RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ABCC10Q5T3U5 1492 aa14.79□□□□□ -0.04
MSH5-211ENST00000463144 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
MSH5-211ENST00000463144 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
MSH5-211ENST00000463144 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
MSH5-211ENST00000463144 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
MSH5-211ENST00000463144 ROCK1Q13464 1354 aa14.77□□□□□ -0.05
MSH5-211ENST00000463144 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
MSH5-211ENST00000463144 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
MSH5-211ENST00000463144 ZNF777Q9ULD5 760 aaPredicted RBP14.73□□□□□ -0.05
MSH5-211ENST00000463144 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
MSH5-211ENST00000463144 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
MSH5-211ENST00000463144 PPP1R15AO75807 674 aaPredicted RBP14.71□□□□□ -0.06
MSH5-211ENST00000463144 TRIM52Q96A61 297 aa14.71□□□□□ -0.06
MSH5-211ENST00000463144 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
MSH5-211ENST00000463144 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
MSH5-211ENST00000463144 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
MSH5-211ENST00000463144 MIER1Q8N108 512 aa14.68□□□□□ -0.06
MSH5-211ENST00000463144 MPHOSPH9Q99550 1183 aa14.68□□□□□ -0.06
MSH5-211ENST00000463144 ADGRL2O95490 1459 aa14.68□□□□□ -0.06
MSH5-211ENST00000463144 CDC42BPBQ9Y5S2 1711 aa14.67□□□□□ -0.06
MSH5-211ENST00000463144 TONSLQ96HA7 1378 aa14.66□□□□□ -0.06
MSH5-211ENST00000463144 PREX2Q70Z35 1606 aa14.65□□□□□ -0.06
MSH5-211ENST00000463144 KDM5BQ9UGL1 1544 aa14.65□□□□□ -0.06
MSH5-211ENST00000463144 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
MSH5-211ENST00000463144 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
MSH5-211ENST00000463144 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
MSH5-211ENST00000463144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
MSH5-211ENST00000463144 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
MSH5-211ENST00000463144 FOXD1Q16676 465 aa14.63□□□□□ -0.07
MSH5-211ENST00000463144 MBD5Q9P267 1494 aa14.63□□□□□ -0.07
MSH5-211ENST00000463144 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
MSH5-211ENST00000463144 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
MSH5-211ENST00000463144 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
MSH5-211ENST00000463144 ANKRD30AQ9BXX3 1397 aa14.62□□□□□ -0.07
MSH5-211ENST00000463144 ARHGEF5Q12774 1597 aa14.61□□□□□ -0.07
MSH5-211ENST00000463144 C9orf84Q5VXU9 1444 aa14.61□□□□□ -0.07
MSH5-211ENST00000463144 PZPP20742 1482 aa14.6□□□□□ -0.07
MSH5-211ENST00000463144 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
MSH5-211ENST00000463144 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
MSH5-211ENST00000463144 MYO5CQ9NQX4 1742 aa14.57□□□□□ -0.08
MSH5-211ENST00000463144 ANKRD50Q9ULJ7 1429 aa14.57□□□□□ -0.08
MSH5-211ENST00000463144 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
MSH5-211ENST00000463144 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
MSH5-211ENST00000463144 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
MSH5-211ENST00000463144 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
MSH5-211ENST00000463144 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
MSH5-211ENST00000463144 SYCP2Q9BX26 1530 aa14.54□□□□□ -0.08
MSH5-211ENST00000463144 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
MSH5-211ENST00000463144 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
MSH5-211ENST00000463144 RPRD2Q5VT52 1461 aaKnown RBP14.54□□□□□ -0.08
MSH5-211ENST00000463144 RSPH4AQ5TD94 716 aa14.52□□□□□ -0.08
MSH5-211ENST00000463144 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.08
MSH5-211ENST00000463144 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
MSH5-211ENST00000463144 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
MSH5-211ENST00000463144 KIF15Q9NS87 1388 aa14.52□□□□□ -0.09
MSH5-211ENST00000463144 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
MSH5-211ENST00000463144 PLCH2O75038 1416 aa14.52□□□□□ -0.09
MSH5-211ENST00000463144 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
MSH5-211ENST00000463144 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
MSH5-211ENST00000463144 KIAA1107Q9UPP5 1409 aa14.5□□□□□ -0.09
MSH5-211ENST00000463144 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
MSH5-211ENST00000463144 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
MSH5-211ENST00000463144 PKD2Q13563 968 aa14.49□□□□□ -0.09
MSH5-211ENST00000463144 NUP155O75694 1391 aa14.48□□□□□ -0.09
MSH5-211ENST00000463144 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
MSH5-211ENST00000463144 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
MSH5-211ENST00000463144 YTHDC1Q96MU7 727 aaKnown RBP14.47□□□□□ -0.09
MSH5-211ENST00000463144 CENPBP07199 599 aaPredicted RBP14.46□□□□□ -0.09
MSH5-211ENST00000463144 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
MSH5-211ENST00000463144 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
MSH5-211ENST00000463144 ABCC1P33527 1531 aa14.45□□□□□ -0.1
MSH5-211ENST00000463144 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
MSH5-211ENST00000463144 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
MSH5-211ENST00000463144 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
MSH5-211ENST00000463144 ARAP3Q8WWN8 1544 aa14.43□□□□□ -0.1
MSH5-211ENST00000463144 TRAPPC8Q9Y2L5 1435 aa14.42□□□□□ -0.1
MSH5-211ENST00000463144 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
MSH5-211ENST00000463144 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
MSH5-211ENST00000463144 UNC13BO14795 1591 aa14.4□□□□□ -0.1
MSH5-211ENST00000463144 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
MSH5-211ENST00000463144 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
MSH5-211ENST00000463144 DUOX2Q9NRD8 1548 aa14.39□□□□□ -0.11
MSH5-211ENST00000463144 EIF4G2P78344 907 aaKnown RBP eCLIP14.37□□□□□ -0.11
MSH5-211ENST00000463144 AFAP1Q8N556 730 aa14.36□□□□□ -0.11
MSH5-211ENST00000463144 FANCAO15360 1455 aa14.35□□□□□ -0.11
MSH5-211ENST00000463144 IQGAP3Q86VI3 1631 aa14.35□□□□□ -0.11
MSH5-211ENST00000463144 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
MSH5-211ENST00000463144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.114e-7■■□□□ 12.9
MSH5-211ENST00000463144 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
MSH5-211ENST00000463144 MAGI2Q86UL8 1455 aa14.34□□□□□ -0.11
MSH5-211ENST00000463144 RTEL1-TNFRSF6BF6WH68 1400 aa14.34□□□□□ -0.11
MSH5-211ENST00000463144 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.11
MSH5-211ENST00000463144 ZFYVE16Q7Z3T8 1539 aa14.33□□□□□ -0.11
MSH5-211ENST00000463144 SPATA31E1Q6ZUB1 1445 aa14.33□□□□□ -0.12
MSH5-211ENST00000463144 PLA2R1Q13018 1463 aa14.32□□□□□ -0.12
MSH5-211ENST00000463144 C11orf95C9JLR9 678 aaPredicted RBP14.32□□□□□ -0.12
MSH5-211ENST00000463144 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
MSH5-211ENST00000463144 UHRF1BP1Q6BDS2 1440 aa14.31□□□□□ -0.12
MSH5-211ENST00000463144 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
MSH5-211ENST00000463144 SCAPERQ9BY12 1400 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms