RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 ITSN2Q9NZM3 1697 aa21.61■■□□□ 1.05
PCNP-202ENST00000460231 PREX2Q70Z35 1606 aa21.59■■□□□ 1.05
PCNP-202ENST00000460231 ABCC5O15440 1437 aa21.58■■□□□ 1.04
PCNP-202ENST00000460231 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
PCNP-202ENST00000460231 NPM1P06748 294 aaKnown RBP eCLIP21.56■■□□□ 1.04
PCNP-202ENST00000460231 HNRNPMP52272 730 aaKnown RBP eCLIP21.55■■□□□ 1.04
PCNP-202ENST00000460231 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
PCNP-202ENST00000460231 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
PCNP-202ENST00000460231 DAPK1P53355 1430 aa21.55■■□□□ 1.04
PCNP-202ENST00000460231 HRCP23327 699 aa21.54■■□□□ 1.04
PCNP-202ENST00000460231 ARHGAP5Q13017 1502 aa21.54■■□□□ 1.04
PCNP-202ENST00000460231 MYO5CQ9NQX4 1742 aa21.53■■□□□ 1.04
PCNP-202ENST00000460231 DNMT1P26358 1616 aaKnown RBP21.52■■□□□ 1.04
PCNP-202ENST00000460231 ARHGEF12Q9NZN5 1544 aa21.51■■□□□ 1.03
PCNP-202ENST00000460231 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
PCNP-202ENST00000460231 PLCH2O75038 1416 aa21.5■■□□□ 1.03
PCNP-202ENST00000460231 KDM6BO15054 1643 aa21.5■■□□□ 1.03
PCNP-202ENST00000460231 MBD5Q9P267 1494 aa21.5■■□□□ 1.03
PCNP-202ENST00000460231 ABCA9Q8IUA7 1624 aa21.49■■□□□ 1.03
PCNP-202ENST00000460231 NAIPQ13075 1403 aa21.48■■□□□ 1.03
PCNP-202ENST00000460231 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
PCNP-202ENST00000460231 SYCP2Q9BX26 1530 aa21.48■■□□□ 1.03
PCNP-202ENST00000460231 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
PCNP-202ENST00000460231 HFM1A2PYH4 1435 aa21.45■■□□□ 1.02
PCNP-202ENST00000460231 DHX57Q6P158 1386 aaKnown RBP21.43■■□□□ 1.02
PCNP-202ENST00000460231 CROCC2H7BZ55 1655 aa21.43■■□□□ 1.02
PCNP-202ENST00000460231 AKNAQ7Z591 1439 aa21.42■■□□□ 1.02
PCNP-202ENST00000460231 TRAPPC8Q9Y2L5 1435 aa21.4■■□□□ 1.02
PCNP-202ENST00000460231 FANCAO15360 1455 aa21.39■■□□□ 1.02
PCNP-202ENST00000460231 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
PCNP-202ENST00000460231 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
PCNP-202ENST00000460231 ABCC1P33527 1531 aa21.38■■□□□ 1.01
PCNP-202ENST00000460231 NCOA1Q15788 1441 aa21.37■■□□□ 1.01
PCNP-202ENST00000460231 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
PCNP-202ENST00000460231 C9orf84Q5VXU9 1444 aa21.36■■□□□ 1.01
PCNP-202ENST00000460231 ARHGEF5Q12774 1597 aa21.35■■□□□ 1.01
PCNP-202ENST00000460231 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
PCNP-202ENST00000460231 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
PCNP-202ENST00000460231 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
PCNP-202ENST00000460231 DIP2BQ9P265 1576 aa21.34■■□□□ 1.01
PCNP-202ENST00000460231 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
PCNP-202ENST00000460231 ROCK1Q13464 1354 aa21.32■■□□□ 1
PCNP-202ENST00000460231 KIAA1107Q9UPP5 1409 aa21.32■■□□□ 1
PCNP-202ENST00000460231 ADGRL2O95490 1459 aa21.31■■□□□ 1
PCNP-202ENST00000460231 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
PCNP-202ENST00000460231 MAP3K4Q9Y6R4 1608 aa21.3■■□□□ 1
PCNP-202ENST00000460231 ADGRL1O94910 1474 aa21.29■■□□□ 1
PCNP-202ENST00000460231 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
PCNP-202ENST00000460231 SHANK2Q9UPX8 1470 aa21.29■■□□□ 1
PCNP-202ENST00000460231 TSPOAP1O95153 1857 aa21.29■■□□□ 1
PCNP-202ENST00000460231 TSPY4P0CV99 314 aa21.29■■□□□ 1
PCNP-202ENST00000460231 TSPY10P0CW01 314 aa21.29■■□□□ 1
PCNP-202ENST00000460231 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
PCNP-202ENST00000460231 DENND4BO75064 1496 aaPredicted RBP21.28■■□□□ 1
PCNP-202ENST00000460231 KIF13AQ9H1H9 1805 aa21.26■□□□□ 0.99
PCNP-202ENST00000460231 ANKRD30AQ9BXX3 1397 aa21.25■□□□□ 0.99
PCNP-202ENST00000460231 PLEKHH2Q8IVE3 1493 aa21.25■□□□□ 0.99
PCNP-202ENST00000460231 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
PCNP-202ENST00000460231 PPRC1Q5VV67 1664 aaKnown RBP21.24■□□□□ 0.99
PCNP-202ENST00000460231 GLI2P10070 1586 aa21.24■□□□□ 0.99
PCNP-202ENST00000460231 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
PCNP-202ENST00000460231 FOXD1Q16676 465 aa21.22■□□□□ 0.99
PCNP-202ENST00000460231 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
PCNP-202ENST00000460231 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
PCNP-202ENST00000460231 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.98
PCNP-202ENST00000460231 ZFYVE16Q7Z3T8 1539 aa21.2■□□□□ 0.98
PCNP-202ENST00000460231 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
PCNP-202ENST00000460231 SIN3AQ96ST3 1273 aa21.19■□□□□ 0.98
PCNP-202ENST00000460231 SPAG9O60271 1321 aaKnown RBP21.18■□□□□ 0.98
PCNP-202ENST00000460231 POGZQ7Z3K3 1410 aa21.15■□□□□ 0.98
PCNP-202ENST00000460231 INO80Q9ULG1 1556 aaPredicted RBP21.15■□□□□ 0.98
PCNP-202ENST00000460231 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
PCNP-202ENST00000460231 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
PCNP-202ENST00000460231 PZPP20742 1482 aa21.13■□□□□ 0.97
PCNP-202ENST00000460231 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
PCNP-202ENST00000460231 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
PCNP-202ENST00000460231 NEO1Q92859 1461 aa21.13■□□□□ 0.97
PCNP-202ENST00000460231 COL17A1Q9UMD9 1497 aaPredicted RBP21.12■□□□□ 0.97
PCNP-202ENST00000460231 CFAP74Q9C0B2 1584 aa21.11■□□□□ 0.97
PCNP-202ENST00000460231 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
PCNP-202ENST00000460231 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
PCNP-202ENST00000460231 ZNF518AQ6AHZ1 1483 aa21.1■□□□□ 0.97
PCNP-202ENST00000460231 KDM5CP41229 1560 aa21.1■□□□□ 0.97
PCNP-202ENST00000460231 RICTORQ6R327 1708 aa21.09■□□□□ 0.97
PCNP-202ENST00000460231 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
PCNP-202ENST00000460231 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
PCNP-202ENST00000460231 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
PCNP-202ENST00000460231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.963e-8■■■■□ 19.7
PCNP-202ENST00000460231 NUP155O75694 1391 aa21.06■□□□□ 0.96
PCNP-202ENST00000460231 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
PCNP-202ENST00000460231 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
PCNP-202ENST00000460231 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
PCNP-202ENST00000460231 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
PCNP-202ENST00000460231 CLSPNQ9HAW4 1339 aa21.02■□□□□ 0.96
PCNP-202ENST00000460231 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.96
PCNP-202ENST00000460231 TRHP20396 242 aaPredicted RBP21.01■□□□□ 0.95
PCNP-202ENST00000460231 MLH3Q9UHC1 1453 aa21■□□□□ 0.95
PCNP-202ENST00000460231 PKD2Q13563 968 aa21■□□□□ 0.95
PCNP-202ENST00000460231 ERBINQ96RT1 1412 aa21■□□□□ 0.95
PCNP-202ENST00000460231 UNC13BO14795 1591 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms