RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
TMED4-203ENST00000457408 KDM6BO15054 1643 aa29.7■■■□□ 2.34
TMED4-203ENST00000457408 DNMT1P26358 1616 aaKnown RBP29.69■■■□□ 2.34
TMED4-203ENST00000457408 GCC2Q8IWJ2 1684 aa29.67■■■□□ 2.34
TMED4-203ENST00000457408 ABCC10Q5T3U5 1492 aa29.66■■■□□ 2.34
TMED4-203ENST00000457408 PELP1Q8IZL8 1130 aaKnown RBP29.66■■■□□ 2.34
TMED4-203ENST00000457408 KCNH8Q96L42 1107 aa29.66■■■□□ 2.34
TMED4-203ENST00000457408 AKNAQ7Z591 1439 aa29.65■■■□□ 2.34
TMED4-203ENST00000457408 CDC42BPAQ5VT25 1732 aa29.63■■■□□ 2.33
TMED4-203ENST00000457408 ABCC2Q92887 1545 aa29.62■■■□□ 2.33
TMED4-203ENST00000457408 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
TMED4-203ENST00000457408 HNRNPMP52272 730 aaKnown RBP eCLIP29.58■■■□□ 2.33
TMED4-203ENST00000457408 MPHOSPH9Q99550 1183 aa29.56■■■□□ 2.32
TMED4-203ENST00000457408 FOXD1Q16676 465 aa29.55■■■□□ 2.32
TMED4-203ENST00000457408 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
TMED4-203ENST00000457408 NCOA1Q15788 1441 aa29.51■■■□□ 2.31
TMED4-203ENST00000457408 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
TMED4-203ENST00000457408 TSPY4P0CV99 314 aa29.49■■■□□ 2.31
TMED4-203ENST00000457408 TSPY10P0CW01 314 aa29.49■■■□□ 2.31
TMED4-203ENST00000457408 OSCARQ8IYS5 282 aa29.49■■■□□ 2.31
TMED4-203ENST00000457408 PPP1R15AO75807 674 aaPredicted RBP29.48■■■□□ 2.31
TMED4-203ENST00000457408 ANKRD30AQ9BXX3 1397 aa29.47■■■□□ 2.31
TMED4-203ENST00000457408 DENND4BO75064 1496 aaPredicted RBP29.47■■■□□ 2.31
TMED4-203ENST00000457408 TTC37Q6PGP7 1564 aa29.45■■■□□ 2.31
TMED4-203ENST00000457408 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.3
TMED4-203ENST00000457408 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
TMED4-203ENST00000457408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.44■■■□□ 2.32e-7■■■■□ 26.2
TMED4-203ENST00000457408 CROCC2H7BZ55 1655 aa29.43■■■□□ 2.3
TMED4-203ENST00000457408 CDC42BPBQ9Y5S2 1711 aa29.43■■■□□ 2.3
TMED4-203ENST00000457408 C9orf84Q5VXU9 1444 aa29.43■■■□□ 2.3
TMED4-203ENST00000457408 SCAF1Q9H7N4 1312 aaKnown RBP29.42■■■□□ 2.3
TMED4-203ENST00000457408 ADGBQ8N7X0 1667 aa29.42■■■□□ 2.3
TMED4-203ENST00000457408 ARHGAP5Q13017 1502 aa29.42■■■□□ 2.3
TMED4-203ENST00000457408 UHRF1BP1LA0JNW5 1464 aa29.41■■■□□ 2.3
TMED4-203ENST00000457408 MIER1Q8N108 512 aa29.41■■■□□ 2.3
TMED4-203ENST00000457408 PREX2Q70Z35 1606 aa29.4■■■□□ 2.3
TMED4-203ENST00000457408 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.3
TMED4-203ENST00000457408 ADGRL2O95490 1459 aa29.39■■■□□ 2.29
TMED4-203ENST00000457408 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
TMED4-203ENST00000457408 MBD5Q9P267 1494 aa29.36■■■□□ 2.29
TMED4-203ENST00000457408 HIRIP3Q9BW71 556 aaPredicted RBP29.36■■■□□ 2.29
TMED4-203ENST00000457408 ANKRD50Q9ULJ7 1429 aa29.35■■■□□ 2.29
TMED4-203ENST00000457408 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
TMED4-203ENST00000457408 SHANK2Q9UPX8 1470 aa29.31■■■□□ 2.28
TMED4-203ENST00000457408 SYCP2Q9BX26 1530 aa29.31■■■□□ 2.28
TMED4-203ENST00000457408 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
TMED4-203ENST00000457408 KIF15Q9NS87 1388 aa29.29■■■□□ 2.28
TMED4-203ENST00000457408 MYO5CQ9NQX4 1742 aa29.29■■■□□ 2.28
TMED4-203ENST00000457408 ARHGEF5Q12774 1597 aa29.28■■■□□ 2.28
TMED4-203ENST00000457408 RSPH4AQ5TD94 716 aa29.27■■■□□ 2.28
TMED4-203ENST00000457408 PZPP20742 1482 aa29.26■■■□□ 2.27
TMED4-203ENST00000457408 ANKRD30BQ9BXX2 1392 aa29.25■■■□□ 2.27
TMED4-203ENST00000457408 EFCAB2Q5VUJ9 269 aa29.25■■■□□ 2.27
TMED4-203ENST00000457408 PKD2Q13563 968 aa29.25■■■□□ 2.27
TMED4-203ENST00000457408 NUP155O75694 1391 aa29.24■■■□□ 2.27
TMED4-203ENST00000457408 PLCH2O75038 1416 aa29.24■■■□□ 2.27
TMED4-203ENST00000457408 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
TMED4-203ENST00000457408 YTHDC1Q96MU7 727 aaKnown RBP29.19■■■□□ 2.26
TMED4-203ENST00000457408 WDR7Q9Y4E6 1490 aa29.18■■■□□ 2.26
TMED4-203ENST00000457408 ARHGEF12Q9NZN5 1544 aa29.17■■■□□ 2.26
TMED4-203ENST00000457408 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
TMED4-203ENST00000457408 PLEKHH2Q8IVE3 1493 aa29.15■■■□□ 2.26
TMED4-203ENST00000457408 KIAA1107Q9UPP5 1409 aa29.14■■■□□ 2.26
TMED4-203ENST00000457408 DDX10Q13206 875 aaKnown RBP29.12■■■□□ 2.25
TMED4-203ENST00000457408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.12■■■□□ 2.254e-8■□□□□ 8.8
TMED4-203ENST00000457408 ASXL2Q76L83 1435 aa29.12■■■□□ 2.25
TMED4-203ENST00000457408 RPRD2Q5VT52 1461 aaKnown RBP29.12■■■□□ 2.25
TMED4-203ENST00000457408 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
TMED4-203ENST00000457408 TRAPPC8Q9Y2L5 1435 aa29.08■■■□□ 2.25
TMED4-203ENST00000457408 ABCC1P33527 1531 aa29.03■■■□□ 2.24
TMED4-203ENST00000457408 MYT1LQ9UL68 1186 aa29.03■■■□□ 2.24
TMED4-203ENST00000457408 MAST1Q9Y2H9 1570 aa29.02■■■□□ 2.24
TMED4-203ENST00000457408 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
TMED4-203ENST00000457408 NBPF8Q3BBV2 869 aa29■■■□□ 2.23
TMED4-203ENST00000457408 FANCAO15360 1455 aa29■■■□□ 2.23
TMED4-203ENST00000457408 ZNF326Q5BKZ1 582 aaKnown RBP28.99■■■□□ 2.23
TMED4-203ENST00000457408 CENPBP07199 599 aaPredicted RBP28.99■■■□□ 2.23
TMED4-203ENST00000457408 TEX14Q8IWB6 1497 aa28.98■■■□□ 2.23
TMED4-203ENST00000457408 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
TMED4-203ENST00000457408 KDM5DQ9BY66 1539 aa28.95■■■□□ 2.23
TMED4-203ENST00000457408 ABCA9Q8IUA7 1624 aa28.95■■■□□ 2.23
TMED4-203ENST00000457408 PLXNC1O60486 1568 aa28.94■■■□□ 2.22
TMED4-203ENST00000457408 FAM135AQ9P2D6 1515 aa28.94■■■□□ 2.22
TMED4-203ENST00000457408 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
TMED4-203ENST00000457408 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
TMED4-203ENST00000457408 ARAP3Q8WWN8 1544 aa28.92■■■□□ 2.22
TMED4-203ENST00000457408 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
TMED4-203ENST00000457408 SCAPERQ9BY12 1400 aa28.9■■■□□ 2.22
TMED4-203ENST00000457408 ADGRL1O94910 1474 aa28.9■■■□□ 2.22
TMED4-203ENST00000457408 KDM2AQ9Y2K7 1162 aa28.87■■■□□ 2.21
TMED4-203ENST00000457408 ERBINQ96RT1 1412 aa28.85■■■□□ 2.21
TMED4-203ENST00000457408 UNC13BO14795 1591 aa28.83■■■□□ 2.21
TMED4-203ENST00000457408 CD109Q6YHK3 1445 aa28.83■■■□□ 2.21
TMED4-203ENST00000457408 ZFYVE16Q7Z3T8 1539 aa28.81■■■□□ 2.2
TMED4-203ENST00000457408 RTEL1-TNFRSF6BF6WH68 1400 aa28.8■■■□□ 2.2
TMED4-203ENST00000457408 DCAF11Q8TEB1 546 aa28.8■■■□□ 2.2
TMED4-203ENST00000457408 RGL3Q3MIN7 710 aa28.79■■■□□ 2.2
TMED4-203ENST00000457408 CCDC144AA2RUR9 1427 aa28.77■■■□□ 2.2
TMED4-203ENST00000457408 ATP7AQ04656 1500 aa28.76■■■□□ 2.19
TMED4-203ENST00000457408 WASHC2AQ641Q2 1341 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms