RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PPP4R3CPQ6ZMV5 832 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 RRP7BPQ9NSQ0 103 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 PPP4R2Q9NY27 417 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 MYT1LQ9UL68 1186 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 NESP48681 1621 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 ABCA5Q8WWZ7 1642 aa4.83□□□□□ -1.64
COL8A1-204ENST00000462604 LAMC3Q9Y6N6 1575 aa4.82□□□□□ -1.64
COL8A1-204ENST00000462604 NCOA1Q15788 1441 aa4.82□□□□□ -1.64
COL8A1-204ENST00000462604 MPHOSPH9Q99550 1183 aa4.82□□□□□ -1.64
COL8A1-204ENST00000462604 CHIC2Q9UKJ5 165 aa4.82□□□□□ -1.64
COL8A1-204ENST00000462604 KIF21AQ7Z4S6 1674 aa4.82□□□□□ -1.64
COL8A1-204ENST00000462604 ZBED9Q6R2W3 1325 aa4.81□□□□□ -1.64
COL8A1-204ENST00000462604 L3MBTL2Q969R5 705 aa4.81□□□□□ -1.64
COL8A1-204ENST00000462604 MRS2Q9HD23 443 aa4.81□□□□□ -1.64
COL8A1-204ENST00000462604 EPRSP07814 1512 aaKnown RBP4.81□□□□□ -1.64
COL8A1-204ENST00000462604 IRX6P78412 446 aaPredicted RBP4.8□□□□□ -1.64
COL8A1-204ENST00000462604 BCL11AQ9H165 835 aa4.8□□□□□ -1.64
COL8A1-204ENST00000462604 PRKRIP1Q9H875 184 aaPredicted RBP4.8□□□□□ -1.64
COL8A1-204ENST00000462604 WDR62O43379 1518 aa4.8□□□□□ -1.64
COL8A1-204ENST00000462604 MAGI3Q5TCQ9 1506 aa4.8□□□□□ -1.64
COL8A1-204ENST00000462604 RPRD2Q5VT52 1461 aaKnown RBP4.8□□□□□ -1.64
COL8A1-204ENST00000462604 DAPK1P53355 1430 aa4.8□□□□□ -1.64
COL8A1-204ENST00000462604 GCC2Q8IWJ2 1684 aa4.8□□□□□ -1.64
COL8A1-204ENST00000462604 ANKRD30BQ9BXX2 1392 aa4.79□□□□□ -1.64
COL8A1-204ENST00000462604 IQGAP2Q13576 1575 aa4.79□□□□□ -1.64
COL8A1-204ENST00000462604 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
COL8A1-204ENST00000462604 VSIG10Q8N0Z9 540 aa4.79□□□□□ -1.64
COL8A1-204ENST00000462604 DENND4BO75064 1496 aaPredicted RBP4.79□□□□□ -1.64
COL8A1-204ENST00000462604 KIF7Q2M1P5 1343 aa4.78□□□□□ -1.64
COL8A1-204ENST00000462604 CDK13Q14004 1512 aaKnown RBP4.78□□□□□ -1.64
COL8A1-204ENST00000462604 TEX14Q8IWB6 1497 aa4.78□□□□□ -1.64
COL8A1-204ENST00000462604 MSH5O43196 834 aa4.78□□□□□ -1.64
COL8A1-204ENST00000462604 ABCC5O15440 1437 aa4.78□□□□□ -1.64
COL8A1-204ENST00000462604 SMG6Q86US8 1419 aaKnown RBP4.78□□□□□ -1.64
COL8A1-204ENST00000462604 ADAMTS12P58397 1594 aa4.78□□□□□ -1.64
COL8A1-204ENST00000462604 ARID4BQ4LE39 1312 aaPredicted RBP4.77□□□□□ -1.65
COL8A1-204ENST00000462604 FOXD1Q16676 465 aa4.77□□□□□ -1.65
COL8A1-204ENST00000462604 ROCK2O75116 1388 aaKnown RBP4.77□□□□□ -1.65
COL8A1-204ENST00000462604 ARID3CA6NKF2 412 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 HAP1P54257 671 aaPredicted RBP4.76□□□□□ -1.65
COL8A1-204ENST00000462604 NBPF8Q3BBV2 869 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 SPATA31E1Q6ZUB1 1445 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 HOMEZQ8IX15 550 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 KIAA1107Q9UPP5 1409 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 KIAA0586Q9BVV6 1533 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 USP47Q96K76 1375 aa4.76□□□□□ -1.65
COL8A1-204ENST00000462604 KDM6BO15054 1643 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 MRC2Q9UBG0 1479 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 TROQ12816 1431 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 C11orf95C9JLR9 678 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 ANP32AP39687 249 aaKnown RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 CCDC184Q52MB2 194 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 B4GALNT3Q6L9W6 998 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 CFDP1Q9UEE9 299 aaPredicted RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 KDM2AQ9Y2K7 1162 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 NOP58Q9Y2X3 529 aaKnown RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 ANKRD30AQ9BXX3 1397 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 DNMT1P26358 1616 aaKnown RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 TARBP1Q13395 1621 aaKnown RBP4.75□□□□□ -1.65
COL8A1-204ENST00000462604 ADGRL2O95490 1459 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 PZPP20742 1482 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 CAMSAP2Q08AD1 1489 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 IFT140Q96RY7 1462 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 MBD5Q9P267 1494 aa4.75□□□□□ -1.65
COL8A1-204ENST00000462604 DHX29Q7Z478 1369 aaKnown RBP4.74□□□□□ -1.65
COL8A1-204ENST00000462604 KTN1Q86UP2 1357 aaKnown RBP4.74□□□□□ -1.65
COL8A1-204ENST00000462604 KIF15Q9NS87 1388 aa4.74□□□□□ -1.65
COL8A1-204ENST00000462604 NUP153P49790 1475 aaKnown RBP4.74□□□□□ -1.65
COL8A1-204ENST00000462604 RALGAPBQ86X10 1494 aa4.74□□□□□ -1.65
COL8A1-204ENST00000462604 RNF123Q5XPI4 1314 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 ZNF644Q9H582 1327 aaPredicted RBP4.73□□□□□ -1.65
COL8A1-204ENST00000462604 UHRF1BP1Q6BDS2 1440 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 DISP1Q96F81 1524 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 KIAA0556O60303 1618 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 LRRIQ1Q96JM4 1722 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 ZNF326Q5BKZ1 582 aaKnown RBP4.73□□□□□ -1.65
COL8A1-204ENST00000462604 TMC1Q8TDI8 760 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 CCDC136Q96JN2 1154 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 POLR3GLQ9BT43 218 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 FOXD4L1Q9NU39 408 aa4.73□□□□□ -1.65
COL8A1-204ENST00000462604 ARHGEF12Q9NZN5 1544 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 PKD2Q13563 968 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 RALBP1Q15311 655 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 CARD11Q9BXL7 1154 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 BRD4O60885 1362 aaPredicted RBP4.72□□□□□ -1.65
COL8A1-204ENST00000462604 SHANK2Q9UPX8 1470 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 KIF14Q15058 1648 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 CARMIL2Q6F5E8 1435 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 PRG4Q92954 1404 aaPredicted RBP4.72□□□□□ -1.65
COL8A1-204ENST00000462604 ANKRD50Q9ULJ7 1429 aa4.72□□□□□ -1.65
COL8A1-204ENST00000462604 MYBBP1AQ9BQG0 1328 aaKnown RBP4.72□□□□□ -1.65
COL8A1-204ENST00000462604 GRIN2AQ12879 1464 aa4.71□□□□□ -1.66
COL8A1-204ENST00000462604 RTL5Q5HYW3 569 aaPredicted RBP4.71□□□□□ -1.66
COL8A1-204ENST00000462604 ZNF777Q9ULD5 760 aaPredicted RBP4.71□□□□□ -1.66
COL8A1-204ENST00000462604 RAPGEF6Q8TEU7 1601 aa4.71□□□□□ -1.66
COL8A1-204ENST00000462604 GPATCH8Q9UKJ3 1502 aaKnown RBP4.71□□□□□ -1.66
COL8A1-204ENST00000462604 C9orf84Q5VXU9 1444 aa4.71□□□□□ -1.66
COL8A1-204ENST00000462604 PBRM1Q86U86 1689 aa4.7□□□□□ -1.66
COL8A1-204ENST00000462604 NUP155O75694 1391 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms