RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 NAIPQ13075 1403 aa18.92■□□□□ 0.62
TOP3B-213ENST00000457179 KIAA0556O60303 1618 aa18.92■□□□□ 0.62
TOP3B-213ENST00000457179 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
TOP3B-213ENST00000457179 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
TOP3B-213ENST00000457179 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
TOP3B-213ENST00000457179 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
TOP3B-213ENST00000457179 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-213ENST00000457179 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
TOP3B-213ENST00000457179 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
TOP3B-213ENST00000457179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.614e-7■■■□□ 14.6
TOP3B-213ENST00000457179 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
TOP3B-213ENST00000457179 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 NUP160Q12769 1436 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.83■□□□□ 0.6
TOP3B-213ENST00000457179 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-213ENST00000457179 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-213ENST00000457179 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
TOP3B-213ENST00000457179 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
TOP3B-213ENST00000457179 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
TOP3B-213ENST00000457179 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
TOP3B-213ENST00000457179 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
TOP3B-213ENST00000457179 ABCC5O15440 1437 aa18.78■□□□□ 0.6
TOP3B-213ENST00000457179 ATP10BO94823 1461 aa18.77■□□□□ 0.6
TOP3B-213ENST00000457179 ANP32CO43423 234 aa18.77■□□□□ 0.59
TOP3B-213ENST00000457179 DAPK1P53355 1430 aa18.76■□□□□ 0.59
TOP3B-213ENST00000457179 NBR1Q14596 966 aa18.76■□□□□ 0.59
TOP3B-213ENST00000457179 PKD2Q13563 968 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 KDM2AQ9Y2K7 1162 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
TOP3B-213ENST00000457179 KDM6BO15054 1643 aa18.73■□□□□ 0.59
TOP3B-213ENST00000457179 KIF14Q15058 1648 aa18.72■□□□□ 0.59
TOP3B-213ENST00000457179 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
TOP3B-213ENST00000457179 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
TOP3B-213ENST00000457179 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 SALL2Q9Y467 1007 aaPredicted RBP18.68■□□□□ 0.58
TOP3B-213ENST00000457179 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 NUP155O75694 1391 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
TOP3B-213ENST00000457179 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
TOP3B-213ENST00000457179 ANKRD30AQ9BXX3 1397 aa18.64■□□□□ 0.58
TOP3B-213ENST00000457179 CHD1O14646 1710 aa18.63■□□□□ 0.57
TOP3B-213ENST00000457179 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
TOP3B-213ENST00000457179 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
TOP3B-213ENST00000457179 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
TOP3B-213ENST00000457179 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
TOP3B-213ENST00000457179 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
TOP3B-213ENST00000457179 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
TOP3B-213ENST00000457179 AKNAQ7Z591 1439 aa18.58■□□□□ 0.57
TOP3B-213ENST00000457179 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
TOP3B-213ENST00000457179 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.56
TOP3B-213ENST00000457179 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
TOP3B-213ENST00000457179 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
TOP3B-213ENST00000457179 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
TOP3B-213ENST00000457179 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 ABCA8O94911 1581 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
TOP3B-213ENST00000457179 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
TOP3B-213ENST00000457179 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 ANKRD30BQ9BXX2 1392 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 PAK3O75914 559 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
TOP3B-213ENST00000457179 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
TOP3B-213ENST00000457179 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
TOP3B-213ENST00000457179 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
TOP3B-213ENST00000457179 KDM5BQ9UGL1 1544 aa18.47■□□□□ 0.55
TOP3B-213ENST00000457179 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
TOP3B-213ENST00000457179 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
TOP3B-213ENST00000457179 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
TOP3B-213ENST00000457179 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 PZPP20742 1482 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
TOP3B-213ENST00000457179 KIF3BO15066 747 aa18.4■□□□□ 0.54
TOP3B-213ENST00000457179 GCC2Q8IWJ2 1684 aa18.39■□□□□ 0.54
TOP3B-213ENST00000457179 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.54
TOP3B-213ENST00000457179 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
TOP3B-213ENST00000457179 ITSN2Q9NZM3 1697 aa18.39■□□□□ 0.53
TOP3B-213ENST00000457179 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 MBD5Q9P267 1494 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 TTC37Q6PGP7 1564 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms