RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 OSCARQ8IYS5 282 aa23.89■■□□□ 1.42
MBD1-210ENST00000457839 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.41
MBD1-210ENST00000457839 KDM6BO15054 1643 aa23.87■■□□□ 1.41
MBD1-210ENST00000457839 DNMT1P26358 1616 aaKnown RBP23.87■■□□□ 1.41
MBD1-210ENST00000457839 CDC42BPAQ5VT25 1732 aa23.87■■□□□ 1.41
MBD1-210ENST00000457839 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
MBD1-210ENST00000457839 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
MBD1-210ENST00000457839 GCC2Q8IWJ2 1684 aa23.81■■□□□ 1.4
MBD1-210ENST00000457839 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
MBD1-210ENST00000457839 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
MBD1-210ENST00000457839 ZCCHC11Q5TAX3 1644 aaKnown RBP23.79■■□□□ 1.4
MBD1-210ENST00000457839 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
MBD1-210ENST00000457839 UHRF1BP1LA0JNW5 1464 aa23.77■■□□□ 1.4
MBD1-210ENST00000457839 TTC37Q6PGP7 1564 aa23.77■■□□□ 1.4
MBD1-210ENST00000457839 KDM5BQ9UGL1 1544 aa23.76■■□□□ 1.39
MBD1-210ENST00000457839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.39
MBD1-210ENST00000457839 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
MBD1-210ENST00000457839 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
MBD1-210ENST00000457839 CDC42BPBQ9Y5S2 1711 aa23.73■■□□□ 1.39
MBD1-210ENST00000457839 FOXD1Q16676 465 aa23.71■■□□□ 1.39
MBD1-210ENST00000457839 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
MBD1-210ENST00000457839 PREX2Q70Z35 1606 aa23.69■■□□□ 1.38
MBD1-210ENST00000457839 MPHOSPH9Q99550 1183 aa23.69■■□□□ 1.38
MBD1-210ENST00000457839 ARHGAP5Q13017 1502 aa23.68■■□□□ 1.38
MBD1-210ENST00000457839 SAMD9LQ8IVG5 1584 aa23.68■■□□□ 1.38
MBD1-210ENST00000457839 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
MBD1-210ENST00000457839 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
MBD1-210ENST00000457839 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
MBD1-210ENST00000457839 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
MBD1-210ENST00000457839 MBD5Q9P267 1494 aa23.66■■□□□ 1.38
MBD1-210ENST00000457839 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
MBD1-210ENST00000457839 ADGRL2O95490 1459 aa23.63■■□□□ 1.37
MBD1-210ENST00000457839 ADGBQ8N7X0 1667 aa23.63■■□□□ 1.37
MBD1-210ENST00000457839 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
MBD1-210ENST00000457839 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
MBD1-210ENST00000457839 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
MBD1-210ENST00000457839 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
MBD1-210ENST00000457839 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
MBD1-210ENST00000457839 PLCH2O75038 1416 aa23.58■■□□□ 1.37
MBD1-210ENST00000457839 CCDC141Q6ZP82 1450 aa23.58■■□□□ 1.37
MBD1-210ENST00000457839 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
MBD1-210ENST00000457839 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
MBD1-210ENST00000457839 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
MBD1-210ENST00000457839 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
MBD1-210ENST00000457839 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
MBD1-210ENST00000457839 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
MBD1-210ENST00000457839 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
MBD1-210ENST00000457839 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
MBD1-210ENST00000457839 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
MBD1-210ENST00000457839 NPM1P06748 294 aaKnown RBP eCLIP23.52■■□□□ 1.36
MBD1-210ENST00000457839 RSPH4AQ5TD94 716 aa23.52■■□□□ 1.36
MBD1-210ENST00000457839 PZPP20742 1482 aa23.51■■□□□ 1.35
MBD1-210ENST00000457839 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
MBD1-210ENST00000457839 NUP155O75694 1391 aa23.47■■□□□ 1.35
MBD1-210ENST00000457839 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
MBD1-210ENST00000457839 PKD2Q13563 968 aa23.46■■□□□ 1.35
MBD1-210ENST00000457839 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
MBD1-210ENST00000457839 TRAPPC8Q9Y2L5 1435 aa23.46■■□□□ 1.35
MBD1-210ENST00000457839 AFAP1Q8N556 730 aa23.45■■□□□ 1.35
MBD1-210ENST00000457839 PLEKHH2Q8IVE3 1493 aa23.45■■□□□ 1.35
MBD1-210ENST00000457839 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
MBD1-210ENST00000457839 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
MBD1-210ENST00000457839 ABCC1P33527 1531 aa23.42■■□□□ 1.34
MBD1-210ENST00000457839 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
MBD1-210ENST00000457839 FANCAO15360 1455 aa23.4■■□□□ 1.34
MBD1-210ENST00000457839 ABCA9Q8IUA7 1624 aa23.39■■□□□ 1.34
MBD1-210ENST00000457839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.33
MBD1-210ENST00000457839 MIER1Q8N108 512 aa23.38■■□□□ 1.33
MBD1-210ENST00000457839 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
MBD1-210ENST00000457839 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
MBD1-210ENST00000457839 SPAG9O60271 1321 aaKnown RBP23.35■■□□□ 1.33
MBD1-210ENST00000457839 ARAP3Q8WWN8 1544 aa23.34■■□□□ 1.33
MBD1-210ENST00000457839 MYT1LQ9UL68 1186 aa23.32■■□□□ 1.32
MBD1-210ENST00000457839 SCAPERQ9BY12 1400 aa23.31■■□□□ 1.32
MBD1-210ENST00000457839 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
MBD1-210ENST00000457839 PLXNC1O60486 1568 aa23.3■■□□□ 1.32
MBD1-210ENST00000457839 CD109Q6YHK3 1445 aa23.28■■□□□ 1.32
MBD1-210ENST00000457839 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
MBD1-210ENST00000457839 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
MBD1-210ENST00000457839 RIMBP3CA6NJZ7 1639 aa23.27■■□□□ 1.31
MBD1-210ENST00000457839 RIMBP3BA6NNM3 1639 aa23.27■■□□□ 1.31
MBD1-210ENST00000457839 RIMBP3Q9UFD9 1639 aa23.27■■□□□ 1.31
MBD1-210ENST00000457839 DUOX2Q9NRD8 1548 aa23.26■■□□□ 1.31
MBD1-210ENST00000457839 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
MBD1-210ENST00000457839 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
MBD1-210ENST00000457839 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
MBD1-210ENST00000457839 DDX10Q13206 875 aaKnown RBP23.21■■□□□ 1.31
MBD1-210ENST00000457839 ERBINQ96RT1 1412 aa23.21■■□□□ 1.31
MBD1-210ENST00000457839 RTEL1-TNFRSF6BF6WH68 1400 aa23.2■■□□□ 1.3
MBD1-210ENST00000457839 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
MBD1-210ENST00000457839 ZNF326Q5BKZ1 582 aaKnown RBP23.2■■□□□ 1.3
MBD1-210ENST00000457839 UNC13BO14795 1591 aa23.2■■□□□ 1.3
MBD1-210ENST00000457839 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
MBD1-210ENST00000457839 HSPA5P11021 654 aaKnown RBP23.15■■□□□ 1.3
MBD1-210ENST00000457839 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
MBD1-210ENST00000457839 KIF3BO15066 747 aa23.14■■□□□ 1.29
MBD1-210ENST00000457839 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
MBD1-210ENST00000457839 RAPGEF3O95398 923 aa23.13■■□□□ 1.29
MBD1-210ENST00000457839 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
MBD1-210ENST00000457839 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms