RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PTPRGP23470 1445 aa12.52□□□□□ -0.41
SHQ1-203ENST00000463369 CFAP43Q8NDM7 1665 aa12.52□□□□□ -0.41
SHQ1-203ENST00000463369 ABCA8O94911 1581 aa12.52□□□□□ -0.41
SHQ1-203ENST00000463369 MAP3K1Q13233 1512 aa12.5□□□□□ -0.41
SHQ1-203ENST00000463369 MSH5O43196 834 aa12.5□□□□□ -0.41
SHQ1-203ENST00000463369 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
SHQ1-203ENST00000463369 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
SHQ1-203ENST00000463369 ARHGEF11O15085 1522 aa12.48□□□□□ -0.41
SHQ1-203ENST00000463369 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
SHQ1-203ENST00000463369 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
SHQ1-203ENST00000463369 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
SHQ1-203ENST00000463369 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
SHQ1-203ENST00000463369 NUP153P49790 1475 aaKnown RBP12.47□□□□□ -0.41
SHQ1-203ENST00000463369 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
SHQ1-203ENST00000463369 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
SHQ1-203ENST00000463369 UACAQ9BZF9 1416 aa12.46□□□□□ -0.42
SHQ1-203ENST00000463369 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
SHQ1-203ENST00000463369 ABCC2Q92887 1545 aa12.44□□□□□ -0.42
SHQ1-203ENST00000463369 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
SHQ1-203ENST00000463369 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
SHQ1-203ENST00000463369 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
SHQ1-203ENST00000463369 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
SHQ1-203ENST00000463369 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
SHQ1-203ENST00000463369 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
SHQ1-203ENST00000463369 PKD2Q13563 968 aa12.41□□□□□ -0.42
SHQ1-203ENST00000463369 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
SHQ1-203ENST00000463369 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
SHQ1-203ENST00000463369 ATP10BO94823 1461 aa12.4□□□□□ -0.42
SHQ1-203ENST00000463369 MAGI3Q5TCQ9 1506 aa12.38□□□□□ -0.43
SHQ1-203ENST00000463369 KDM5BQ9UGL1 1544 aa12.38□□□□□ -0.43
SHQ1-203ENST00000463369 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
SHQ1-203ENST00000463369 EHBP1L1Q8N3D4 1523 aa12.37□□□□□ -0.43
SHQ1-203ENST00000463369 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
SHQ1-203ENST00000463369 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
SHQ1-203ENST00000463369 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
SHQ1-203ENST00000463369 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
SHQ1-203ENST00000463369 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
SHQ1-203ENST00000463369 TROQ12816 1431 aaPredicted RBP12.32□□□□□ -0.44
SHQ1-203ENST00000463369 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
SHQ1-203ENST00000463369 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
SHQ1-203ENST00000463369 KIF14Q15058 1648 aa12.3□□□□□ -0.44
SHQ1-203ENST00000463369 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
SHQ1-203ENST00000463369 IGSF3O75054 1194 aa12.28□□□□□ -0.44
SHQ1-203ENST00000463369 CDC42BPAQ5VT25 1732 aa12.28□□□□□ -0.44
SHQ1-203ENST00000463369 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SHQ1-203ENST00000463369 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
SHQ1-203ENST00000463369 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
SHQ1-203ENST00000463369 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
SHQ1-203ENST00000463369 WDR7Q9Y4E6 1490 aa12.25□□□□□ -0.45
SHQ1-203ENST00000463369 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
SHQ1-203ENST00000463369 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
SHQ1-203ENST00000463369 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
SHQ1-203ENST00000463369 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
SHQ1-203ENST00000463369 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
SHQ1-203ENST00000463369 ABCC10Q5T3U5 1492 aa12.24□□□□□ -0.45
SHQ1-203ENST00000463369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHQ1-203ENST00000463369 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
SHQ1-203ENST00000463369 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
SHQ1-203ENST00000463369 TTC37Q6PGP7 1564 aa12.22□□□□□ -0.45
SHQ1-203ENST00000463369 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
SHQ1-203ENST00000463369 PREX2Q70Z35 1606 aa12.21□□□□□ -0.45
SHQ1-203ENST00000463369 ABCA9Q8IUA7 1624 aa12.21□□□□□ -0.45
SHQ1-203ENST00000463369 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
SHQ1-203ENST00000463369 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
SHQ1-203ENST00000463369 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
SHQ1-203ENST00000463369 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
SHQ1-203ENST00000463369 GPATCH8Q9UKJ3 1502 aaKnown RBP12.2□□□□□ -0.46
SHQ1-203ENST00000463369 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
SHQ1-203ENST00000463369 ARID3AQ99856 593 aa12.2□□□□□ -0.46
SHQ1-203ENST00000463369 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
SHQ1-203ENST00000463369 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
SHQ1-203ENST00000463369 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
SHQ1-203ENST00000463369 DHX57Q6P158 1386 aaKnown RBP12.17□□□□□ -0.46
SHQ1-203ENST00000463369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHQ1-203ENST00000463369 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
SHQ1-203ENST00000463369 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
SHQ1-203ENST00000463369 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
SHQ1-203ENST00000463369 GLI2P10070 1586 aa12.15□□□□□ -0.46
SHQ1-203ENST00000463369 ARAP3Q8WWN8 1544 aa12.15□□□□□ -0.46
SHQ1-203ENST00000463369 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
SHQ1-203ENST00000463369 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
SHQ1-203ENST00000463369 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
SHQ1-203ENST00000463369 PLCH2O75038 1416 aa12.14□□□□□ -0.47
SHQ1-203ENST00000463369 NEFLP07196 543 aa12.14□□□□□ -0.47
SHQ1-203ENST00000463369 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
SHQ1-203ENST00000463369 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
SHQ1-203ENST00000463369 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
SHQ1-203ENST00000463369 ARHGAP5Q13017 1502 aa12.12□□□□□ -0.47
SHQ1-203ENST00000463369 CNKSR2Q8WXI2 1034 aa12.12□□□□□ -0.47
SHQ1-203ENST00000463369 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
SHQ1-203ENST00000463369 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
SHQ1-203ENST00000463369 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SHQ1-203ENST00000463369 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
SHQ1-203ENST00000463369 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
SHQ1-203ENST00000463369 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
SHQ1-203ENST00000463369 CROCC2H7BZ55 1655 aa12.1□□□□□ -0.47
SHQ1-203ENST00000463369 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
SHQ1-203ENST00000463369 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
SHQ1-203ENST00000463369 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
SHQ1-203ENST00000463369 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms