RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ARHGAP35Q9NRY4 1499 aa34.47■■■■□ 3.11
CPSF7-209ENST00000463244 MYO5CQ9NQX4 1742 aa34.46■■■■□ 3.11
CPSF7-209ENST00000463244 EHMT2Q96KQ7 1210 aa34.44■■■■□ 3.1
CPSF7-209ENST00000463244 ATP1B4Q9UN42 357 aaPredicted RBP34.43■■■■□ 3.1
CPSF7-209ENST00000463244 FER1L4A9Z1Z3 1794 aa34.41■■■■□ 3.1
CPSF7-209ENST00000463244 EFCAB2Q5VUJ9 269 aa34.39■■■■□ 3.1
CPSF7-209ENST00000463244 CDK11AQ9UQ88 783 aaPredicted RBP34.39■■■■□ 3.1
CPSF7-209ENST00000463244 KIF14Q15058 1648 aa34.39■■■■□ 3.1
CPSF7-209ENST00000463244 MLECQ14165 292 aa34.38■■■■□ 3.09
CPSF7-209ENST00000463244 PLPPR3Q6T4P5 718 aa34.38■■■■□ 3.09
CPSF7-209ENST00000463244 ATP10AO60312 1499 aa34.37■■■■□ 3.09
CPSF7-209ENST00000463244 HSPA2P54652 639 aa34.36■■■■□ 3.09
CPSF7-209ENST00000463244 TROQ12816 1431 aaPredicted RBP34.34■■■■□ 3.09
CPSF7-209ENST00000463244 C9orf84Q5VXU9 1444 aa34.34■■■■□ 3.09
CPSF7-209ENST00000463244 ARHGEF12Q9NZN5 1544 aa34.33■■■■□ 3.09
CPSF7-209ENST00000463244 LRRIQ1Q96JM4 1722 aa34.31■■■■□ 3.08
CPSF7-209ENST00000463244 ZNF518AQ6AHZ1 1483 aa34.29■■■■□ 3.08
CPSF7-209ENST00000463244 ARHGAP5Q13017 1502 aa34.28■■■■□ 3.08
CPSF7-209ENST00000463244 CHIC1Q5VXU3 224 aa34.27■■■■□ 3.08
CPSF7-209ENST00000463244 KDM5CP41229 1560 aa34.27■■■■□ 3.08
CPSF7-209ENST00000463244 CLIP1P30622 1438 aa34.26■■■■□ 3.07
CPSF7-209ENST00000463244 AFAP1Q8N556 730 aa34.21■■■■□ 3.07
CPSF7-209ENST00000463244 CDC42BPBQ9Y5S2 1711 aa34.2■■■■□ 3.07
CPSF7-209ENST00000463244 PREX1Q8TCU6 1659 aa34.19■■■■□ 3.06
CPSF7-209ENST00000463244 DIP2CQ9Y2E4 1556 aa34.15■■■■□ 3.06
CPSF7-209ENST00000463244 REREQ9P2R6 1566 aa34.14■■■■□ 3.06
CPSF7-209ENST00000463244 PREX2Q70Z35 1606 aa34.13■■■■□ 3.05
CPSF7-209ENST00000463244 CEBPAP49715 358 aaPredicted RBP34.12■■■■□ 3.05
CPSF7-209ENST00000463244 CCDC18Q5T9S5 1454 aa34.12■■■■□ 3.05
CPSF7-209ENST00000463244 CASKIN1Q8WXD9 1431 aa34.12■■■■□ 3.05
CPSF7-209ENST00000463244 MLH3Q9UHC1 1453 aa34.1■■■■□ 3.05
CPSF7-209ENST00000463244 ABCA6Q8N139 1617 aa34.1■■■■□ 3.05
CPSF7-209ENST00000463244 ABCC1P33527 1531 aa34.09■■■■□ 3.05
CPSF7-209ENST00000463244 MYT1LQ9UL68 1186 aa34.08■■■■□ 3.05
CPSF7-209ENST00000463244 SETD1BQ9UPS6 1966 aaKnown RBP34.08■■■■□ 3.05
CPSF7-209ENST00000463244 CERKQ8TCT0 537 aa34.06■■■■□ 3.04
CPSF7-209ENST00000463244 ITSN2Q9NZM3 1697 aa34.05■■■■□ 3.04
CPSF7-209ENST00000463244 TRAPPC8Q9Y2L5 1435 aa34.04■■■■□ 3.04
CPSF7-209ENST00000463244 CDC42BPAQ5VT25 1732 aa34.01■■■■□ 3.04
CPSF7-209ENST00000463244 AGLP35573 1532 aa34.01■■■■□ 3.04
CPSF7-209ENST00000463244 UHRF1BP1Q6BDS2 1440 aa34.01■■■■□ 3.03
CPSF7-209ENST00000463244 STRCQ7RTU9 1775 aa34■■■■□ 3.03
CPSF7-209ENST00000463244 C3P01024 1663 aa33.97■■■■□ 3.03
CPSF7-209ENST00000463244 KIDINS220Q9ULH0 1771 aa33.97■■■■□ 3.03
CPSF7-209ENST00000463244 FYCO1Q9BQS8 1478 aa33.96■■■■□ 3.03
CPSF7-209ENST00000463244 DMRT2Q9Y5R5 561 aa33.92■■■■□ 3.02
CPSF7-209ENST00000463244 ESF1Q9H501 851 aaKnown RBP33.88■■■■□ 3.01
CPSF7-209ENST00000463244 SAMD9LQ8IVG5 1584 aa33.87■■■■□ 3.01
CPSF7-209ENST00000463244 CNTLNQ9NXG0 1405 aa33.84■■■■□ 3.01
CPSF7-209ENST00000463244 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
CPSF7-209ENST00000463244 SYCP2Q9BX26 1530 aa33.83■■■■□ 3.01
CPSF7-209ENST00000463244 ZNF777Q9ULD5 760 aaPredicted RBP33.81■■■■□ 3
CPSF7-209ENST00000463244 PTPRTO14522 1441 aa33.79■■■■□ 3
CPSF7-209ENST00000463244 MROH2AA6NES4 1674 aa33.76■■■□□ 2.99
CPSF7-209ENST00000463244 SPAG9O60271 1321 aaKnown RBP33.75■■■□□ 2.99
CPSF7-209ENST00000463244 HNRNPMP52272 730 aaKnown RBP eCLIP33.74■■■□□ 2.99
CPSF7-209ENST00000463244 KIAA1107Q9UPP5 1409 aa33.73■■■□□ 2.99
CPSF7-209ENST00000463244 SUPT6HQ7KZ85 1726 aaKnown RBP33.72■■■□□ 2.99
CPSF7-209ENST00000463244 ATP7AQ04656 1500 aa33.72■■■□□ 2.99
CPSF7-209ENST00000463244 NPATQ14207 1427 aa33.71■■■□□ 2.99
CPSF7-209ENST00000463244 PLEKHH2Q8IVE3 1493 aa33.7■■■□□ 2.99
CPSF7-209ENST00000463244 INO80Q9ULG1 1556 aaPredicted RBP33.7■■■□□ 2.99
CPSF7-209ENST00000463244 NCOA1Q15788 1441 aa33.7■■■□□ 2.98
CPSF7-209ENST00000463244 CFDP1Q9UEE9 299 aaPredicted RBP33.69■■■□□ 2.98
CPSF7-209ENST00000463244 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
CPSF7-209ENST00000463244 ZMYM3Q14202 1370 aa33.67■■■□□ 2.98
CPSF7-209ENST00000463244 CCNB3Q8WWL7 1395 aa33.67■■■□□ 2.98
CPSF7-209ENST00000463244 LTBP4Q8N2S1 1624 aa33.64■■■□□ 2.98
CPSF7-209ENST00000463244 A2MP01023 1474 aa33.63■■■□□ 2.97
CPSF7-209ENST00000463244 MTUS2Q5JR59 1369 aa33.62■■■□□ 2.97
CPSF7-209ENST00000463244 CLTCQ00610 1675 aaKnown RBP33.62■■■□□ 2.97
CPSF7-209ENST00000463244 CAMSAP1Q5T5Y3 1602 aa33.61■■■□□ 2.97
CPSF7-209ENST00000463244 TIAM1Q13009 1591 aa33.55■■■□□ 2.96
CPSF7-209ENST00000463244 ADGBQ8N7X0 1667 aa33.55■■■□□ 2.96
CPSF7-209ENST00000463244 IQSEC2Q5JU85 1478 aa33.55■■■□□ 2.96
CPSF7-209ENST00000463244 ZNF142P52746 1687 aaPredicted RBP33.55■■■□□ 2.96
CPSF7-209ENST00000463244 MYO3AQ8NEV4 1616 aa33.53■■■□□ 2.96
CPSF7-209ENST00000463244 EHBP1L1Q8N3D4 1523 aa33.52■■■□□ 2.96
CPSF7-209ENST00000463244 PTPRKQ15262 1439 aa33.52■■■□□ 2.96
CPSF7-209ENST00000463244 GGT6Q6P531 493 aa33.51■■■□□ 2.95
CPSF7-209ENST00000463244 ZNF644Q9H582 1327 aaPredicted RBP33.51■■■□□ 2.95
CPSF7-209ENST00000463244 MBD5Q9P267 1494 aa33.5■■■□□ 2.95
CPSF7-209ENST00000463244 CEP170BQ9Y4F5 1589 aaPredicted RBP33.48■■■□□ 2.95
CPSF7-209ENST00000463244 PPP6R1Q9UPN7 881 aa33.48■■■□□ 2.95
CPSF7-209ENST00000463244 PLA2R1Q13018 1463 aa33.47■■■□□ 2.95
CPSF7-209ENST00000463244 NCKAP5LQ9HCH0 1330 aa33.47■■■□□ 2.95
CPSF7-209ENST00000463244 DISP3Q9P2K9 1392 aa33.47■■■□□ 2.95
CPSF7-209ENST00000463244 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
CPSF7-209ENST00000463244 RTEL1-TNFRSF6BF6WH68 1400 aa33.45■■■□□ 2.94
CPSF7-209ENST00000463244 PKD2Q13563 968 aa33.42■■■□□ 2.94
CPSF7-209ENST00000463244 TCOF1Q13428 1488 aaKnown RBP33.42■■■□□ 2.94
CPSF7-209ENST00000463244 ZNF335Q9H4Z2 1342 aaPredicted RBP33.38■■■□□ 2.93
CPSF7-209ENST00000463244 DHX29Q7Z478 1369 aaKnown RBP33.37■■■□□ 2.93
CPSF7-209ENST00000463244 ILDR2Q71H61 639 aa33.36■■■□□ 2.93
CPSF7-209ENST00000463244 SPATA31D1Q6ZQQ2 1576 aa33.34■■■□□ 2.93
CPSF7-209ENST00000463244 A2ML1A8K2U0 1454 aa33.33■■■□□ 2.93
CPSF7-209ENST00000463244 CCDC141Q6ZP82 1450 aa33.32■■■□□ 2.92
CPSF7-209ENST00000463244 DNMT1P26358 1616 aaKnown RBP33.31■■■□□ 2.92
CPSF7-209ENST00000463244 NCOA2Q15596 1464 aa33.31■■■□□ 2.92
CPSF7-209ENST00000463244 CAMSAP2Q08AD1 1489 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms