RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
VAPB-203ENST00000463370 ABCC10Q5T3U5 1492 aa18.69■□□□□ 0.58
VAPB-203ENST00000463370 AKNAQ7Z591 1439 aa18.68■□□□□ 0.58
VAPB-203ENST00000463370 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
VAPB-203ENST00000463370 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
VAPB-203ENST00000463370 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
VAPB-203ENST00000463370 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
VAPB-203ENST00000463370 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
VAPB-203ENST00000463370 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
VAPB-203ENST00000463370 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
VAPB-203ENST00000463370 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
VAPB-203ENST00000463370 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
VAPB-203ENST00000463370 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
VAPB-203ENST00000463370 FOXD1Q16676 465 aa18.53■□□□□ 0.56
VAPB-203ENST00000463370 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.562e-15■■■■■ 26.8
VAPB-203ENST00000463370 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
VAPB-203ENST00000463370 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.55
VAPB-203ENST00000463370 KCNH8Q96L42 1107 aa18.52■□□□□ 0.55
VAPB-203ENST00000463370 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
VAPB-203ENST00000463370 ADGRL2O95490 1459 aa18.51■□□□□ 0.55
VAPB-203ENST00000463370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
VAPB-203ENST00000463370 UHRF1BP1LA0JNW5 1464 aa18.51■□□□□ 0.55
VAPB-203ENST00000463370 CROCC2H7BZ55 1655 aa18.5■□□□□ 0.55
VAPB-203ENST00000463370 TONSLQ96HA7 1378 aa18.49■□□□□ 0.55
VAPB-203ENST00000463370 MBD5Q9P267 1494 aa18.49■□□□□ 0.55
VAPB-203ENST00000463370 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
VAPB-203ENST00000463370 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
VAPB-203ENST00000463370 SAMD9LQ8IVG5 1584 aa18.48■□□□□ 0.55
VAPB-203ENST00000463370 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
VAPB-203ENST00000463370 CDC42BPBQ9Y5S2 1711 aa18.47■□□□□ 0.55
VAPB-203ENST00000463370 PREX2Q70Z35 1606 aa18.47■□□□□ 0.55
VAPB-203ENST00000463370 ANKRD30AQ9BXX3 1397 aa18.47■□□□□ 0.55
VAPB-203ENST00000463370 MIER1Q8N108 512 aa18.47■□□□□ 0.55
VAPB-203ENST00000463370 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
VAPB-203ENST00000463370 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
VAPB-203ENST00000463370 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
VAPB-203ENST00000463370 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 PZPP20742 1482 aa18.43■□□□□ 0.54
VAPB-203ENST00000463370 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
VAPB-203ENST00000463370 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
VAPB-203ENST00000463370 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
VAPB-203ENST00000463370 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
VAPB-203ENST00000463370 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
VAPB-203ENST00000463370 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
VAPB-203ENST00000463370 PLCH2O75038 1416 aa18.37■□□□□ 0.53
VAPB-203ENST00000463370 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
VAPB-203ENST00000463370 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
VAPB-203ENST00000463370 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
VAPB-203ENST00000463370 L3MBTL2Q969R5 705 aa18.34■□□□□ 0.53
VAPB-203ENST00000463370 RSPH4AQ5TD94 716 aa18.33■□□□□ 0.53
VAPB-203ENST00000463370 KIAA1107Q9UPP5 1409 aa18.33■□□□□ 0.52
VAPB-203ENST00000463370 PKD2Q13563 968 aa18.33■□□□□ 0.52
VAPB-203ENST00000463370 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
VAPB-203ENST00000463370 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
VAPB-203ENST00000463370 NUP155O75694 1391 aa18.32■□□□□ 0.52
VAPB-203ENST00000463370 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
VAPB-203ENST00000463370 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
VAPB-203ENST00000463370 TRAPPC8Q9Y2L5 1435 aa18.28■□□□□ 0.52
VAPB-203ENST00000463370 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
VAPB-203ENST00000463370 ASXL2Q76L83 1435 aa18.27■□□□□ 0.52
VAPB-203ENST00000463370 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
VAPB-203ENST00000463370 ABCC1P33527 1531 aa18.26■□□□□ 0.51
VAPB-203ENST00000463370 KDM5DQ9BY66 1539 aa18.25■□□□□ 0.51
VAPB-203ENST00000463370 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
VAPB-203ENST00000463370 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
VAPB-203ENST00000463370 NBPF8Q3BBV2 869 aa18.24■□□□□ 0.51
VAPB-203ENST00000463370 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
VAPB-203ENST00000463370 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
VAPB-203ENST00000463370 ARAP3Q8WWN8 1544 aa18.2■□□□□ 0.5
VAPB-203ENST00000463370 ABCA9Q8IUA7 1624 aa18.2■□□□□ 0.5
VAPB-203ENST00000463370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.51e-8■□□□□ 9
VAPB-203ENST00000463370 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
VAPB-203ENST00000463370 FANCAO15360 1455 aa18.19■□□□□ 0.5
VAPB-203ENST00000463370 HSPA5P11021 654 aaKnown RBP18.17■□□□□ 0.5
VAPB-203ENST00000463370 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
VAPB-203ENST00000463370 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
VAPB-203ENST00000463370 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
VAPB-203ENST00000463370 UNC13BO14795 1591 aa18.14■□□□□ 0.5
VAPB-203ENST00000463370 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
VAPB-203ENST00000463370 ERBINQ96RT1 1412 aa18.13■□□□□ 0.49
VAPB-203ENST00000463370 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
VAPB-203ENST00000463370 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
VAPB-203ENST00000463370 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
VAPB-203ENST00000463370 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
VAPB-203ENST00000463370 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
VAPB-203ENST00000463370 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
VAPB-203ENST00000463370 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
VAPB-203ENST00000463370 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
VAPB-203ENST00000463370 MAGI2Q86UL8 1455 aa18.09■□□□□ 0.49
VAPB-203ENST00000463370 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
VAPB-203ENST00000463370 IQGAP3Q86VI3 1631 aa18.07■□□□□ 0.48
VAPB-203ENST00000463370 C11orf95C9JLR9 678 aaPredicted RBP18.07■□□□□ 0.48
VAPB-203ENST00000463370 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
VAPB-203ENST00000463370 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
VAPB-203ENST00000463370 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
VAPB-203ENST00000463370 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms