RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 ZFYVE16Q7Z3T8 1539 aa20.12■□□□□ 0.81
C4A-244ENST00000460060 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
C4A-244ENST00000460060 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
C4A-244ENST00000460060 PLCH2O75038 1416 aa20.11■□□□□ 0.81
C4A-244ENST00000460060 CDK13Q14004 1512 aaKnown RBP20.11■□□□□ 0.81
C4A-244ENST00000460060 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
C4A-244ENST00000460060 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
C4A-244ENST00000460060 MLECQ14165 292 aa20.09■□□□□ 0.81
C4A-244ENST00000460060 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
C4A-244ENST00000460060 EFCAB2Q5VUJ9 269 aa20.05■□□□□ 0.8
C4A-244ENST00000460060 ATP10AO60312 1499 aa20.04■□□□□ 0.8
C4A-244ENST00000460060 FER1L4A9Z1Z3 1794 aa20.03■□□□□ 0.8
C4A-244ENST00000460060 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
C4A-244ENST00000460060 FMN1Q68DA7 1419 aa20.02■□□□□ 0.79
C4A-244ENST00000460060 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
C4A-244ENST00000460060 CERKQ8TCT0 537 aa20■□□□□ 0.79
C4A-244ENST00000460060 C9orf84Q5VXU9 1444 aa20■□□□□ 0.79
C4A-244ENST00000460060 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
C4A-244ENST00000460060 ARHGEF12Q9NZN5 1544 aa19.99■□□□□ 0.79
C4A-244ENST00000460060 CEBPAP49715 358 aaPredicted RBP19.96■□□□□ 0.79
C4A-244ENST00000460060 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
C4A-244ENST00000460060 SETD1BQ9UPS6 1966 aaKnown RBP19.95■□□□□ 0.78
C4A-244ENST00000460060 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
C4A-244ENST00000460060 KIF14Q15058 1648 aa19.94■□□□□ 0.78
C4A-244ENST00000460060 ZNF518AQ6AHZ1 1483 aa19.93■□□□□ 0.78
C4A-244ENST00000460060 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
C4A-244ENST00000460060 PREX1Q8TCU6 1659 aa19.92■□□□□ 0.78
C4A-244ENST00000460060 KDM5CP41229 1560 aa19.91■□□□□ 0.78
C4A-244ENST00000460060 ARHGAP5Q13017 1502 aa19.9■□□□□ 0.78
C4A-244ENST00000460060 APLP2Q06481 763 aa19.89■□□□□ 0.77
C4A-244ENST00000460060 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.77
C4A-244ENST00000460060 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
C4A-244ENST00000460060 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
C4A-244ENST00000460060 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
C4A-244ENST00000460060 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
C4A-244ENST00000460060 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
C4A-244ENST00000460060 DIP2CQ9Y2E4 1556 aa19.86■□□□□ 0.77
C4A-244ENST00000460060 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
C4A-244ENST00000460060 UHRF1BP1Q6BDS2 1440 aa19.85■□□□□ 0.77
C4A-244ENST00000460060 REREQ9P2R6 1566 aa19.84■□□□□ 0.77
C4A-244ENST00000460060 TRAPPC8Q9Y2L5 1435 aa19.81■□□□□ 0.76
C4A-244ENST00000460060 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
C4A-244ENST00000460060 AGLP35573 1532 aa19.8■□□□□ 0.76
C4A-244ENST00000460060 C3P01024 1663 aa19.78■□□□□ 0.76
C4A-244ENST00000460060 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
C4A-244ENST00000460060 ESF1Q9H501 851 aaKnown RBP19.78■□□□□ 0.76
C4A-244ENST00000460060 ABCC1P33527 1531 aa19.77■□□□□ 0.76
C4A-244ENST00000460060 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
C4A-244ENST00000460060 PTPRTO14522 1441 aa19.76■□□□□ 0.75
C4A-244ENST00000460060 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
C4A-244ENST00000460060 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
C4A-244ENST00000460060 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
C4A-244ENST00000460060 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
C4A-244ENST00000460060 TIAM1Q13009 1591 aa19.73■□□□□ 0.75
C4A-244ENST00000460060 CDC42BPAQ5VT25 1732 aa19.72■□□□□ 0.75
C4A-244ENST00000460060 CNTLNQ9NXG0 1405 aa19.71■□□□□ 0.75
C4A-244ENST00000460060 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
C4A-244ENST00000460060 ZNF777Q9ULD5 760 aaPredicted RBP19.68■□□□□ 0.74
C4A-244ENST00000460060 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
C4A-244ENST00000460060 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
C4A-244ENST00000460060 SAMD9LQ8IVG5 1584 aa19.67■□□□□ 0.74
C4A-244ENST00000460060 ILDR2Q71H61 639 aa19.67■□□□□ 0.74
C4A-244ENST00000460060 NCOA1Q15788 1441 aa19.67■□□□□ 0.74
C4A-244ENST00000460060 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
C4A-244ENST00000460060 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
C4A-244ENST00000460060 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.74
C4A-244ENST00000460060 SPAG9O60271 1321 aaKnown RBP19.65■□□□□ 0.74
C4A-244ENST00000460060 ZMYM3Q14202 1370 aa19.65■□□□□ 0.74
C4A-244ENST00000460060 GPATCH8Q9UKJ3 1502 aaKnown RBP19.65■□□□□ 0.74
C4A-244ENST00000460060 NPATQ14207 1427 aa19.64■□□□□ 0.73
C4A-244ENST00000460060 MROH2AA6NES4 1674 aa19.63■□□□□ 0.73
C4A-244ENST00000460060 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
C4A-244ENST00000460060 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
C4A-244ENST00000460060 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
C4A-244ENST00000460060 CAMSAP1Q5T5Y3 1602 aa19.61■□□□□ 0.73
C4A-244ENST00000460060 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
C4A-244ENST00000460060 SOCS7O14512 581 aa19.59■□□□□ 0.73
C4A-244ENST00000460060 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
C4A-244ENST00000460060 EHBP1L1Q8N3D4 1523 aa19.59■□□□□ 0.73
C4A-244ENST00000460060 NCKAP5LQ9HCH0 1330 aa19.58■□□□□ 0.73
C4A-244ENST00000460060 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
C4A-244ENST00000460060 PLEKHH2Q8IVE3 1493 aa19.57■□□□□ 0.72
C4A-244ENST00000460060 A2MP01023 1474 aa19.56■□□□□ 0.72
C4A-244ENST00000460060 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
C4A-244ENST00000460060 GGT6Q6P531 493 aa19.55■□□□□ 0.72
C4A-244ENST00000460060 CLTCQ00610 1675 aaKnown RBP19.55■□□□□ 0.72
C4A-244ENST00000460060 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
C4A-244ENST00000460060 INO80Q9ULG1 1556 aaPredicted RBP19.54■□□□□ 0.72
C4A-244ENST00000460060 PKD2Q13563 968 aa19.54■□□□□ 0.72
C4A-244ENST00000460060 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
C4A-244ENST00000460060 PTPRKQ15262 1439 aa19.53■□□□□ 0.72
C4A-244ENST00000460060 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.72
C4A-244ENST00000460060 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
C4A-244ENST00000460060 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
C4A-244ENST00000460060 NCOA2Q15596 1464 aa19.51■□□□□ 0.71
C4A-244ENST00000460060 ZNF142P52746 1687 aaPredicted RBP19.5■□□□□ 0.71
C4A-244ENST00000460060 MYO3AQ8NEV4 1616 aa19.49■□□□□ 0.71
C4A-244ENST00000460060 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
C4A-244ENST00000460060 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
C4A-244ENST00000460060 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms