RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 YEATS2Q9ULM3 1422 aa14.21□□□□□ -0.13
PKP4-207ENST00000457109 FRMPD1Q5SYB0 1578 aa14.21□□□□□ -0.14
PKP4-207ENST00000457109 ATP10AO60312 1499 aa14.2□□□□□ -0.14
PKP4-207ENST00000457109 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
PKP4-207ENST00000457109 ARHGEF40Q8TER5 1519 aa14.2□□□□□ -0.14
PKP4-207ENST00000457109 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
PKP4-207ENST00000457109 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
PKP4-207ENST00000457109 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
PKP4-207ENST00000457109 KIF14Q15058 1648 aa14.18□□□□□ -0.14
PKP4-207ENST00000457109 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
PKP4-207ENST00000457109 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
PKP4-207ENST00000457109 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
PKP4-207ENST00000457109 ZMYM4Q5VZL5 1548 aa14.17□□□□□ -0.14
PKP4-207ENST00000457109 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
PKP4-207ENST00000457109 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
PKP4-207ENST00000457109 RICTORQ6R327 1708 aa14.16□□□□□ -0.14
PKP4-207ENST00000457109 HSPA2P54652 639 aa14.16□□□□□ -0.14
PKP4-207ENST00000457109 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
PKP4-207ENST00000457109 CEBPAP49715 358 aaPredicted RBP14.13□□□□□ -0.15
PKP4-207ENST00000457109 CFDP1Q9UEE9 299 aaPredicted RBP14.12□□□□□ -0.15
PKP4-207ENST00000457109 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
PKP4-207ENST00000457109 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
PKP4-207ENST00000457109 MYO5CQ9NQX4 1742 aa14.12□□□□□ -0.15
PKP4-207ENST00000457109 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
PKP4-207ENST00000457109 LMTK3Q96Q04 1460 aa14.1□□□□□ -0.15
PKP4-207ENST00000457109 SPAG9O60271 1321 aaKnown RBP14.1□□□□□ -0.15
PKP4-207ENST00000457109 MTUS2Q5JR59 1369 aa14.09□□□□□ -0.15
PKP4-207ENST00000457109 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.153e-6■■■□□ 19.2
PKP4-207ENST00000457109 FYCO1Q9BQS8 1478 aa14.09□□□□□ -0.15
PKP4-207ENST00000457109 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
PKP4-207ENST00000457109 MLH3Q9UHC1 1453 aa14.07□□□□□ -0.16
PKP4-207ENST00000457109 TRAPPC8Q9Y2L5 1435 aa14.07□□□□□ -0.16
PKP4-207ENST00000457109 ARHGEF12Q9NZN5 1544 aa14.04□□□□□ -0.16
PKP4-207ENST00000457109 CERKQ8TCT0 537 aa14.03□□□□□ -0.16
PKP4-207ENST00000457109 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
PKP4-207ENST00000457109 KDM5CP41229 1560 aa14.03□□□□□ -0.16
PKP4-207ENST00000457109 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
PKP4-207ENST00000457109 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
PKP4-207ENST00000457109 GGT6Q6P531 493 aa14.01□□□□□ -0.17
PKP4-207ENST00000457109 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
PKP4-207ENST00000457109 FER1L4A9Z1Z3 1794 aa14□□□□□ -0.17
PKP4-207ENST00000457109 ABCC1P33527 1531 aa14□□□□□ -0.17
PKP4-207ENST00000457109 KIAA1107Q9UPP5 1409 aa13.99□□□□□ -0.17
PKP4-207ENST00000457109 PREX2Q70Z35 1606 aa13.99□□□□□ -0.17
PKP4-207ENST00000457109 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
PKP4-207ENST00000457109 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
PKP4-207ENST00000457109 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
PKP4-207ENST00000457109 AGLP35573 1532 aa13.98□□□□□ -0.17
PKP4-207ENST00000457109 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
PKP4-207ENST00000457109 REREQ9P2R6 1566 aa13.96□□□□□ -0.17
PKP4-207ENST00000457109 CEP162Q5TB80 1403 aa13.96□□□□□ -0.18
PKP4-207ENST00000457109 ZMYM3Q14202 1370 aa13.96□□□□□ -0.18
PKP4-207ENST00000457109 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
PKP4-207ENST00000457109 SIGLEC1Q9BZZ2 1709 aa13.95□□□□□ -0.18
PKP4-207ENST00000457109 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
PKP4-207ENST00000457109 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
PKP4-207ENST00000457109 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
PKP4-207ENST00000457109 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
PKP4-207ENST00000457109 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
PKP4-207ENST00000457109 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
PKP4-207ENST00000457109 A2MP01023 1474 aa13.93□□□□□ -0.18
PKP4-207ENST00000457109 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
PKP4-207ENST00000457109 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
PKP4-207ENST00000457109 APLP2Q06481 763 aa13.92□□□□□ -0.18
PKP4-207ENST00000457109 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
PKP4-207ENST00000457109 PREX1Q8TCU6 1659 aa13.91□□□□□ -0.18
PKP4-207ENST00000457109 KIF3BO15066 747 aa13.9□□□□□ -0.18
PKP4-207ENST00000457109 ATP7AQ04656 1500 aa13.9□□□□□ -0.19
PKP4-207ENST00000457109 NPATQ14207 1427 aa13.9□□□□□ -0.19
PKP4-207ENST00000457109 KIDINS220Q9ULH0 1771 aa13.89□□□□□ -0.19
PKP4-207ENST00000457109 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
PKP4-207ENST00000457109 PTPRTO14522 1441 aa13.89□□□□□ -0.19
PKP4-207ENST00000457109 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
PKP4-207ENST00000457109 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
PKP4-207ENST00000457109 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
PKP4-207ENST00000457109 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
PKP4-207ENST00000457109 PKD2Q13563 968 aa13.87□□□□□ -0.19
PKP4-207ENST00000457109 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
PKP4-207ENST00000457109 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
PKP4-207ENST00000457109 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
PKP4-207ENST00000457109 C3P01024 1663 aa13.84□□□□□ -0.19
PKP4-207ENST00000457109 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
PKP4-207ENST00000457109 CCDC141Q6ZP82 1450 aa13.82□□□□□ -0.2
PKP4-207ENST00000457109 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
PKP4-207ENST00000457109 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
PKP4-207ENST00000457109 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
PKP4-207ENST00000457109 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
PKP4-207ENST00000457109 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
PKP4-207ENST00000457109 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
PKP4-207ENST00000457109 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
PKP4-207ENST00000457109 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
PKP4-207ENST00000457109 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
PKP4-207ENST00000457109 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
PKP4-207ENST00000457109 ANKLE2Q86XL3 938 aa13.78□□□□□ -0.2
PKP4-207ENST00000457109 TNRQ92752 1358 aa13.78□□□□□ -0.2
PKP4-207ENST00000457109 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
PKP4-207ENST00000457109 PLXNC1O60486 1568 aa13.78□□□□□ -0.2
PKP4-207ENST00000457109 MROH2AA6NES4 1674 aa13.78□□□□□ -0.2
PKP4-207ENST00000457109 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
PKP4-207ENST00000457109 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms