RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 TOMM22Q9NS69 142 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 PIP4K2BP78356 416 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 MARCH6O60337 910 aa9.09□□□□□ -0.95
CLSTN2-201ENST00000458420 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
CLSTN2-201ENST00000458420 PNNQ9H307 717 aaKnown RBP9.08□□□□□ -0.96
CLSTN2-201ENST00000458420 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
CLSTN2-201ENST00000458420 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
CLSTN2-201ENST00000458420 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
CLSTN2-201ENST00000458420 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
CLSTN2-201ENST00000458420 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
CLSTN2-201ENST00000458420 GOLGA6L4A6NEF3 574 aa9.06□□□□□ -0.96
CLSTN2-201ENST00000458420 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 DRC7Q8IY82 874 aa9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 RGS3P49796 1198 aa9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 BECN1Q14457 450 aa9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
CLSTN2-201ENST00000458420 CYB5RLQ6IPT4 315 aa9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 VSIG10Q8N0Z9 540 aa9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 A0A0U1RQG5 324 aaPredicted RBP9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 HSP90AB1P08238 724 aaKnown RBP9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 PAXIP1Q6ZW49 1069 aaPredicted RBP9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 CCAR1Q8IX12 1150 aaKnown RBP9.04□□□□□ -0.96
CLSTN2-201ENST00000458420 GOLGA6L6A8MZA4 724 aa9.03□□□□□ -0.96
CLSTN2-201ENST00000458420 EID1Q9Y6B2 187 aa9.03□□□□□ -0.96
CLSTN2-201ENST00000458420 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
CLSTN2-201ENST00000458420 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
CLSTN2-201ENST00000458420 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.96
CLSTN2-201ENST00000458420 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.96
CLSTN2-201ENST00000458420 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.96
CLSTN2-201ENST00000458420 L1TD1Q5T7N2 865 aaKnown RBP9.02□□□□□ -0.97
CLSTN2-201ENST00000458420 ARID3AQ99856 593 aa9.02□□□□□ -0.97
CLSTN2-201ENST00000458420 GLIPR1L2Q4G1C9 344 aa9.01□□□□□ -0.97
CLSTN2-201ENST00000458420 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
CLSTN2-201ENST00000458420 SLC4A10Q6U841 1118 aa8.98□□□□□ -0.97
CLSTN2-201ENST00000458420 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
CLSTN2-201ENST00000458420 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
CLSTN2-201ENST00000458420 PES1O00541 588 aaKnown RBP8.98□□□□□ -0.97
CLSTN2-201ENST00000458420 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 AMPHP49418 695 aa8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 PAF1Q8N7H5 531 aa8.97□□□□□ -0.97
CLSTN2-201ENST00000458420 FAM177BA6PVY3 158 aa8.96□□□□□ -0.97
CLSTN2-201ENST00000458420 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.97
CLSTN2-201ENST00000458420 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
CLSTN2-201ENST00000458420 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
CLSTN2-201ENST00000458420 KANK1Q14678 1352 aa8.96□□□□□ -0.98
CLSTN2-201ENST00000458420 CHAF1AQ13111 956 aaPredicted RBP8.96□□□□□ -0.98
CLSTN2-201ENST00000458420 CEP89Q96ST8 783 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 DCAF11Q8TEB1 546 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 GRM1Q13255 1194 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 MORC1Q86VD1 984 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 FYB1O15117 783 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 NRDCO43847 1150 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 VPS37DQ86XT2 251 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 B4GALNT3Q6L9W6 998 aa8.95□□□□□ -0.98
CLSTN2-201ENST00000458420 NOL10Q9BSC4 688 aaKnown RBP8.94□□□□□ -0.98
CLSTN2-201ENST00000458420 TRIM6-TRIM34B2RNG4 842 aa8.94□□□□□ -0.98
CLSTN2-201ENST00000458420 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
CLSTN2-201ENST00000458420 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
CLSTN2-201ENST00000458420 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
CLSTN2-201ENST00000458420 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■■■■ 96.1
CLSTN2-201ENST00000458420 MCCP23508 829 aa8.92□□□□□ -0.98
CLSTN2-201ENST00000458420 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
CLSTN2-201ENST00000458420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
CLSTN2-201ENST00000458420 FOXD1Q16676 465 aa8.91□□□□□ -0.98
CLSTN2-201ENST00000458420 ZNF428Q96B54 188 aa8.91□□□□□ -0.98
CLSTN2-201ENST00000458420 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
CLSTN2-201ENST00000458420 CHMP4BP1P59074 171 aa8.9□□□□□ -0.98
CLSTN2-201ENST00000458420 STRN4Q9NRL3 753 aa8.9□□□□□ -0.99
CLSTN2-201ENST00000458420 KDM4AO75164 1064 aa8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 SPDYE4A6NLX3 237 aa8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 C1orf141Q5JVX7 400 aa8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 TCERG1O14776 1098 aaKnown RBP8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 PSME1Q06323 249 aa8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 IKQ13123 557 aaPredicted RBP8.89□□□□□ -0.99
CLSTN2-201ENST00000458420 U2AF1L5P0DN76 240 aaPredicted RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 U2AF1Q01081 240 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 FOXD4L4Q8WXT5 416 aaPredicted RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 CCDC43Q96MW1 224 aaKnown RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 SPAG9O60271 1321 aaKnown RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 EIF2S2P20042 333 aaKnown RBP8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 ATF3P18847 181 aa8.88□□□□□ -0.99
CLSTN2-201ENST00000458420 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 PLIN1O60240 522 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 TMF1P82094 1093 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
CLSTN2-201ENST00000458420 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms