RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 PTPRGP23470 1445 aa11.57□□□□□ -0.56
PDE6B-204ENST00000461490 CARMIL2Q6F5E8 1435 aa11.55□□□□□ -0.56
PDE6B-204ENST00000461490 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
PDE6B-204ENST00000461490 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
PDE6B-204ENST00000461490 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
PDE6B-204ENST00000461490 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
PDE6B-204ENST00000461490 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
PDE6B-204ENST00000461490 ABCC10Q5T3U5 1492 aa11.53□□□□□ -0.56
PDE6B-204ENST00000461490 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
PDE6B-204ENST00000461490 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
PDE6B-204ENST00000461490 DIP2BQ9P265 1576 aa11.52□□□□□ -0.57
PDE6B-204ENST00000461490 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.57
PDE6B-204ENST00000461490 C7P10643 843 aa11.51□□□□□ -0.57
PDE6B-204ENST00000461490 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
PDE6B-204ENST00000461490 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
PDE6B-204ENST00000461490 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
PDE6B-204ENST00000461490 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
PDE6B-204ENST00000461490 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
PDE6B-204ENST00000461490 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
PDE6B-204ENST00000461490 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
PDE6B-204ENST00000461490 KIAA0556O60303 1618 aa11.46□□□□□ -0.57
PDE6B-204ENST00000461490 UACAQ9BZF9 1416 aa11.46□□□□□ -0.57
PDE6B-204ENST00000461490 ASXL2Q76L83 1435 aa11.45□□□□□ -0.58
PDE6B-204ENST00000461490 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
PDE6B-204ENST00000461490 KDM6BO15054 1643 aa11.44□□□□□ -0.58
PDE6B-204ENST00000461490 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
PDE6B-204ENST00000461490 UHRF1BP1LA0JNW5 1464 aa11.43□□□□□ -0.58
PDE6B-204ENST00000461490 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
PDE6B-204ENST00000461490 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
PDE6B-204ENST00000461490 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
PDE6B-204ENST00000461490 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
PDE6B-204ENST00000461490 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
PDE6B-204ENST00000461490 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.58
PDE6B-204ENST00000461490 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
PDE6B-204ENST00000461490 KDM5BQ9UGL1 1544 aa11.4□□□□□ -0.59
PDE6B-204ENST00000461490 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
PDE6B-204ENST00000461490 ARID3CA6NKF2 412 aa11.39□□□□□ -0.59
PDE6B-204ENST00000461490 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
PDE6B-204ENST00000461490 GLI2P10070 1586 aa11.38□□□□□ -0.59
PDE6B-204ENST00000461490 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
PDE6B-204ENST00000461490 EPRSP07814 1512 aaKnown RBP11.37□□□□□ -0.59
PDE6B-204ENST00000461490 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
PDE6B-204ENST00000461490 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
PDE6B-204ENST00000461490 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
PDE6B-204ENST00000461490 ABCA8O94911 1581 aa11.35□□□□□ -0.59
PDE6B-204ENST00000461490 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
PDE6B-204ENST00000461490 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
PDE6B-204ENST00000461490 EEA1Q15075 1411 aa11.32□□□□□ -0.6
PDE6B-204ENST00000461490 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
PDE6B-204ENST00000461490 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
PDE6B-204ENST00000461490 TEX14Q8IWB6 1497 aa11.3□□□□□ -0.6
PDE6B-204ENST00000461490 COL17A1Q9UMD9 1497 aaPredicted RBP11.3□□□□□ -0.6
PDE6B-204ENST00000461490 CFAP43Q8NDM7 1665 aa11.29□□□□□ -0.6
PDE6B-204ENST00000461490 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
PDE6B-204ENST00000461490 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
PDE6B-204ENST00000461490 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
PDE6B-204ENST00000461490 RAPGEF6Q8TEU7 1601 aa11.27□□□□□ -0.6
PDE6B-204ENST00000461490 ATP10BO94823 1461 aa11.27□□□□□ -0.6
PDE6B-204ENST00000461490 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
PDE6B-204ENST00000461490 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
PDE6B-204ENST00000461490 KIF21BO75037 1637 aa11.23□□□□□ -0.61
PDE6B-204ENST00000461490 MAGI3Q5TCQ9 1506 aa11.22□□□□□ -0.61
PDE6B-204ENST00000461490 ADGRL1O94910 1474 aa11.21□□□□□ -0.61
PDE6B-204ENST00000461490 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
PDE6B-204ENST00000461490 ABCA9Q8IUA7 1624 aa11.19□□□□□ -0.62
PDE6B-204ENST00000461490 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
PDE6B-204ENST00000461490 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
PDE6B-204ENST00000461490 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
PDE6B-204ENST00000461490 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
PDE6B-204ENST00000461490 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
PDE6B-204ENST00000461490 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
PDE6B-204ENST00000461490 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
PDE6B-204ENST00000461490 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
PDE6B-204ENST00000461490 CDK13Q14004 1512 aaKnown RBP11.14□□□□□ -0.63
PDE6B-204ENST00000461490 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
PDE6B-204ENST00000461490 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
PDE6B-204ENST00000461490 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
PDE6B-204ENST00000461490 TIE1P35590 1138 aa11.12□□□□□ -0.63
PDE6B-204ENST00000461490 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
PDE6B-204ENST00000461490 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
PDE6B-204ENST00000461490 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
PDE6B-204ENST00000461490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDE6B-204ENST00000461490 ST18O60284 1047 aa11.1□□□□□ -0.63
PDE6B-204ENST00000461490 NEO1Q92859 1461 aa11.1□□□□□ -0.63
PDE6B-204ENST00000461490 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
PDE6B-204ENST00000461490 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
PDE6B-204ENST00000461490 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
PDE6B-204ENST00000461490 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
PDE6B-204ENST00000461490 HECW1Q76N89 1606 aa11.08□□□□□ -0.64
PDE6B-204ENST00000461490 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
PDE6B-204ENST00000461490 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
PDE6B-204ENST00000461490 FRMPD1Q5SYB0 1578 aa11.07□□□□□ -0.64
PDE6B-204ENST00000461490 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
PDE6B-204ENST00000461490 SEC24BO95487 1268 aa11.07□□□□□ -0.64
PDE6B-204ENST00000461490 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
PDE6B-204ENST00000461490 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
PDE6B-204ENST00000461490 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
PDE6B-204ENST00000461490 FANCAO15360 1455 aa11.06□□□□□ -0.64
PDE6B-204ENST00000461490 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
PDE6B-204ENST00000461490 MYO5CQ9NQX4 1742 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms