RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
SMC4-204ENST00000462787 PLEKHD1A6NEE1 506 aa20.12■□□□□ 0.81
SMC4-204ENST00000462787 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
SMC4-204ENST00000462787 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
SMC4-204ENST00000462787 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
SMC4-204ENST00000462787 FAM161AQ3B820 660 aa20.1■□□□□ 0.81
SMC4-204ENST00000462787 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
SMC4-204ENST00000462787 VSIG10Q8N0Z9 540 aa20.09■□□□□ 0.81
SMC4-204ENST00000462787 PLCB2Q00722 1185 aa20.09■□□□□ 0.81
SMC4-204ENST00000462787 CENPQQ7L2Z9 268 aaPredicted RBP20.09■□□□□ 0.81
SMC4-204ENST00000462787 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
SMC4-204ENST00000462787 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
SMC4-204ENST00000462787 PMFBP1Q8TBY8 1022 aa20.08■□□□□ 0.81
SMC4-204ENST00000462787 L3MBTL2Q969R5 705 aa20.08■□□□□ 0.8
SMC4-204ENST00000462787 ZRSR1Q15695 479 aaKnown RBP20.06■□□□□ 0.8
SMC4-204ENST00000462787 PHLDB1Q86UU1 1377 aa20.06■□□□□ 0.8
SMC4-204ENST00000462787 STAG3Q9UJ98 1225 aa20.05■□□□□ 0.8
SMC4-204ENST00000462787 CUX2O14529 1486 aa20.04■□□□□ 0.8
SMC4-204ENST00000462787 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
SMC4-204ENST00000462787 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
SMC4-204ENST00000462787 GOLGA6L6A8MZA4 724 aa20.03■□□□□ 0.8
SMC4-204ENST00000462787 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
SMC4-204ENST00000462787 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
SMC4-204ENST00000462787 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
SMC4-204ENST00000462787 GOLGA2Q08379 1002 aa20.02■□□□□ 0.8
SMC4-204ENST00000462787 KIF15Q9NS87 1388 aa20.02■□□□□ 0.79
SMC4-204ENST00000462787 MYBBP1AQ9BQG0 1328 aaKnown RBP20■□□□□ 0.79
SMC4-204ENST00000462787 FOXD1Q16676 465 aa20■□□□□ 0.79
SMC4-204ENST00000462787 NRDCO43847 1150 aa19.99■□□□□ 0.79
SMC4-204ENST00000462787 SLC4A3P48751 1232 aa19.99■□□□□ 0.79
SMC4-204ENST00000462787 PKD2Q13563 968 aa19.98■□□□□ 0.79
SMC4-204ENST00000462787 ANO8Q9HCE9 1232 aaPredicted RBP19.98■□□□□ 0.79
SMC4-204ENST00000462787 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
SMC4-204ENST00000462787 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
SMC4-204ENST00000462787 WIZO95785 1651 aa19.96■□□□□ 0.79
SMC4-204ENST00000462787 MCCP23508 829 aa19.96■□□□□ 0.79
SMC4-204ENST00000462787 SYAP1Q96A49 352 aaPredicted RBP19.95■□□□□ 0.78
SMC4-204ENST00000462787 IPO8O15397 1037 aaKnown RBP19.95■□□□□ 0.78
SMC4-204ENST00000462787 NFKBIBQ15653 356 aa19.95■□□□□ 0.78
SMC4-204ENST00000462787 MFAP1P55081 439 aaKnown RBP19.95■□□□□ 0.78
SMC4-204ENST00000462787 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
SMC4-204ENST00000462787 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
SMC4-204ENST00000462787 SKOR2Q2VWA4 1001 aaPredicted RBP19.93■□□□□ 0.78
SMC4-204ENST00000462787 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
SMC4-204ENST00000462787 CRBNQ96SW2 442 aa19.91■□□□□ 0.78
SMC4-204ENST00000462787 GOLGA6L4A6NEF3 574 aa19.89■□□□□ 0.78
SMC4-204ENST00000462787 MORC1Q86VD1 984 aa19.89■□□□□ 0.78
SMC4-204ENST00000462787 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
SMC4-204ENST00000462787 ARID3AQ99856 593 aa19.88■□□□□ 0.77
SMC4-204ENST00000462787 IL27Q8NEV9 243 aa19.88■□□□□ 0.77
SMC4-204ENST00000462787 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
SMC4-204ENST00000462787 CNTLNQ9NXG0 1405 aa19.87■□□□□ 0.77
SMC4-204ENST00000462787 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
SMC4-204ENST00000462787 DRC7Q8IY82 874 aa19.86■□□□□ 0.77
SMC4-204ENST00000462787 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
SMC4-204ENST00000462787 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
SMC4-204ENST00000462787 PLIN1O60240 522 aa19.85■□□□□ 0.77
SMC4-204ENST00000462787 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
SMC4-204ENST00000462787 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
SMC4-204ENST00000462787 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
SMC4-204ENST00000462787 CCDC7Q96M83 1385 aa19.83■□□□□ 0.77
SMC4-204ENST00000462787 MSH5O43196 834 aa19.83■□□□□ 0.76
SMC4-204ENST00000462787 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
SMC4-204ENST00000462787 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
SMC4-204ENST00000462787 CHMP5Q9NZZ3 219 aa19.81■□□□□ 0.76
SMC4-204ENST00000462787 NUP155O75694 1391 aa19.79■□□□□ 0.76
SMC4-204ENST00000462787 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
SMC4-204ENST00000462787 PHF14O94880 888 aa19.78■□□□□ 0.76
SMC4-204ENST00000462787 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
SMC4-204ENST00000462787 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
SMC4-204ENST00000462787 PKNOX2Q96KN3 472 aa19.77■□□□□ 0.76
SMC4-204ENST00000462787 USP47Q96K76 1375 aa19.77■□□□□ 0.75
SMC4-204ENST00000462787 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.75
SMC4-204ENST00000462787 KIF21BO75037 1637 aa19.76■□□□□ 0.75
SMC4-204ENST00000462787 MRE11P49959 708 aa19.76■□□□□ 0.75
SMC4-204ENST00000462787 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMC4-204ENST00000462787 E9PSI1 815 aa19.75■□□□□ 0.75
SMC4-204ENST00000462787 KCNJ4P48050 445 aa19.75■□□□□ 0.75
SMC4-204ENST00000462787 CSPP1Q1MSJ5 1256 aa19.75■□□□□ 0.75
SMC4-204ENST00000462787 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
SMC4-204ENST00000462787 SMC4Q9NTJ3 1288 aa19.74■□□□□ 0.75
SMC4-204ENST00000462787 FHOD3Q2V2M9 1422 aa19.74■□□□□ 0.75
SMC4-204ENST00000462787 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
SMC4-204ENST00000462787 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
SMC4-204ENST00000462787 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
SMC4-204ENST00000462787 WASHC2AQ641Q2 1341 aa19.73■□□□□ 0.75
SMC4-204ENST00000462787 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
SMC4-204ENST00000462787 MAP7D2Q96T17 732 aa19.73■□□□□ 0.75
SMC4-204ENST00000462787 KIF7Q2M1P5 1343 aa19.73■□□□□ 0.75
SMC4-204ENST00000462787 CCDC146Q8IYE0 955 aa19.72■□□□□ 0.75
SMC4-204ENST00000462787 CLUAP1Q96AJ1 413 aa19.72■□□□□ 0.75
SMC4-204ENST00000462787 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
SMC4-204ENST00000462787 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.755e-12■■■■■ 47.2
SMC4-204ENST00000462787 BACH2Q9BYV9 841 aa19.72■□□□□ 0.75
SMC4-204ENST00000462787 ST18O60284 1047 aa19.71■□□□□ 0.75
SMC4-204ENST00000462787 TNNT3P45378 269 aaPredicted RBP19.71■□□□□ 0.75
SMC4-204ENST00000462787 NGEFQ8N5V2 710 aa19.71■□□□□ 0.75
SMC4-204ENST00000462787 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
SMC4-204ENST00000462787 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
SMC4-204ENST00000462787 TPM2P07951 284 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms