RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CASKIN1Q8WXD9 1431 aa8.44□□□□□ -1.06
HLA-DQA1-205ENST00000460633 DNAJC5Q9H3Z4 198 aa8.43□□□□□ -1.06
HLA-DQA1-205ENST00000460633 UHRF1BP1LA0JNW5 1464 aa8.43□□□□□ -1.06
HLA-DQA1-205ENST00000460633 NCBP3Q53F19 620 aaKnown RBP8.42□□□□□ -1.06
HLA-DQA1-205ENST00000460633 MEX3CQ5U5Q3 659 aaKnown RBP8.42□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CDK11BP21127 795 aaKnown RBP8.42□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CYB5RLQ6IPT4 315 aa8.42□□□□□ -1.06
HLA-DQA1-205ENST00000460633 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
HLA-DQA1-205ENST00000460633 KIAA0556O60303 1618 aa8.41□□□□□ -1.06
HLA-DQA1-205ENST00000460633 KANK1Q14678 1352 aa8.41□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CFAP74Q9C0B2 1584 aa8.41□□□□□ -1.06
HLA-DQA1-205ENST00000460633 RUSC2Q8N2Y8 1516 aa8.41□□□□□ -1.06
HLA-DQA1-205ENST00000460633 EHBP1L1Q8N3D4 1523 aa8.4□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
HLA-DQA1-205ENST00000460633 ANP32AP39687 249 aaKnown RBP8.4□□□□□ -1.06
HLA-DQA1-205ENST00000460633 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
HLA-DQA1-205ENST00000460633 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
HLA-DQA1-205ENST00000460633 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
HLA-DQA1-205ENST00000460633 SF3B2Q13435 895 aaKnown RBP8.39□□□□□ -1.07
HLA-DQA1-205ENST00000460633 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
HLA-DQA1-205ENST00000460633 NBR1Q14596 966 aa8.39□□□□□ -1.07
HLA-DQA1-205ENST00000460633 CLASP1Q7Z460 1538 aa8.39□□□□□ -1.07
HLA-DQA1-205ENST00000460633 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
HLA-DQA1-205ENST00000460633 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
HLA-DQA1-205ENST00000460633 CANXP27824 592 aaKnown RBP8.38□□□□□ -1.07
HLA-DQA1-205ENST00000460633 ABCC2Q92887 1545 aa8.38□□□□□ -1.07
HLA-DQA1-205ENST00000460633 KCNH8Q96L42 1107 aa8.38□□□□□ -1.07
HLA-DQA1-205ENST00000460633 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
HLA-DQA1-205ENST00000460633 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
HLA-DQA1-205ENST00000460633 RAPGEF6Q8TEU7 1601 aa8.37□□□□□ -1.07
HLA-DQA1-205ENST00000460633 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
HLA-DQA1-205ENST00000460633 KIF14Q15058 1648 aa8.36□□□□□ -1.07
HLA-DQA1-205ENST00000460633 TULP1O00294 542 aaPredicted RBP8.35□□□□□ -1.07
HLA-DQA1-205ENST00000460633 EID1Q9Y6B2 187 aa8.35□□□□□ -1.07
HLA-DQA1-205ENST00000460633 TROQ12816 1431 aaPredicted RBP8.34□□□□□ -1.07
HLA-DQA1-205ENST00000460633 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
HLA-DQA1-205ENST00000460633 FAM69CQ0P6D2 419 aa8.34□□□□□ -1.07
HLA-DQA1-205ENST00000460633 DDX10Q13206 875 aaKnown RBP8.34□□□□□ -1.07
HLA-DQA1-205ENST00000460633 ARHGEF11O15085 1522 aa8.33□□□□□ -1.08
HLA-DQA1-205ENST00000460633 SHROOM2Q13796 1616 aa8.32□□□□□ -1.08
HLA-DQA1-205ENST00000460633 WDR7Q9Y4E6 1490 aa8.32□□□□□ -1.08
HLA-DQA1-205ENST00000460633 CHMP4AQ9BY43 222 aa8.32□□□□□ -1.08
HLA-DQA1-205ENST00000460633 SAMD9Q5K651 1589 aa8.32□□□□□ -1.08
HLA-DQA1-205ENST00000460633 HNRNPUQ00839 825 aaKnown RBP eCLIP8.31□□□□□ -1.08
HLA-DQA1-205ENST00000460633 KRI1Q8N9T8 703 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-205ENST00000460633 SUPT16HQ9Y5B9 1047 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-205ENST00000460633 SUPT6HQ7KZ85 1726 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-205ENST00000460633 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-205ENST00000460633 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
HLA-DQA1-205ENST00000460633 MIA2Q96PC5 1412 aa8.3□□□□□ -1.08
HLA-DQA1-205ENST00000460633 IRX6P78412 446 aaPredicted RBP8.3□□□□□ -1.08
HLA-DQA1-205ENST00000460633 ITSN2Q9NZM3 1697 aa8.3□□□□□ -1.08
HLA-DQA1-205ENST00000460633 ANKRD30AQ9BXX3 1397 aa8.3□□□□□ -1.08
HLA-DQA1-205ENST00000460633 PPP6R1Q9UPN7 881 aa8.29□□□□□ -1.08
HLA-DQA1-205ENST00000460633 ARHGAP5Q13017 1502 aa8.29□□□□□ -1.08
HLA-DQA1-205ENST00000460633 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
HLA-DQA1-205ENST00000460633 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
HLA-DQA1-205ENST00000460633 GLIPR1L2Q4G1C9 344 aa8.28□□□□□ -1.08
HLA-DQA1-205ENST00000460633 MYOM3Q5VTT5 1437 aa8.28□□□□□ -1.08
HLA-DQA1-205ENST00000460633 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
HLA-DQA1-205ENST00000460633 CD109Q6YHK3 1445 aa8.27□□□□□ -1.08
HLA-DQA1-205ENST00000460633 HOMEZQ8IX15 550 aa8.27□□□□□ -1.09
HLA-DQA1-205ENST00000460633 RIMBP3CA6NJZ7 1639 aa8.27□□□□□ -1.09
HLA-DQA1-205ENST00000460633 RIMBP3BA6NNM3 1639 aa8.27□□□□□ -1.09
HLA-DQA1-205ENST00000460633 RIMBP3Q9UFD9 1639 aa8.27□□□□□ -1.09
HLA-DQA1-205ENST00000460633 NEO1Q92859 1461 aa8.27□□□□□ -1.09
HLA-DQA1-205ENST00000460633 SPAG9O60271 1321 aaKnown RBP8.26□□□□□ -1.09
HLA-DQA1-205ENST00000460633 PLEKHG5O94827 1062 aa8.26□□□□□ -1.09
HLA-DQA1-205ENST00000460633 ASXL2Q76L83 1435 aa8.26□□□□□ -1.09
HLA-DQA1-205ENST00000460633 AKNAQ7Z591 1439 aa8.26□□□□□ -1.09
HLA-DQA1-205ENST00000460633 DISP1Q96F81 1524 aa8.25□□□□□ -1.09
HLA-DQA1-205ENST00000460633 ABCA8O94911 1581 aa8.25□□□□□ -1.09
HLA-DQA1-205ENST00000460633 MAPKBP1O60336 1514 aa8.25□□□□□ -1.09
HLA-DQA1-205ENST00000460633 KDM5BQ9UGL1 1544 aa8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 FAM9BQ8IZU0 186 aa8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 PNNQ9H307 717 aaKnown RBP8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 DENND4BO75064 1496 aaPredicted RBP8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 ARAP1Q96P48 1450 aa8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 TIAM1Q13009 1591 aa8.24□□□□□ -1.09
HLA-DQA1-205ENST00000460633 DMRT2Q9Y5R5 561 aa8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 POGKQ9P215 609 aa8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 ARAP3Q8WWN8 1544 aa8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 ARXQ96QS3 562 aa8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 LRRC9Q6ZRR7 1453 aa8.23□□□□□ -1.09
HLA-DQA1-205ENST00000460633 PKNOX2Q96KN3 472 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 G3V3G9 751 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 DCAF8Q5TAQ9 597 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 CCDC136Q96JN2 1154 aa8.22□□□□□ -1.09
HLA-DQA1-205ENST00000460633 GLI2P10070 1586 aa8.21□□□□□ -1.09
HLA-DQA1-205ENST00000460633 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQA1-205ENST00000460633 CFAP43Q8NDM7 1665 aa8.2□□□□□ -1.1
HLA-DQA1-205ENST00000460633 PLCH2O75038 1416 aa8.2□□□□□ -1.1
HLA-DQA1-205ENST00000460633 KIAA1107Q9UPP5 1409 aa8.2□□□□□ -1.1
HLA-DQA1-205ENST00000460633 FANCAO15360 1455 aa8.2□□□□□ -1.1
HLA-DQA1-205ENST00000460633 NCOA2Q15596 1464 aa8.2□□□□□ -1.1
HLA-DQA1-205ENST00000460633 ATP10BO94823 1461 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms