RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CDC42BPAQ5VT25 1732 aa23.94■■□□□ 1.42
CAPN13-203ENST00000458085 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
CAPN13-203ENST00000458085 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
CAPN13-203ENST00000458085 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
CAPN13-203ENST00000458085 ZNF777Q9ULD5 760 aaPredicted RBP23.93■■□□□ 1.42
CAPN13-203ENST00000458085 NEUROD1Q13562 356 aa23.87■■□□□ 1.41
CAPN13-203ENST00000458085 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
CAPN13-203ENST00000458085 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
CAPN13-203ENST00000458085 UHRF1BP1LA0JNW5 1464 aa23.8■■□□□ 1.4
CAPN13-203ENST00000458085 DENND4BO75064 1496 aaPredicted RBP23.8■■□□□ 1.4
CAPN13-203ENST00000458085 CROCC2H7BZ55 1655 aa23.8■■□□□ 1.4
CAPN13-203ENST00000458085 ZCCHC11Q5TAX3 1644 aaKnown RBP23.79■■□□□ 1.4
CAPN13-203ENST00000458085 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
CAPN13-203ENST00000458085 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
CAPN13-203ENST00000458085 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
CAPN13-203ENST00000458085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.77■■□□□ 1.4
CAPN13-203ENST00000458085 KDM5BQ9UGL1 1544 aa23.76■■□□□ 1.39
CAPN13-203ENST00000458085 PREX2Q70Z35 1606 aa23.76■■□□□ 1.39
CAPN13-203ENST00000458085 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
CAPN13-203ENST00000458085 ADGBQ8N7X0 1667 aa23.75■■□□□ 1.39
CAPN13-203ENST00000458085 KCNH8Q96L42 1107 aa23.73■■□□□ 1.39
CAPN13-203ENST00000458085 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
CAPN13-203ENST00000458085 SAMD9LQ8IVG5 1584 aa23.73■■□□□ 1.39
CAPN13-203ENST00000458085 HNRNPMP52272 730 aaKnown RBP eCLIP23.72■■□□□ 1.39
CAPN13-203ENST00000458085 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
CAPN13-203ENST00000458085 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
CAPN13-203ENST00000458085 MBD5Q9P267 1494 aa23.7■■□□□ 1.38
CAPN13-203ENST00000458085 TIMELESSQ9UNS1 1208 aa23.68■■□□□ 1.38
CAPN13-203ENST00000458085 C9orf84Q5VXU9 1444 aa23.68■■□□□ 1.38
CAPN13-203ENST00000458085 ANKRD30AQ9BXX3 1397 aa23.67■■□□□ 1.38
CAPN13-203ENST00000458085 SHANK2Q9UPX8 1470 aa23.67■■□□□ 1.38
CAPN13-203ENST00000458085 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
CAPN13-203ENST00000458085 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
CAPN13-203ENST00000458085 FOXD1Q16676 465 aa23.66■■□□□ 1.38
CAPN13-203ENST00000458085 MYO5CQ9NQX4 1742 aa23.65■■□□□ 1.38
CAPN13-203ENST00000458085 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
CAPN13-203ENST00000458085 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
CAPN13-203ENST00000458085 TONSLQ96HA7 1378 aa23.62■■□□□ 1.37
CAPN13-203ENST00000458085 TSPY4P0CV99 314 aa23.61■■□□□ 1.37
CAPN13-203ENST00000458085 TSPY10P0CW01 314 aa23.61■■□□□ 1.37
CAPN13-203ENST00000458085 CCDC141Q6ZP82 1450 aa23.6■■□□□ 1.37
CAPN13-203ENST00000458085 ANKRD50Q9ULJ7 1429 aa23.6■■□□□ 1.37
CAPN13-203ENST00000458085 PZPP20742 1482 aa23.59■■□□□ 1.37
CAPN13-203ENST00000458085 PLCH2O75038 1416 aa23.57■■□□□ 1.36
CAPN13-203ENST00000458085 SLC4A1APQ9BWU0 796 aaKnown RBP23.57■■□□□ 1.36
CAPN13-203ENST00000458085 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
CAPN13-203ENST00000458085 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
CAPN13-203ENST00000458085 ARHGEF12Q9NZN5 1544 aa23.55■■□□□ 1.36
CAPN13-203ENST00000458085 WDR7Q9Y4E6 1490 aa23.54■■□□□ 1.36
CAPN13-203ENST00000458085 ANKRD30BQ9BXX2 1392 aa23.54■■□□□ 1.36
CAPN13-203ENST00000458085 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
CAPN13-203ENST00000458085 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
CAPN13-203ENST00000458085 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
CAPN13-203ENST00000458085 EFCAB2Q5VUJ9 269 aa23.49■■□□□ 1.35
CAPN13-203ENST00000458085 MIER1Q8N108 512 aa23.48■■□□□ 1.35
CAPN13-203ENST00000458085 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
CAPN13-203ENST00000458085 ASXL2Q76L83 1435 aa23.48■■□□□ 1.35
CAPN13-203ENST00000458085 ABCC1P33527 1531 aa23.46■■□□□ 1.35
CAPN13-203ENST00000458085 NUP155O75694 1391 aa23.45■■□□□ 1.34
CAPN13-203ENST00000458085 PKD2Q13563 968 aa23.44■■□□□ 1.34
CAPN13-203ENST00000458085 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
CAPN13-203ENST00000458085 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
CAPN13-203ENST00000458085 L3MBTL2Q969R5 705 aa23.42■■□□□ 1.34
CAPN13-203ENST00000458085 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
CAPN13-203ENST00000458085 ABCA9Q8IUA7 1624 aa23.42■■□□□ 1.34
CAPN13-203ENST00000458085 ARAP3Q8WWN8 1544 aa23.41■■□□□ 1.34
CAPN13-203ENST00000458085 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
CAPN13-203ENST00000458085 PLXNC1O60486 1568 aa23.39■■□□□ 1.34
CAPN13-203ENST00000458085 TEX14Q8IWB6 1497 aa23.37■■□□□ 1.33
CAPN13-203ENST00000458085 NPM1P06748 294 aaKnown RBP eCLIP23.36■■□□□ 1.33
CAPN13-203ENST00000458085 FANCAO15360 1455 aa23.36■■□□□ 1.33
CAPN13-203ENST00000458085 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
CAPN13-203ENST00000458085 FAM135AQ9P2D6 1515 aa23.32■■□□□ 1.32
CAPN13-203ENST00000458085 DUOX2Q9NRD8 1548 aa23.31■■□□□ 1.32
CAPN13-203ENST00000458085 UNC13BO14795 1591 aa23.3■■□□□ 1.32
CAPN13-203ENST00000458085 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
CAPN13-203ENST00000458085 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
CAPN13-203ENST00000458085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
CAPN13-203ENST00000458085 ZFYVE16Q7Z3T8 1539 aa23.27■■□□□ 1.32
CAPN13-203ENST00000458085 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
CAPN13-203ENST00000458085 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
CAPN13-203ENST00000458085 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
CAPN13-203ENST00000458085 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
CAPN13-203ENST00000458085 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
CAPN13-203ENST00000458085 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
CAPN13-203ENST00000458085 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
CAPN13-203ENST00000458085 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
CAPN13-203ENST00000458085 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
CAPN13-203ENST00000458085 INO80Q9ULG1 1556 aaPredicted RBP23.2■■□□□ 1.3
CAPN13-203ENST00000458085 HSPA5P11021 654 aaKnown RBP23.2■■□□□ 1.3
CAPN13-203ENST00000458085 ATP7AQ04656 1500 aa23.19■■□□□ 1.3
CAPN13-203ENST00000458085 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
CAPN13-203ENST00000458085 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
CAPN13-203ENST00000458085 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
CAPN13-203ENST00000458085 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
CAPN13-203ENST00000458085 PLA2R1Q13018 1463 aa23.16■■□□□ 1.3
CAPN13-203ENST00000458085 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
CAPN13-203ENST00000458085 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
CAPN13-203ENST00000458085 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
CAPN13-203ENST00000458085 KIDINS220Q9ULH0 1771 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms