 WDR62O43379 1518 aa16.78■□□□□ 0.28
CLCNKA-204ENST00000464764 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
CLCNKA-204ENST00000464764 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.28
CLCNKA-204ENST00000464764 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
CLCNKA-204ENST00000464764 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.27
CLCNKA-204ENST00000464764 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.27
CLCNKA-204ENST00000464764 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
CLCNKA-204ENST00000464764 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
CLCNKA-204ENST00000464764 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
CLCNKA-204ENST00000464764 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
CLCNKA-204ENST00000464764 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
CLCNKA-204ENST00000464764 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
CLCNKA-204ENST00000464764 SLC4A3P48751 1232 aa16.74■□□□□ 0.27
CLCNKA-204ENST00000464764 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
CLCNKA-204ENST00000464764 KDM5CP41229 1560 aa16.74■□□□□ 0.27
CLCNKA-204ENST00000464764 ARID4BQ4LE39 1312 aaPredicted RBP16.73■□□□□ 0.27
CLCNKA-204ENST00000464764 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
CLCNKA-204ENST00000464764 RALBP1Q15311 655 aa16.72■□□□□ 0.27
CLCNKA-204ENST00000464764 NUP155O75694 1391 aa16.71■□□□□ 0.27
CLCNKA-204ENST00000464764 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.26
CLCNKA-204ENST00000464764 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.26
CLCNKA-204ENST00000464764 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.26
CLCNKA-204ENST00000464764 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.26
CLCNKA-204ENST00000464764 CRBNQ96SW2 442 aa16.71■□□□□ 0.26
CLCNKA-204ENST00000464764 C20orf194Q5TEA3 1177 aa16.69■□□□□ 0.26
CLCNKA-204ENST00000464764 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
CLCNKA-204ENST00000464764 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
CLCNKA-204ENST00000464764 NBPF1Q3BBV0 1214 aa16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 MS4A1P11836 297 aa16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 ANKRD50Q9ULJ7 1429 aa16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 KIF14Q15058 1648 aa16.66■□□□□ 0.26
CLCNKA-204ENST00000464764 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
CLCNKA-204ENST00000464764 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
CLCNKA-204ENST00000464764 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
CLCNKA-204ENST00000464764 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms