RNA–Protein interactions for RNA: ENST00000457005.5

SATB1-210, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-210ENST00000457005 C3P01024 1663 aa12.1□□□□□ -0.47
SATB1-210ENST00000457005 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
SATB1-210ENST00000457005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
SATB1-210ENST00000457005 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
SATB1-210ENST00000457005 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
SATB1-210ENST00000457005 SETD1BQ9UPS6 1966 aaKnown RBP12.08□□□□□ -0.48
SATB1-210ENST00000457005 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
SATB1-210ENST00000457005 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
SATB1-210ENST00000457005 MLECQ14165 292 aa12.04□□□□□ -0.48
SATB1-210ENST00000457005 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
SATB1-210ENST00000457005 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
SATB1-210ENST00000457005 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.48
SATB1-210ENST00000457005 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
SATB1-210ENST00000457005 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.49
SATB1-210ENST00000457005 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
SATB1-210ENST00000457005 PTPRTO14522 1441 aa12.01□□□□□ -0.49
SATB1-210ENST00000457005 MED1Q15648 1581 aaPredicted RBP12□□□□□ -0.49
SATB1-210ENST00000457005 ABCA6Q8N139 1617 aa12□□□□□ -0.49
SATB1-210ENST00000457005 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
SATB1-210ENST00000457005 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
SATB1-210ENST00000457005 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
SATB1-210ENST00000457005 ATP10AO60312 1499 aa11.98□□□□□ -0.49
SATB1-210ENST00000457005 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
SATB1-210ENST00000457005 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
SATB1-210ENST00000457005 KDM5CP41229 1560 aa11.96□□□□□ -0.49
SATB1-210ENST00000457005 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
SATB1-210ENST00000457005 CLIP1P30622 1438 aa11.95□□□□□ -0.5
SATB1-210ENST00000457005 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
SATB1-210ENST00000457005 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
SATB1-210ENST00000457005 KIF14Q15058 1648 aa11.95□□□□□ -0.5
SATB1-210ENST00000457005 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
SATB1-210ENST00000457005 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
SATB1-210ENST00000457005 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
SATB1-210ENST00000457005 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
SATB1-210ENST00000457005 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
SATB1-210ENST00000457005 ZNF142P52746 1687 aaPredicted RBP11.94□□□□□ -0.5
SATB1-210ENST00000457005 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
SATB1-210ENST00000457005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
SATB1-210ENST00000457005 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
SATB1-210ENST00000457005 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
SATB1-210ENST00000457005 CCDC18Q5T9S5 1454 aa11.93□□□□□ -0.5
SATB1-210ENST00000457005 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
SATB1-210ENST00000457005 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
SATB1-210ENST00000457005 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
SATB1-210ENST00000457005 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
SATB1-210ENST00000457005 MYO3AQ8NEV4 1616 aa11.9□□□□□ -0.5
SATB1-210ENST00000457005 PLCH2O75038 1416 aa11.9□□□□□ -0.5
SATB1-210ENST00000457005 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.51
SATB1-210ENST00000457005 CEP162Q5TB80 1403 aa11.89□□□□□ -0.51
SATB1-210ENST00000457005 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
SATB1-210ENST00000457005 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
SATB1-210ENST00000457005 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
SATB1-210ENST00000457005 AGLP35573 1532 aa11.86□□□□□ -0.51
SATB1-210ENST00000457005 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
SATB1-210ENST00000457005 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
SATB1-210ENST00000457005 POLR1AO95602 1720 aaPredicted RBP11.86□□□□□ -0.51
SATB1-210ENST00000457005 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
SATB1-210ENST00000457005 ATP1B4Q9UN42 357 aaPredicted RBP11.85□□□□□ -0.51
SATB1-210ENST00000457005 TRAPPC8Q9Y2L5 1435 aa11.85□□□□□ -0.51
SATB1-210ENST00000457005 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
SATB1-210ENST00000457005 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
SATB1-210ENST00000457005 CEP170BQ9Y4F5 1589 aaPredicted RBP11.83□□□□□ -0.52
SATB1-210ENST00000457005 ABCC1P33527 1531 aa11.82□□□□□ -0.52
SATB1-210ENST00000457005 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
SATB1-210ENST00000457005 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
SATB1-210ENST00000457005 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
SATB1-210ENST00000457005 NEURL4Q96JN8 1562 aa11.81□□□□□ -0.52
SATB1-210ENST00000457005 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
SATB1-210ENST00000457005 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
SATB1-210ENST00000457005 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
SATB1-210ENST00000457005 HSPA1LP34931 641 aa11.8□□□□□ -0.52
SATB1-210ENST00000457005 STRCP1A6NGW2 1772 aa11.79□□□□□ -0.52
SATB1-210ENST00000457005 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
SATB1-210ENST00000457005 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
SATB1-210ENST00000457005 NPATQ14207 1427 aa11.77□□□□□ -0.52
SATB1-210ENST00000457005 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
SATB1-210ENST00000457005 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
SATB1-210ENST00000457005 EFCAB2Q5VUJ9 269 aa11.76□□□□□ -0.53
SATB1-210ENST00000457005 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
SATB1-210ENST00000457005 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 MAP3K1Q13233 1512 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
SATB1-210ENST00000457005 INO80Q9ULG1 1556 aaPredicted RBP11.73□□□□□ -0.53
SATB1-210ENST00000457005 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
SATB1-210ENST00000457005 PTPRKQ15262 1439 aa11.72□□□□□ -0.53
SATB1-210ENST00000457005 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.53
SATB1-210ENST00000457005 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
SATB1-210ENST00000457005 CPS1P31327 1500 aa11.7□□□□□ -0.54
SATB1-210ENST00000457005 ZMYM3Q14202 1370 aa11.7□□□□□ -0.54
SATB1-210ENST00000457005 PIP4K2BP78356 416 aa11.7□□□□□ -0.54
SATB1-210ENST00000457005 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
SATB1-210ENST00000457005 SYCP2Q9BX26 1530 aa11.69□□□□□ -0.54
SATB1-210ENST00000457005 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
SATB1-210ENST00000457005 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
SATB1-210ENST00000457005 CCNB3Q8WWL7 1395 aa11.68□□□□□ -0.54
SATB1-210ENST00000457005 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms