RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 CCDC18Q5T9S5 1454 aa8.3□□□□□ -1.08
PTBP3-207ENST00000458258 TROQ12816 1431 aaPredicted RBP8.3□□□□□ -1.08
PTBP3-207ENST00000458258 CUL7Q14999 1698 aa8.3□□□□□ -1.08
PTBP3-207ENST00000458258 RAPGEF3O95398 923 aa8.3□□□□□ -1.08
PTBP3-207ENST00000458258 HFM1A2PYH4 1435 aa8.29□□□□□ -1.08
PTBP3-207ENST00000458258 DAPK1P53355 1430 aa8.29□□□□□ -1.08
PTBP3-207ENST00000458258 TRAPPC8Q9Y2L5 1435 aa8.28□□□□□ -1.08
PTBP3-207ENST00000458258 NBPF1Q3BBV0 1214 aa8.28□□□□□ -1.08
PTBP3-207ENST00000458258 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
PTBP3-207ENST00000458258 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
PTBP3-207ENST00000458258 UACAQ9BZF9 1416 aa8.28□□□□□ -1.08
PTBP3-207ENST00000458258 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
PTBP3-207ENST00000458258 ABCC10Q5T3U5 1492 aa8.27□□□□□ -1.09
PTBP3-207ENST00000458258 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
PTBP3-207ENST00000458258 POLR3GLQ9BT43 218 aa8.27□□□□□ -1.09
PTBP3-207ENST00000458258 CARMIL2Q6F5E8 1435 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 PRDM2Q13029 1718 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 NCOA1Q15788 1441 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
PTBP3-207ENST00000458258 NUP155O75694 1391 aa8.23□□□□□ -1.09
PTBP3-207ENST00000458258 CDK11AQ9UQ88 783 aaPredicted RBP8.23□□□□□ -1.09
PTBP3-207ENST00000458258 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
PTBP3-207ENST00000458258 CAMSAP2Q08AD1 1489 aa8.23□□□□□ -1.09
PTBP3-207ENST00000458258 PLEKHH2Q8IVE3 1493 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 PZPP20742 1482 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 MYT1LQ9UL68 1186 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 ABCA8O94911 1581 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
PTBP3-207ENST00000458258 TCOF1Q13428 1488 aaKnown RBP8.22□□□□□ -1.09
PTBP3-207ENST00000458258 AKNAQ7Z591 1439 aa8.21□□□□□ -1.09
PTBP3-207ENST00000458258 PTPN23Q9H3S7 1636 aa8.21□□□□□ -1.1
PTBP3-207ENST00000458258 EHBP1L1Q8N3D4 1523 aa8.21□□□□□ -1.1
PTBP3-207ENST00000458258 PLA2R1Q13018 1463 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 TSPY4P0CV99 314 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 TSPY10P0CW01 314 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 TONSLQ96HA7 1378 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 CTTNBP2Q8WZ74 1663 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 RAPGEF6Q8TEU7 1601 aa8.2□□□□□ -1.1
PTBP3-207ENST00000458258 KIF15Q9NS87 1388 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 CFAP43Q8NDM7 1665 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 DCAF11Q8TEB1 546 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 ABCC2Q92887 1545 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
PTBP3-207ENST00000458258 SCAPERQ9BY12 1400 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 GGT6Q6P531 493 aa8.19□□□□□ -1.1
PTBP3-207ENST00000458258 KIF3BO15066 747 aa8.18□□□□□ -1.1
PTBP3-207ENST00000458258 PLPPR3Q6T4P5 718 aa8.18□□□□□ -1.1
PTBP3-207ENST00000458258 MIA2Q96PC5 1412 aa8.17□□□□□ -1.1
PTBP3-207ENST00000458258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTBP3-207ENST00000458258 C9orf84Q5VXU9 1444 aa8.17□□□□□ -1.1
PTBP3-207ENST00000458258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.11e-8■□□□□ 9.9
PTBP3-207ENST00000458258 MLECQ14165 292 aa8.16□□□□□ -1.1
PTBP3-207ENST00000458258 HECW1Q76N89 1606 aa8.16□□□□□ -1.1
PTBP3-207ENST00000458258 TTC37Q6PGP7 1564 aa8.15□□□□□ -1.1
PTBP3-207ENST00000458258 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
PTBP3-207ENST00000458258 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.11
PTBP3-207ENST00000458258 SYCP2Q9BX26 1530 aa8.15□□□□□ -1.11
PTBP3-207ENST00000458258 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
PTBP3-207ENST00000458258 ASXL2Q76L83 1435 aa8.14□□□□□ -1.11
PTBP3-207ENST00000458258 EFCAB2Q5VUJ9 269 aa8.14□□□□□ -1.11
PTBP3-207ENST00000458258 BCANQ96GW7 911 aa8.14□□□□□ -1.11
PTBP3-207ENST00000458258 IRX6P78412 446 aaPredicted RBP8.14□□□□□ -1.11
PTBP3-207ENST00000458258 COL17A1Q9UMD9 1497 aaPredicted RBP8.13□□□□□ -1.11
PTBP3-207ENST00000458258 CHD1O14646 1710 aa8.13□□□□□ -1.11
PTBP3-207ENST00000458258 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
PTBP3-207ENST00000458258 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
PTBP3-207ENST00000458258 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
PTBP3-207ENST00000458258 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
PTBP3-207ENST00000458258 SPAG9O60271 1321 aaKnown RBP8.12□□□□□ -1.11
PTBP3-207ENST00000458258 SAMD9LQ8IVG5 1584 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 SUPT6HQ7KZ85 1726 aaKnown RBP8.11□□□□□ -1.11
PTBP3-207ENST00000458258 CLSPNQ9HAW4 1339 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 CHGAP10645 457 aaKnown RBP8.11□□□□□ -1.11
PTBP3-207ENST00000458258 PLCH2O75038 1416 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 YEATS2Q9ULM3 1422 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 UGGT1Q9NYU2 1555 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 CFAP70Q5T0N1 1121 aa8.11□□□□□ -1.11
PTBP3-207ENST00000458258 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
PTBP3-207ENST00000458258 ARHGAP5Q13017 1502 aa8.1□□□□□ -1.11
PTBP3-207ENST00000458258 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
PTBP3-207ENST00000458258 TEX14Q8IWB6 1497 aa8.09□□□□□ -1.11
PTBP3-207ENST00000458258 SAFB2Q14151 953 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTBP3-207ENST00000458258 CEBPAP49715 358 aaPredicted RBP8.08□□□□□ -1.12
PTBP3-207ENST00000458258 ROCK1Q13464 1354 aa8.08□□□□□ -1.12
PTBP3-207ENST00000458258 CARD11Q9BXL7 1154 aa8.07□□□□□ -1.12
PTBP3-207ENST00000458258 FAM9BQ8IZU0 186 aa8.07□□□□□ -1.12
PTBP3-207ENST00000458258 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
PTBP3-207ENST00000458258 KIAA1107Q9UPP5 1409 aa8.07□□□□□ -1.12
PTBP3-207ENST00000458258 FBLN1P23142 703 aa8.06□□□□□ -1.12
PTBP3-207ENST00000458258 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
PTBP3-207ENST00000458258 A2MP01023 1474 aa8.06□□□□□ -1.12
PTBP3-207ENST00000458258 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.123e-6■■■□□ 14.7
PTBP3-207ENST00000458258 NPM1P06748 294 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTBP3-207ENST00000458258 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
PTBP3-207ENST00000458258 FANCAO15360 1455 aa8.04□□□□□ -1.12
PTBP3-207ENST00000458258 NCKAP5LQ9HCH0 1330 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms