RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 PTPRGP23470 1445 aa13.95□□□□□ -0.18
AMBRA1-202ENST00000458649 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
AMBRA1-202ENST00000458649 CFTRP13569 1480 aa13.94□□□□□ -0.18
AMBRA1-202ENST00000458649 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
AMBRA1-202ENST00000458649 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
AMBRA1-202ENST00000458649 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
AMBRA1-202ENST00000458649 KIF3BO15066 747 aa13.93□□□□□ -0.18
AMBRA1-202ENST00000458649 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-202ENST00000458649 FOXD1Q16676 465 aa13.93□□□□□ -0.18
AMBRA1-202ENST00000458649 NAP1L5Q96NT1 182 aaPredicted RBP13.93□□□□□ -0.18
AMBRA1-202ENST00000458649 WASHC2CQ9Y4E1 1318 aa13.92□□□□□ -0.18
AMBRA1-202ENST00000458649 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
AMBRA1-202ENST00000458649 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
AMBRA1-202ENST00000458649 NUP155O75694 1391 aa13.9□□□□□ -0.18
AMBRA1-202ENST00000458649 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
AMBRA1-202ENST00000458649 MS4A1P11836 297 aa13.89□□□□□ -0.19
AMBRA1-202ENST00000458649 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-202ENST00000458649 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
AMBRA1-202ENST00000458649 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-202ENST00000458649 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
AMBRA1-202ENST00000458649 KIF21BO75037 1637 aa13.87□□□□□ -0.19
AMBRA1-202ENST00000458649 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
AMBRA1-202ENST00000458649 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-202ENST00000458649 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.196e-8■■■■□ 25.5
AMBRA1-202ENST00000458649 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-202ENST00000458649 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-202ENST00000458649 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
AMBRA1-202ENST00000458649 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
AMBRA1-202ENST00000458649 STK26Q9P289 416 aa13.84□□□□□ -0.19
AMBRA1-202ENST00000458649 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
AMBRA1-202ENST00000458649 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.19
AMBRA1-202ENST00000458649 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-202ENST00000458649 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
AMBRA1-202ENST00000458649 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
AMBRA1-202ENST00000458649 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-202ENST00000458649 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
AMBRA1-202ENST00000458649 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
AMBRA1-202ENST00000458649 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
AMBRA1-202ENST00000458649 DEKP35659 375 aaKnown RBP13.82□□□□□ -0.2
AMBRA1-202ENST00000458649 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
AMBRA1-202ENST00000458649 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
AMBRA1-202ENST00000458649 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-202ENST00000458649 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
AMBRA1-202ENST00000458649 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
AMBRA1-202ENST00000458649 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-202ENST00000458649 FAM69CQ0P6D2 419 aa13.8□□□□□ -0.2
AMBRA1-202ENST00000458649 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-202ENST00000458649 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
AMBRA1-202ENST00000458649 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■■■■■ 29
AMBRA1-202ENST00000458649 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
AMBRA1-202ENST00000458649 SOX12O15370 315 aa13.78□□□□□ -0.2
AMBRA1-202ENST00000458649 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
AMBRA1-202ENST00000458649 NESP48681 1621 aa13.77□□□□□ -0.2
AMBRA1-202ENST00000458649 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
AMBRA1-202ENST00000458649 CUX1P39880 1505 aa13.77□□□□□ -0.21
AMBRA1-202ENST00000458649 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-202ENST00000458649 OS9Q13438 667 aaPredicted RBP13.76□□□□□ -0.21
AMBRA1-202ENST00000458649 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
AMBRA1-202ENST00000458649 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
AMBRA1-202ENST00000458649 ROCK2O75116 1388 aaKnown RBP13.75□□□□□ -0.21
AMBRA1-202ENST00000458649 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
AMBRA1-202ENST00000458649 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
AMBRA1-202ENST00000458649 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
AMBRA1-202ENST00000458649 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
AMBRA1-202ENST00000458649 BECN1Q14457 450 aa13.74□□□□□ -0.21
AMBRA1-202ENST00000458649 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
AMBRA1-202ENST00000458649 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
AMBRA1-202ENST00000458649 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
AMBRA1-202ENST00000458649 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
AMBRA1-202ENST00000458649 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
AMBRA1-202ENST00000458649 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
AMBRA1-202ENST00000458649 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
AMBRA1-202ENST00000458649 DNTTIP2Q5QJE6 756 aaKnown RBP13.71□□□□□ -0.21
AMBRA1-202ENST00000458649 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
AMBRA1-202ENST00000458649 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.22
AMBRA1-202ENST00000458649 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
AMBRA1-202ENST00000458649 IFT140Q96RY7 1462 aa13.69□□□□□ -0.22
AMBRA1-202ENST00000458649 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
AMBRA1-202ENST00000458649 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
AMBRA1-202ENST00000458649 RALBP1Q15311 655 aa13.68□□□□□ -0.22
AMBRA1-202ENST00000458649 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
AMBRA1-202ENST00000458649 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
AMBRA1-202ENST00000458649 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
AMBRA1-202ENST00000458649 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
AMBRA1-202ENST00000458649 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
AMBRA1-202ENST00000458649 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
AMBRA1-202ENST00000458649 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
AMBRA1-202ENST00000458649 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 RRBP1Q9P2E9 1410 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 AMPHP49418 695 aa13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
AMBRA1-202ENST00000458649 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
AMBRA1-202ENST00000458649 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
AMBRA1-202ENST00000458649 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-202ENST00000458649 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-202ENST00000458649 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
AMBRA1-202ENST00000458649 FGD1P98174 961 aa13.62□□□□□ -0.23
AMBRA1-202ENST00000458649 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms