RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 PLCH2O75038 1416 aa21.44■■□□□ 1.02
COL4A2-204ENST00000463084 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
COL4A2-204ENST00000463084 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
COL4A2-204ENST00000463084 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
COL4A2-204ENST00000463084 ARHGAP35Q9NRY4 1499 aa21.42■■□□□ 1.02
COL4A2-204ENST00000463084 MAGI2Q86UL8 1455 aa21.4■■□□□ 1.02
COL4A2-204ENST00000463084 HSPA2P54652 639 aa21.4■■□□□ 1.02
COL4A2-204ENST00000463084 FBXO41Q8TF61 875 aa21.4■■□□□ 1.02
COL4A2-204ENST00000463084 CLIP1P30622 1438 aa21.39■■□□□ 1.02
COL4A2-204ENST00000463084 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.01
COL4A2-204ENST00000463084 KIF14Q15058 1648 aa21.37■■□□□ 1.01
COL4A2-204ENST00000463084 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
COL4A2-204ENST00000463084 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
COL4A2-204ENST00000463084 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
COL4A2-204ENST00000463084 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
COL4A2-204ENST00000463084 ATP10AO60312 1499 aa21.32■■□□□ 1
COL4A2-204ENST00000463084 AFAP1Q8N556 730 aa21.3■■□□□ 1
COL4A2-204ENST00000463084 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
COL4A2-204ENST00000463084 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
COL4A2-204ENST00000463084 FER1L4A9Z1Z3 1794 aa21.29■■□□□ 1
COL4A2-204ENST00000463084 ESF1Q9H501 851 aaKnown RBP21.26■□□□□ 0.99
COL4A2-204ENST00000463084 CEBPAP49715 358 aaPredicted RBP21.25■□□□□ 0.99
COL4A2-204ENST00000463084 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
COL4A2-204ENST00000463084 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
COL4A2-204ENST00000463084 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
COL4A2-204ENST00000463084 CASKIN1Q8WXD9 1431 aa21.21■□□□□ 0.99
COL4A2-204ENST00000463084 KDM5CP41229 1560 aa21.18■□□□□ 0.98
COL4A2-204ENST00000463084 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
COL4A2-204ENST00000463084 DIP2CQ9Y2E4 1556 aa21.15■□□□□ 0.98
COL4A2-204ENST00000463084 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
COL4A2-204ENST00000463084 TRAPPC8Q9Y2L5 1435 aa21.15■□□□□ 0.98
COL4A2-204ENST00000463084 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
COL4A2-204ENST00000463084 CERKQ8TCT0 537 aa21.14■□□□□ 0.97
COL4A2-204ENST00000463084 ABCC1P33527 1531 aa21.14■□□□□ 0.97
COL4A2-204ENST00000463084 CDC42BPBQ9Y5S2 1711 aa21.13■□□□□ 0.97
COL4A2-204ENST00000463084 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
COL4A2-204ENST00000463084 PREX1Q8TCU6 1659 aa21.12■□□□□ 0.97
COL4A2-204ENST00000463084 MLH3Q9UHC1 1453 aa21.12■□□□□ 0.97
COL4A2-204ENST00000463084 ABCA6Q8N139 1617 aa21.11■□□□□ 0.97
COL4A2-204ENST00000463084 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
COL4A2-204ENST00000463084 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
COL4A2-204ENST00000463084 SPAG9O60271 1321 aaKnown RBP21.06■□□□□ 0.96
COL4A2-204ENST00000463084 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
COL4A2-204ENST00000463084 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL4A2-204ENST00000463084 CFDP1Q9UEE9 299 aaPredicted RBP21.05■□□□□ 0.96
COL4A2-204ENST00000463084 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
COL4A2-204ENST00000463084 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
COL4A2-204ENST00000463084 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
COL4A2-204ENST00000463084 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
COL4A2-204ENST00000463084 AGLP35573 1532 aa21.03■□□□□ 0.96
COL4A2-204ENST00000463084 CNTLNQ9NXG0 1405 aa21.01■□□□□ 0.95
COL4A2-204ENST00000463084 SAMD9LQ8IVG5 1584 aa21.01■□□□□ 0.95
COL4A2-204ENST00000463084 GPATCH8Q9UKJ3 1502 aaKnown RBP21■□□□□ 0.95
COL4A2-204ENST00000463084 KIDINS220Q9ULH0 1771 aa21■□□□□ 0.95
COL4A2-204ENST00000463084 C3P01024 1663 aa20.99■□□□□ 0.95
COL4A2-204ENST00000463084 PLEKHH2Q8IVE3 1493 aa20.97■□□□□ 0.95
COL4A2-204ENST00000463084 GGT6Q6P531 493 aa20.95■□□□□ 0.94
COL4A2-204ENST00000463084 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
COL4A2-204ENST00000463084 SUPT6HQ7KZ85 1726 aaKnown RBP20.93■□□□□ 0.94
COL4A2-204ENST00000463084 SETD1BQ9UPS6 1966 aaKnown RBP20.93■□□□□ 0.94
COL4A2-204ENST00000463084 STRCQ7RTU9 1775 aa20.92■□□□□ 0.94
COL4A2-204ENST00000463084 ZMYM3Q14202 1370 aa20.92■□□□□ 0.94
COL4A2-204ENST00000463084 A2MP01023 1474 aa20.91■□□□□ 0.94
COL4A2-204ENST00000463084 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
COL4A2-204ENST00000463084 PTPRTO14522 1441 aa20.9■□□□□ 0.94
COL4A2-204ENST00000463084 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
COL4A2-204ENST00000463084 NPATQ14207 1427 aa20.87■□□□□ 0.93
COL4A2-204ENST00000463084 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
COL4A2-204ENST00000463084 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
COL4A2-204ENST00000463084 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
COL4A2-204ENST00000463084 CAMSAP1Q5T5Y3 1602 aa20.86■□□□□ 0.93
COL4A2-204ENST00000463084 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
COL4A2-204ENST00000463084 NCKAP5LQ9HCH0 1330 aa20.84■□□□□ 0.93
COL4A2-204ENST00000463084 MROH2AA6NES4 1674 aa20.84■□□□□ 0.93
COL4A2-204ENST00000463084 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
COL4A2-204ENST00000463084 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
COL4A2-204ENST00000463084 DISP3Q9P2K9 1392 aa20.84■□□□□ 0.93
COL4A2-204ENST00000463084 PLXNC1O60486 1568 aa20.81■□□□□ 0.92
COL4A2-204ENST00000463084 ADGBQ8N7X0 1667 aa20.78■□□□□ 0.92
COL4A2-204ENST00000463084 PTPRKQ15262 1439 aa20.78■□□□□ 0.92
COL4A2-204ENST00000463084 KIF3BO15066 747 aa20.77■□□□□ 0.92
COL4A2-204ENST00000463084 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.92
COL4A2-204ENST00000463084 ZNF335Q9H4Z2 1342 aaPredicted RBP20.77■□□□□ 0.91
COL4A2-204ENST00000463084 PKD2Q13563 968 aa20.76■□□□□ 0.91
COL4A2-204ENST00000463084 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
COL4A2-204ENST00000463084 MBD5Q9P267 1494 aa20.75■□□□□ 0.91
COL4A2-204ENST00000463084 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
COL4A2-204ENST00000463084 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
COL4A2-204ENST00000463084 LTBP4Q8N2S1 1624 aa20.75■□□□□ 0.91
COL4A2-204ENST00000463084 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
COL4A2-204ENST00000463084 RTEL1-TNFRSF6BF6WH68 1400 aa20.74■□□□□ 0.91
COL4A2-204ENST00000463084 CAMSAP2Q08AD1 1489 aa20.74■□□□□ 0.91
COL4A2-204ENST00000463084 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
COL4A2-204ENST00000463084 UBAP1LF5GYI3 381 aa20.73■□□□□ 0.91
COL4A2-204ENST00000463084 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
COL4A2-204ENST00000463084 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
COL4A2-204ENST00000463084 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
COL4A2-204ENST00000463084 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.91
COL4A2-204ENST00000463084 PLA2R1Q13018 1463 aa20.7■□□□□ 0.9
COL4A2-204ENST00000463084 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms