RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 KIAA0556O60303 1618 aa13.66□□□□□ -0.22
ITGA6-207ENST00000458358 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
ITGA6-207ENST00000458358 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
ITGA6-207ENST00000458358 OSCARQ8IYS5 282 aa13.65□□□□□ -0.23
ITGA6-207ENST00000458358 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
ITGA6-207ENST00000458358 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
ITGA6-207ENST00000458358 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
ITGA6-207ENST00000458358 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
ITGA6-207ENST00000458358 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
ITGA6-207ENST00000458358 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
ITGA6-207ENST00000458358 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
ITGA6-207ENST00000458358 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
ITGA6-207ENST00000458358 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
ITGA6-207ENST00000458358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.236e-8■■□□□ 12
ITGA6-207ENST00000458358 NBR1Q14596 966 aa13.59□□□□□ -0.23
ITGA6-207ENST00000458358 CYB5RLQ6IPT4 315 aa13.58□□□□□ -0.24
ITGA6-207ENST00000458358 CHD1O14646 1710 aa13.58□□□□□ -0.24
ITGA6-207ENST00000458358 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
ITGA6-207ENST00000458358 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
ITGA6-207ENST00000458358 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
ITGA6-207ENST00000458358 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
ITGA6-207ENST00000458358 CCDC184Q52MB2 194 aa13.57□□□□□ -0.24
ITGA6-207ENST00000458358 ATP10BO94823 1461 aa13.57□□□□□ -0.24
ITGA6-207ENST00000458358 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
ITGA6-207ENST00000458358 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
ITGA6-207ENST00000458358 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
ITGA6-207ENST00000458358 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
ITGA6-207ENST00000458358 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
ITGA6-207ENST00000458358 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
ITGA6-207ENST00000458358 TROQ12816 1431 aaPredicted RBP13.55□□□□□ -0.24
ITGA6-207ENST00000458358 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
ITGA6-207ENST00000458358 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
ITGA6-207ENST00000458358 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
ITGA6-207ENST00000458358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
ITGA6-207ENST00000458358 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
ITGA6-207ENST00000458358 MRS2Q9HD23 443 aa13.53□□□□□ -0.24
ITGA6-207ENST00000458358 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.25
ITGA6-207ENST00000458358 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
ITGA6-207ENST00000458358 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
ITGA6-207ENST00000458358 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
ITGA6-207ENST00000458358 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
ITGA6-207ENST00000458358 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
ITGA6-207ENST00000458358 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
ITGA6-207ENST00000458358 NAIPQ13075 1403 aa13.49□□□□□ -0.25
ITGA6-207ENST00000458358 KIF14Q15058 1648 aa13.47□□□□□ -0.25
ITGA6-207ENST00000458358 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
ITGA6-207ENST00000458358 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
ITGA6-207ENST00000458358 GPATCH8Q9UKJ3 1502 aaKnown RBP13.46□□□□□ -0.25
ITGA6-207ENST00000458358 ABCC5O15440 1437 aa13.45□□□□□ -0.26
ITGA6-207ENST00000458358 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
ITGA6-207ENST00000458358 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
ITGA6-207ENST00000458358 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
ITGA6-207ENST00000458358 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
ITGA6-207ENST00000458358 DAPK1P53355 1430 aa13.44□□□□□ -0.26
ITGA6-207ENST00000458358 CNTLNQ9NXG0 1405 aa13.44□□□□□ -0.26
ITGA6-207ENST00000458358 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
ITGA6-207ENST00000458358 PKD2Q13563 968 aa13.43□□□□□ -0.26
ITGA6-207ENST00000458358 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
ITGA6-207ENST00000458358 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
ITGA6-207ENST00000458358 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
ITGA6-207ENST00000458358 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
ITGA6-207ENST00000458358 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
ITGA6-207ENST00000458358 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
ITGA6-207ENST00000458358 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
ITGA6-207ENST00000458358 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
ITGA6-207ENST00000458358 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
ITGA6-207ENST00000458358 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
ITGA6-207ENST00000458358 ABCA8O94911 1581 aa13.4□□□□□ -0.26
ITGA6-207ENST00000458358 NUP155O75694 1391 aa13.4□□□□□ -0.26
ITGA6-207ENST00000458358 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
ITGA6-207ENST00000458358 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
ITGA6-207ENST00000458358 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
ITGA6-207ENST00000458358 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
ITGA6-207ENST00000458358 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
ITGA6-207ENST00000458358 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
ITGA6-207ENST00000458358 KDM6BO15054 1643 aa13.36□□□□□ -0.27
ITGA6-207ENST00000458358 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
ITGA6-207ENST00000458358 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
ITGA6-207ENST00000458358 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
ITGA6-207ENST00000458358 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
ITGA6-207ENST00000458358 NCOA1Q15788 1441 aa13.34□□□□□ -0.27
ITGA6-207ENST00000458358 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.27
ITGA6-207ENST00000458358 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.27
ITGA6-207ENST00000458358 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
ITGA6-207ENST00000458358 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
ITGA6-207ENST00000458358 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
ITGA6-207ENST00000458358 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
ITGA6-207ENST00000458358 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
ITGA6-207ENST00000458358 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
ITGA6-207ENST00000458358 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
ITGA6-207ENST00000458358 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
ITGA6-207ENST00000458358 DENND4BO75064 1496 aaPredicted RBP13.31□□□□□ -0.28
ITGA6-207ENST00000458358 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
ITGA6-207ENST00000458358 ABCC10Q5T3U5 1492 aa13.3□□□□□ -0.28
ITGA6-207ENST00000458358 KIF3BO15066 747 aa13.3□□□□□ -0.28
ITGA6-207ENST00000458358 GGT6Q6P531 493 aa13.3□□□□□ -0.28
ITGA6-207ENST00000458358 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
ITGA6-207ENST00000458358 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
ITGA6-207ENST00000458358 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
ITGA6-207ENST00000458358 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms