RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 FHOD3Q2V2M9 1422 aa7.25□□□□□ -1.25
RGPD6-206ENST00000459645 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
RGPD6-206ENST00000459645 FER1L4A9Z1Z3 1794 aa7.24□□□□□ -1.25
RGPD6-206ENST00000459645 POTEAQ6S8J7 498 aa7.24□□□□□ -1.25
RGPD6-206ENST00000459645 SENP3Q9H4L4 574 aaPredicted RBP7.24□□□□□ -1.25
RGPD6-206ENST00000459645 KIF27Q86VH2 1401 aa7.24□□□□□ -1.25
RGPD6-206ENST00000459645 ABCA8O94911 1581 aa7.24□□□□□ -1.25
RGPD6-206ENST00000459645 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
RGPD6-206ENST00000459645 ZFYVE16Q7Z3T8 1539 aa7.23□□□□□ -1.25
RGPD6-206ENST00000459645 ATP10BO94823 1461 aa7.22□□□□□ -1.25
RGPD6-206ENST00000459645 TOM1O60784 492 aa7.2□□□□□ -1.26
RGPD6-206ENST00000459645 RICTORQ6R327 1708 aa7.2□□□□□ -1.26
RGPD6-206ENST00000459645 ZMYM4Q5VZL5 1548 aa7.2□□□□□ -1.26
RGPD6-206ENST00000459645 EFCAB5A4FU69 1503 aa7.19□□□□□ -1.26
RGPD6-206ENST00000459645 TRAPPC8Q9Y2L5 1435 aa7.18□□□□□ -1.26
RGPD6-206ENST00000459645 ATP10AO60312 1499 aa7.18□□□□□ -1.26
RGPD6-206ENST00000459645 CAMSAP1Q5T5Y3 1602 aa7.18□□□□□ -1.26
RGPD6-206ENST00000459645 MAGI2Q86UL8 1455 aa7.17□□□□□ -1.26
RGPD6-206ENST00000459645 HECW1Q76N89 1606 aa7.17□□□□□ -1.26
RGPD6-206ENST00000459645 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
RGPD6-206ENST00000459645 ALKQ9UM73 1620 aa7.16□□□□□ -1.26
RGPD6-206ENST00000459645 UPF1Q92900 1129 aaKnown RBP eCLIP7.16□□□□□ -1.26
RGPD6-206ENST00000459645 PPP6R1Q9UPN7 881 aa7.15□□□□□ -1.26
RGPD6-206ENST00000459645 PKD2Q13563 968 aa7.14□□□□□ -1.27
RGPD6-206ENST00000459645 SETD1BQ9UPS6 1966 aaKnown RBP7.14□□□□□ -1.27
RGPD6-206ENST00000459645 SETD1AO15047 1707 aaKnown RBP7.13□□□□□ -1.27
RGPD6-206ENST00000459645 TCOF1Q13428 1488 aaKnown RBP7.13□□□□□ -1.27
RGPD6-206ENST00000459645 SCAPERQ9BY12 1400 aa7.13□□□□□ -1.27
RGPD6-206ENST00000459645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.13□□□□□ -1.27
RGPD6-206ENST00000459645 HNRNPUL2Q1KMD3 747 aaKnown RBP7.13□□□□□ -1.27
RGPD6-206ENST00000459645 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
RGPD6-206ENST00000459645 P3H3Q8IVL6 736 aa7.12□□□□□ -1.27
RGPD6-206ENST00000459645 C3P01024 1663 aa7.12□□□□□ -1.27
RGPD6-206ENST00000459645 RAPGEF2Q9Y4G8 1499 aa7.11□□□□□ -1.27
RGPD6-206ENST00000459645 PTPRKQ15262 1439 aa7.11□□□□□ -1.27
RGPD6-206ENST00000459645 PLA2R1Q13018 1463 aa7.11□□□□□ -1.27
RGPD6-206ENST00000459645 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
RGPD6-206ENST00000459645 CPS1P31327 1500 aa7.1□□□□□ -1.27
RGPD6-206ENST00000459645 SHANK2Q9UPX8 1470 aa7.1□□□□□ -1.27
RGPD6-206ENST00000459645 NPATQ14207 1427 aa7.09□□□□□ -1.28
RGPD6-206ENST00000459645 AFAP1Q8N556 730 aa7.08□□□□□ -1.28
RGPD6-206ENST00000459645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.07□□□□□ -1.28
RGPD6-206ENST00000459645 PRKCSHP14314 528 aaPredicted RBP7.07□□□□□ -1.28
RGPD6-206ENST00000459645 CFAP74Q9C0B2 1584 aa7.07□□□□□ -1.28
RGPD6-206ENST00000459645 NUP153P49790 1475 aaKnown RBP7.06□□□□□ -1.28
RGPD6-206ENST00000459645 TRIM52Q96A61 297 aa7.06□□□□□ -1.28
RGPD6-206ENST00000459645 ZMYM3Q14202 1370 aa7.06□□□□□ -1.28
RGPD6-206ENST00000459645 CNTLNQ9NXG0 1405 aa7.05□□□□□ -1.28
RGPD6-206ENST00000459645 PLEKHD1A6NEE1 506 aa7.05□□□□□ -1.28
RGPD6-206ENST00000459645 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
RGPD6-206ENST00000459645 DIP2CQ9Y2E4 1556 aa7.04□□□□□ -1.28
RGPD6-206ENST00000459645 PLCH2O75038 1416 aa7.04□□□□□ -1.28
RGPD6-206ENST00000459645 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
RGPD6-206ENST00000459645 AGLP35573 1532 aa7.04□□□□□ -1.28
RGPD6-206ENST00000459645 VWDEQ8N2E2 1590 aa7.03□□□□□ -1.28
RGPD6-206ENST00000459645 CEP170BQ9Y4F5 1589 aaPredicted RBP7.03□□□□□ -1.28
RGPD6-206ENST00000459645 NCBP3Q53F19 620 aaKnown RBP7.03□□□□□ -1.28
RGPD6-206ENST00000459645 FAM9AQ8IZU1 332 aaPredicted RBP7.03□□□□□ -1.28
RGPD6-206ENST00000459645 NEURL4Q96JN8 1562 aa7.03□□□□□ -1.28
RGPD6-206ENST00000459645 LRRC7Q96NW7 1537 aa7.02□□□□□ -1.29
RGPD6-206ENST00000459645 ZNF518AQ6AHZ1 1483 aa7.02□□□□□ -1.29
RGPD6-206ENST00000459645 MYO3AQ8NEV4 1616 aa7.01□□□□□ -1.29
RGPD6-206ENST00000459645 RAPGEF6Q8TEU7 1601 aa7.01□□□□□ -1.29
RGPD6-206ENST00000459645 REREQ9P2R6 1566 aa7.01□□□□□ -1.29
RGPD6-206ENST00000459645 EFCAB2Q5VUJ9 269 aa7.01□□□□□ -1.29
RGPD6-206ENST00000459645 ABCA6Q8N139 1617 aa7.01□□□□□ -1.29
RGPD6-206ENST00000459645 ZNF142P52746 1687 aaPredicted RBP7□□□□□ -1.29
RGPD6-206ENST00000459645 KDM5CP41229 1560 aa7□□□□□ -1.29
RGPD6-206ENST00000459645 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
RGPD6-206ENST00000459645 CTTNBP2Q8WZ74 1663 aa6.98□□□□□ -1.29
RGPD6-206ENST00000459645 FAM135BQ49AJ0 1406 aa6.98□□□□□ -1.29
RGPD6-206ENST00000459645 SETBP1Q9Y6X0 1596 aa6.98□□□□□ -1.29
RGPD6-206ENST00000459645 MLH3Q9UHC1 1453 aa6.98□□□□□ -1.29
RGPD6-206ENST00000459645 RNF17Q9BXT8 1623 aaKnown RBP6.98□□□□□ -1.29
RGPD6-206ENST00000459645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.97□□□□□ -1.29
RGPD6-206ENST00000459645 NPHP4O75161 1426 aaPredicted RBP6.97□□□□□ -1.29
RGPD6-206ENST00000459645 IFFO2Q5TF58 517 aa6.97□□□□□ -1.29
RGPD6-206ENST00000459645 ANKLE2Q86XL3 938 aa6.97□□□□□ -1.29
RGPD6-206ENST00000459645 ARXQ96QS3 562 aa6.97□□□□□ -1.29
RGPD6-206ENST00000459645 DNMT1P26358 1616 aaKnown RBP6.97□□□□□ -1.29
RGPD6-206ENST00000459645 RBM33Q96EV2 1170 aaKnown RBP6.96□□□□□ -1.3
RGPD6-206ENST00000459645 ZRANB1Q9UGI0 708 aa6.96□□□□□ -1.3
RGPD6-206ENST00000459645 RXRBP28702 533 aa6.95□□□□□ -1.3
RGPD6-206ENST00000459645 MROH2AA6NES4 1674 aa6.95□□□□□ -1.3
RGPD6-206ENST00000459645 STRCP1A6NGW2 1772 aa6.95□□□□□ -1.3
RGPD6-206ENST00000459645 LRP6O75581 1613 aa6.94□□□□□ -1.3
RGPD6-206ENST00000459645 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
RGPD6-206ENST00000459645 ZNF772Q68DY9 489 aaPredicted RBP6.94□□□□□ -1.3
RGPD6-206ENST00000459645 SUPT6HQ7KZ85 1726 aaKnown RBP6.93□□□□□ -1.3
RGPD6-206ENST00000459645 MED14O60244 1454 aa6.93□□□□□ -1.3
RGPD6-206ENST00000459645 CDK13Q14004 1512 aaKnown RBP6.93□□□□□ -1.3
RGPD6-206ENST00000459645 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
RGPD6-206ENST00000459645 SAMD9Q5K651 1589 aa6.93□□□□□ -1.3
RGPD6-206ENST00000459645 ABCC1P33527 1531 aa6.92□□□□□ -1.3
RGPD6-206ENST00000459645 GGT6Q6P531 493 aa6.92□□□□□ -1.3
RGPD6-206ENST00000459645 CLTCQ00610 1675 aaKnown RBP6.92□□□□□ -1.3
RGPD6-206ENST00000459645 TNRQ92752 1358 aa6.92□□□□□ -1.3
RGPD6-206ENST00000459645 JCADQ9P266 1359 aa6.92□□□□□ -1.3
RGPD6-206ENST00000459645 PRXQ9BXM0 1461 aa6.92□□□□□ -1.3
RGPD6-206ENST00000459645 CDK12Q9NYV4 1490 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms