RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
C9orf78-203ENST00000461539 FANCAO15360 1455 aa14.86□□□□□ -0.03
C9orf78-203ENST00000461539 HNRNPMP52272 730 aaKnown RBP eCLIP14.85□□□□□ -0.03
C9orf78-203ENST00000461539 ITGAEP38570 1179 aa14.84□□□□□ -0.03
C9orf78-203ENST00000461539 ARAP3Q8WWN8 1544 aa14.83□□□□□ -0.04
C9orf78-203ENST00000461539 AKNAQ7Z591 1439 aa14.83□□□□□ -0.04
C9orf78-203ENST00000461539 TEX14Q8IWB6 1497 aa14.82□□□□□ -0.04
C9orf78-203ENST00000461539 CAMSAP2Q08AD1 1489 aa14.82□□□□□ -0.04
C9orf78-203ENST00000461539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
C9orf78-203ENST00000461539 SCAPERQ9BY12 1400 aa14.81□□□□□ -0.04
C9orf78-203ENST00000461539 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
C9orf78-203ENST00000461539 PLEKHH2Q8IVE3 1493 aa14.81□□□□□ -0.04
C9orf78-203ENST00000461539 NEO1Q92859 1461 aa14.81□□□□□ -0.04
C9orf78-203ENST00000461539 KIAA1107Q9UPP5 1409 aa14.8□□□□□ -0.04
C9orf78-203ENST00000461539 ADGRL1O94910 1474 aa14.79□□□□□ -0.04
C9orf78-203ENST00000461539 RSPH4AQ5TD94 716 aa14.79□□□□□ -0.04
C9orf78-203ENST00000461539 PREX2Q70Z35 1606 aa14.79□□□□□ -0.04
C9orf78-203ENST00000461539 MAP3K4Q9Y6R4 1608 aa14.79□□□□□ -0.04
C9orf78-203ENST00000461539 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
C9orf78-203ENST00000461539 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
C9orf78-203ENST00000461539 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
C9orf78-203ENST00000461539 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.04
C9orf78-203ENST00000461539 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.04
C9orf78-203ENST00000461539 RAPGEF3O95398 923 aa14.77□□□□□ -0.05
C9orf78-203ENST00000461539 MYO5CQ9NQX4 1742 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 SAMD9LQ8IVG5 1584 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 ARHGEF12Q9NZN5 1544 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
C9orf78-203ENST00000461539 ABCC5O15440 1437 aa14.75□□□□□ -0.05
C9orf78-203ENST00000461539 TRAPPC8Q9Y2L5 1435 aa14.75□□□□□ -0.05
C9orf78-203ENST00000461539 SYCP2Q9BX26 1530 aa14.75□□□□□ -0.05
C9orf78-203ENST00000461539 DENND4BO75064 1496 aaPredicted RBP14.75□□□□□ -0.05
C9orf78-203ENST00000461539 CDC42BPAQ5VT25 1732 aa14.75□□□□□ -0.05
C9orf78-203ENST00000461539 DAPK1P53355 1430 aa14.74□□□□□ -0.05
C9orf78-203ENST00000461539 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
C9orf78-203ENST00000461539 ABCC1P33527 1531 aa14.73□□□□□ -0.05
C9orf78-203ENST00000461539 CCDC141Q6ZP82 1450 aa14.73□□□□□ -0.05
C9orf78-203ENST00000461539 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
C9orf78-203ENST00000461539 POGZQ7Z3K3 1410 aa14.72□□□□□ -0.05
C9orf78-203ENST00000461539 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.05
C9orf78-203ENST00000461539 PTPRKQ15262 1439 aa14.71□□□□□ -0.05
C9orf78-203ENST00000461539 CFAP74Q9C0B2 1584 aa14.71□□□□□ -0.05
C9orf78-203ENST00000461539 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
C9orf78-203ENST00000461539 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
C9orf78-203ENST00000461539 C9orf84Q5VXU9 1444 aa14.69□□□□□ -0.06
C9orf78-203ENST00000461539 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
C9orf78-203ENST00000461539 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
C9orf78-203ENST00000461539 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
C9orf78-203ENST00000461539 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
C9orf78-203ENST00000461539 TSPOAP1O95153 1857 aa14.66□□□□□ -0.06
C9orf78-203ENST00000461539 SHANK2Q9UPX8 1470 aa14.65□□□□□ -0.06
C9orf78-203ENST00000461539 ROCK1Q13464 1354 aa14.64□□□□□ -0.07
C9orf78-203ENST00000461539 DNMT1P26358 1616 aaKnown RBP14.64□□□□□ -0.07
C9orf78-203ENST00000461539 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
C9orf78-203ENST00000461539 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
C9orf78-203ENST00000461539 KIF15Q9NS87 1388 aa14.62□□□□□ -0.07
C9orf78-203ENST00000461539 MLH3Q9UHC1 1453 aa14.62□□□□□ -0.07
C9orf78-203ENST00000461539 ADGRL2O95490 1459 aa14.6□□□□□ -0.07
C9orf78-203ENST00000461539 KDM5CP41229 1560 aa14.6□□□□□ -0.07
C9orf78-203ENST00000461539 YEATS2Q9ULM3 1422 aa14.59□□□□□ -0.07
C9orf78-203ENST00000461539 MAGI2Q86UL8 1455 aa14.59□□□□□ -0.07
C9orf78-203ENST00000461539 HFM1A2PYH4 1435 aa14.58□□□□□ -0.07
C9orf78-203ENST00000461539 ATP7AQ04656 1500 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 ZFYVE16Q7Z3T8 1539 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 FRMPD1Q5SYB0 1578 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 KDM6BO15054 1643 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 NAIPQ13075 1403 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
C9orf78-203ENST00000461539 MAST1Q9Y2H9 1570 aa14.57□□□□□ -0.08
C9orf78-203ENST00000461539 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
C9orf78-203ENST00000461539 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
C9orf78-203ENST00000461539 ANKRD50Q9ULJ7 1429 aa14.56□□□□□ -0.08
C9orf78-203ENST00000461539 HECW2Q9P2P5 1572 aa14.55□□□□□ -0.08
C9orf78-203ENST00000461539 KIF3BO15066 747 aa14.54□□□□□ -0.08
C9orf78-203ENST00000461539 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
C9orf78-203ENST00000461539 A2MP01023 1474 aa14.54□□□□□ -0.08
C9orf78-203ENST00000461539 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
C9orf78-203ENST00000461539 ATP10AO60312 1499 aa14.53□□□□□ -0.08
C9orf78-203ENST00000461539 RICTORQ6R327 1708 aa14.52□□□□□ -0.08
C9orf78-203ENST00000461539 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.08
C9orf78-203ENST00000461539 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
C9orf78-203ENST00000461539 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
C9orf78-203ENST00000461539 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
C9orf78-203ENST00000461539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.092e-7■■■□□ 14.9
C9orf78-203ENST00000461539 CROCC2H7BZ55 1655 aa14.51□□□□□ -0.09
C9orf78-203ENST00000461539 HRCP23327 699 aa14.5□□□□□ -0.09
C9orf78-203ENST00000461539 PLXNC1O60486 1568 aa14.5□□□□□ -0.09
C9orf78-203ENST00000461539 DIP2CQ9Y2E4 1556 aa14.49□□□□□ -0.09
C9orf78-203ENST00000461539 GGT6Q6P531 493 aa14.49□□□□□ -0.09
C9orf78-203ENST00000461539 KIDINS220Q9ULH0 1771 aa14.48□□□□□ -0.09
C9orf78-203ENST00000461539 MLECQ14165 292 aa14.48□□□□□ -0.09
C9orf78-203ENST00000461539 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
C9orf78-203ENST00000461539 ARHGEF40Q8TER5 1519 aa14.47□□□□□ -0.09
C9orf78-203ENST00000461539 ABCA6Q8N139 1617 aa14.47□□□□□ -0.09
C9orf78-203ENST00000461539 NUP155O75694 1391 aa14.46□□□□□ -0.1
C9orf78-203ENST00000461539 ADGBQ8N7X0 1667 aa14.45□□□□□ -0.1
C9orf78-203ENST00000461539 KANK1Q14678 1352 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms