RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 PTPRGP23470 1445 aa10.92□□□□□ -0.66
RPGR-204ENST00000464437 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
RPGR-204ENST00000464437 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
RPGR-204ENST00000464437 KIF21BO75037 1637 aa10.91□□□□□ -0.66
RPGR-204ENST00000464437 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
RPGR-204ENST00000464437 GOLGA3Q08378 1498 aa10.9□□□□□ -0.66
RPGR-204ENST00000464437 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPGR-204ENST00000464437 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
RPGR-204ENST00000464437 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
RPGR-204ENST00000464437 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
RPGR-204ENST00000464437 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
RPGR-204ENST00000464437 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
RPGR-204ENST00000464437 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
RPGR-204ENST00000464437 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
RPGR-204ENST00000464437 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
RPGR-204ENST00000464437 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
RPGR-204ENST00000464437 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
RPGR-204ENST00000464437 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
RPGR-204ENST00000464437 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
RPGR-204ENST00000464437 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
RPGR-204ENST00000464437 ABCC10Q5T3U5 1492 aa10.8□□□□□ -0.68
RPGR-204ENST00000464437 ABCA8O94911 1581 aa10.79□□□□□ -0.68
RPGR-204ENST00000464437 DIP2BQ9P265 1576 aa10.79□□□□□ -0.68
RPGR-204ENST00000464437 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
RPGR-204ENST00000464437 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
RPGR-204ENST00000464437 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
RPGR-204ENST00000464437 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
RPGR-204ENST00000464437 METRNQ9UJH8 293 aa10.78□□□□□ -0.68
RPGR-204ENST00000464437 ASXL2Q76L83 1435 aa10.77□□□□□ -0.68
RPGR-204ENST00000464437 FAM69CQ0P6D2 419 aa10.77□□□□□ -0.69
RPGR-204ENST00000464437 FHOD3Q2V2M9 1422 aa10.76□□□□□ -0.69
RPGR-204ENST00000464437 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
RPGR-204ENST00000464437 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
RPGR-204ENST00000464437 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
RPGR-204ENST00000464437 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
RPGR-204ENST00000464437 RAPGEF6Q8TEU7 1601 aa10.74□□□□□ -0.69
RPGR-204ENST00000464437 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
RPGR-204ENST00000464437 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
RPGR-204ENST00000464437 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
RPGR-204ENST00000464437 WDR7Q9Y4E6 1490 aa10.72□□□□□ -0.69
RPGR-204ENST00000464437 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.69
RPGR-204ENST00000464437 SLC39A7Q92504 469 aa10.71□□□□□ -0.69
RPGR-204ENST00000464437 GLI2P10070 1586 aa10.7□□□□□ -0.7
RPGR-204ENST00000464437 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
RPGR-204ENST00000464437 ATP10BO94823 1461 aa10.69□□□□□ -0.7
RPGR-204ENST00000464437 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
RPGR-204ENST00000464437 C7P10643 843 aa10.69□□□□□ -0.7
RPGR-204ENST00000464437 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
RPGR-204ENST00000464437 TSPOAP1O95153 1857 aa10.68□□□□□ -0.7
RPGR-204ENST00000464437 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
RPGR-204ENST00000464437 MAP3K4Q9Y6R4 1608 aa10.67□□□□□ -0.7
RPGR-204ENST00000464437 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
RPGR-204ENST00000464437 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
RPGR-204ENST00000464437 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
RPGR-204ENST00000464437 HECW1Q76N89 1606 aa10.65□□□□□ -0.7
RPGR-204ENST00000464437 PPRC1Q5VV67 1664 aaKnown RBP10.64□□□□□ -0.71
RPGR-204ENST00000464437 MAMSTRQ6ZN01 415 aa10.64□□□□□ -0.71
RPGR-204ENST00000464437 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
RPGR-204ENST00000464437 KDM6BO15054 1643 aa10.64□□□□□ -0.71
RPGR-204ENST00000464437 CLIP1P30622 1438 aa10.64□□□□□ -0.71
RPGR-204ENST00000464437 TEX14Q8IWB6 1497 aa10.63□□□□□ -0.71
RPGR-204ENST00000464437 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
RPGR-204ENST00000464437 CDK13Q14004 1512 aaKnown RBP10.63□□□□□ -0.71
RPGR-204ENST00000464437 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
RPGR-204ENST00000464437 CD109Q6YHK3 1445 aa10.62□□□□□ -0.71
RPGR-204ENST00000464437 ATN1P54259 1190 aaPredicted RBP10.62□□□□□ -0.71
RPGR-204ENST00000464437 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
RPGR-204ENST00000464437 ABCA9Q8IUA7 1624 aa10.6□□□□□ -0.71
RPGR-204ENST00000464437 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
RPGR-204ENST00000464437 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
RPGR-204ENST00000464437 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
RPGR-204ENST00000464437 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
RPGR-204ENST00000464437 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
RPGR-204ENST00000464437 FYCO1Q9BQS8 1478 aa10.57□□□□□ -0.72
RPGR-204ENST00000464437 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
RPGR-204ENST00000464437 LOC105371045A0A1W2PR82 267 aa10.56□□□□□ -0.72
RPGR-204ENST00000464437 CDK11AQ9UQ88 783 aaPredicted RBP10.56□□□□□ -0.72
RPGR-204ENST00000464437 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
RPGR-204ENST00000464437 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
RPGR-204ENST00000464437 CCDC61Q9Y6R9 512 aa10.55□□□□□ -0.72
RPGR-204ENST00000464437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPGR-204ENST00000464437 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
RPGR-204ENST00000464437 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
RPGR-204ENST00000464437 COL17A1Q9UMD9 1497 aaPredicted RBP10.54□□□□□ -0.72
RPGR-204ENST00000464437 BMP2KQ9NSY1 1161 aaPredicted RBP10.53□□□□□ -0.72
RPGR-204ENST00000464437 KIF14Q15058 1648 aa10.53□□□□□ -0.72
RPGR-204ENST00000464437 TROQ12816 1431 aaPredicted RBP10.52□□□□□ -0.73
RPGR-204ENST00000464437 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
RPGR-204ENST00000464437 NEO1Q92859 1461 aa10.51□□□□□ -0.73
RPGR-204ENST00000464437 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
RPGR-204ENST00000464437 FANCAO15360 1455 aa10.5□□□□□ -0.73
RPGR-204ENST00000464437 ARAP3Q8WWN8 1544 aa10.5□□□□□ -0.73
RPGR-204ENST00000464437 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
RPGR-204ENST00000464437 MYO5CQ9NQX4 1742 aa10.48□□□□□ -0.73
RPGR-204ENST00000464437 PLCH2O75038 1416 aa10.47□□□□□ -0.73
RPGR-204ENST00000464437 MAP3K13O43283 966 aa10.46□□□□□ -0.73
RPGR-204ENST00000464437 AKNAQ7Z591 1439 aa10.46□□□□□ -0.74
RPGR-204ENST00000464437 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.74
RPGR-204ENST00000464437 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.74
RPGR-204ENST00000464437 MTUS2Q5JR59 1369 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms