RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 ABCC2Q92887 1545 aa29.51■■■□□ 2.31
GCOM1-204ENST00000463717 ABCC5O15440 1437 aa29.5■■■□□ 2.31
GCOM1-204ENST00000463717 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
GCOM1-204ENST00000463717 PREX2Q70Z35 1606 aa29.45■■■□□ 2.31
GCOM1-204ENST00000463717 ERCC6L2Q5T890 1561 aa29.45■■■□□ 2.3
GCOM1-204ENST00000463717 ADGRL2O95490 1459 aa29.44■■■□□ 2.3
GCOM1-204ENST00000463717 KDM6BO15054 1643 aa29.44■■■□□ 2.3
GCOM1-204ENST00000463717 CFDP1Q9UEE9 299 aaPredicted RBP29.43■■■□□ 2.3
GCOM1-204ENST00000463717 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
GCOM1-204ENST00000463717 UHRF1BP1LA0JNW5 1464 aa29.39■■■□□ 2.3
GCOM1-204ENST00000463717 RRP7BPQ9NSQ0 103 aa29.38■■■□□ 2.29
GCOM1-204ENST00000463717 ARHGEF5Q12774 1597 aa29.38■■■□□ 2.29
GCOM1-204ENST00000463717 CHIC2Q9UKJ5 165 aa29.37■■■□□ 2.29
GCOM1-204ENST00000463717 CDC42BPBQ9Y5S2 1711 aa29.35■■■□□ 2.29
GCOM1-204ENST00000463717 ZNF644Q9H582 1327 aaPredicted RBP29.33■■■□□ 2.29
GCOM1-204ENST00000463717 MYO5CQ9NQX4 1742 aa29.32■■■□□ 2.28
GCOM1-204ENST00000463717 ZCCHC11Q5TAX3 1644 aaKnown RBP29.32■■■□□ 2.28
GCOM1-204ENST00000463717 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
GCOM1-204ENST00000463717 NCOA1Q15788 1441 aa29.27■■■□□ 2.28
GCOM1-204ENST00000463717 TONSLQ96HA7 1378 aa29.27■■■□□ 2.28
GCOM1-204ENST00000463717 TTC37Q6PGP7 1564 aa29.27■■■□□ 2.28
GCOM1-204ENST00000463717 DENND4BO75064 1496 aaPredicted RBP29.26■■■□□ 2.27
GCOM1-204ENST00000463717 NEUROD1Q13562 356 aa29.26■■■□□ 2.27
GCOM1-204ENST00000463717 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.27
GCOM1-204ENST00000463717 ANKRD30AQ9BXX3 1397 aa29.25■■■□□ 2.27
GCOM1-204ENST00000463717 KDM5BQ9UGL1 1544 aa29.25■■■□□ 2.27
GCOM1-204ENST00000463717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.24■■■□□ 2.27
GCOM1-204ENST00000463717 C9orf84Q5VXU9 1444 aa29.21■■■□□ 2.27
GCOM1-204ENST00000463717 TRIM52Q96A61 297 aa29.2■■■□□ 2.26
GCOM1-204ENST00000463717 CCDC141Q6ZP82 1450 aa29.19■■■□□ 2.26
GCOM1-204ENST00000463717 ZNF777Q9ULD5 760 aaPredicted RBP29.18■■■□□ 2.26
GCOM1-204ENST00000463717 MAST1Q9Y2H9 1570 aa29.18■■■□□ 2.26
GCOM1-204ENST00000463717 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
GCOM1-204ENST00000463717 ARHGAP5Q13017 1502 aa29.15■■■□□ 2.26
GCOM1-204ENST00000463717 PPP1R15AO75807 674 aaPredicted RBP29.15■■■□□ 2.26
GCOM1-204ENST00000463717 MBD5Q9P267 1494 aa29.15■■■□□ 2.26
GCOM1-204ENST00000463717 MPHOSPH9Q99550 1183 aa29.15■■■□□ 2.26
GCOM1-204ENST00000463717 KDM5DQ9BY66 1539 aa29.12■■■□□ 2.25
GCOM1-204ENST00000463717 PZPP20742 1482 aa29.11■■■□□ 2.25
GCOM1-204ENST00000463717 RSPH4AQ5TD94 716 aa29.11■■■□□ 2.25
GCOM1-204ENST00000463717 ANKRD50Q9ULJ7 1429 aa29.1■■■□□ 2.25
GCOM1-204ENST00000463717 ARAP3Q8WWN8 1544 aa29.09■■■□□ 2.25
GCOM1-204ENST00000463717 SYCP2Q9BX26 1530 aa29.09■■■□□ 2.25
GCOM1-204ENST00000463717 PLXNC1O60486 1568 aa29.07■■■□□ 2.24
GCOM1-204ENST00000463717 KIAA1107Q9UPP5 1409 aa29.07■■■□□ 2.24
GCOM1-204ENST00000463717 RPRD2Q5VT52 1461 aaKnown RBP29.05■■■□□ 2.24
GCOM1-204ENST00000463717 TSPY4P0CV99 314 aa29.05■■■□□ 2.24
GCOM1-204ENST00000463717 TSPY10P0CW01 314 aa29.05■■■□□ 2.24
GCOM1-204ENST00000463717 ANKRD30BQ9BXX2 1392 aa29.04■■■□□ 2.24
GCOM1-204ENST00000463717 KIF15Q9NS87 1388 aa29■■■□□ 2.23
GCOM1-204ENST00000463717 PLCH2O75038 1416 aa29■■■□□ 2.23
GCOM1-204ENST00000463717 ABCC1P33527 1531 aa28.99■■■□□ 2.23
GCOM1-204ENST00000463717 SLC4A1APQ9BWU0 796 aaKnown RBP28.98■■■□□ 2.23
GCOM1-204ENST00000463717 MIER1Q8N108 512 aa28.97■■■□□ 2.23
GCOM1-204ENST00000463717 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
GCOM1-204ENST00000463717 UNC13BO14795 1591 aa28.95■■■□□ 2.22
GCOM1-204ENST00000463717 TEX14Q8IWB6 1497 aa28.94■■■□□ 2.22
GCOM1-204ENST00000463717 HNRNPMP52272 730 aaKnown RBP eCLIP28.93■■■□□ 2.22
GCOM1-204ENST00000463717 ABCA9Q8IUA7 1624 aa28.93■■■□□ 2.22
GCOM1-204ENST00000463717 CENPBP07199 599 aaPredicted RBP28.93■■■□□ 2.22
GCOM1-204ENST00000463717 DUOX2Q9NRD8 1548 aa28.87■■■□□ 2.21
GCOM1-204ENST00000463717 EFCAB2Q5VUJ9 269 aa28.85■■■□□ 2.21
GCOM1-204ENST00000463717 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
GCOM1-204ENST00000463717 ARHGEF12Q9NZN5 1544 aa28.84■■■□□ 2.21
GCOM1-204ENST00000463717 KCNH8Q96L42 1107 aa28.83■■■□□ 2.21
GCOM1-204ENST00000463717 NUP155O75694 1391 aa28.83■■■□□ 2.21
GCOM1-204ENST00000463717 IQGAP3Q86VI3 1631 aa28.82■■■□□ 2.2
GCOM1-204ENST00000463717 FOXD1Q16676 465 aa28.82■■■□□ 2.2
GCOM1-204ENST00000463717 FAM135AQ9P2D6 1515 aa28.81■■■□□ 2.2
GCOM1-204ENST00000463717 ERBINQ96RT1 1412 aa28.81■■■□□ 2.2
GCOM1-204ENST00000463717 MAGI2Q86UL8 1455 aa28.78■■■□□ 2.2
GCOM1-204ENST00000463717 PKD2Q13563 968 aa28.77■■■□□ 2.2
GCOM1-204ENST00000463717 L3MBTL2Q969R5 705 aa28.77■■■□□ 2.2
GCOM1-204ENST00000463717 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
GCOM1-204ENST00000463717 ZFYVE16Q7Z3T8 1539 aa28.75■■■□□ 2.19
GCOM1-204ENST00000463717 ASXL2Q76L83 1435 aa28.74■■■□□ 2.19
GCOM1-204ENST00000463717 CFAP74Q9C0B2 1584 aa28.74■■■□□ 2.19
GCOM1-204ENST00000463717 POLR1AO95602 1720 aaPredicted RBP28.73■■■□□ 2.19
GCOM1-204ENST00000463717 INO80Q9ULG1 1556 aaPredicted RBP28.72■■■□□ 2.19
GCOM1-204ENST00000463717 FANCAO15360 1455 aa28.71■■■□□ 2.19
GCOM1-204ENST00000463717 TRAPPC8Q9Y2L5 1435 aa28.68■■■□□ 2.18
GCOM1-204ENST00000463717 ATP7AQ04656 1500 aa28.64■■■□□ 2.18
GCOM1-204ENST00000463717 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
GCOM1-204ENST00000463717 EIF4G2P78344 907 aaKnown RBP eCLIP28.63■■■□□ 2.17
GCOM1-204ENST00000463717 EIF2AK4Q9P2K8 1649 aaKnown RBP28.63■■■□□ 2.17
GCOM1-204ENST00000463717 UHRF1BP1Q6BDS2 1440 aa28.62■■■□□ 2.17
GCOM1-204ENST00000463717 ADGRL1O94910 1474 aa28.61■■■□□ 2.17
GCOM1-204ENST00000463717 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
GCOM1-204ENST00000463717 NPM1P06748 294 aaKnown RBP eCLIP28.59■■■□□ 2.17
GCOM1-204ENST00000463717 SPAG9O60271 1321 aaKnown RBP28.59■■■□□ 2.17
GCOM1-204ENST00000463717 HSPA5P11021 654 aaKnown RBP28.57■■■□□ 2.16
GCOM1-204ENST00000463717 ATP10AO60312 1499 aa28.56■■■□□ 2.16
GCOM1-204ENST00000463717 RALGAPBQ86X10 1494 aa28.56■■■□□ 2.16
GCOM1-204ENST00000463717 YTHDC1Q96MU7 727 aaKnown RBP28.54■■■□□ 2.16
GCOM1-204ENST00000463717 HIRIP3Q9BW71 556 aaPredicted RBP28.54■■■□□ 2.16
GCOM1-204ENST00000463717 NBPF8Q3BBV2 869 aa28.54■■■□□ 2.16
GCOM1-204ENST00000463717 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
GCOM1-204ENST00000463717 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
GCOM1-204ENST00000463717 TET3O43151 1660 aa28.5■■■□□ 2.15
GCOM1-204ENST00000463717 KDM5CP41229 1560 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms