RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 LMTK3Q96Q04 1460 aa35.41■■■■□ 3.26
TMEM56-203ENST00000456991 ARHGAP35Q9NRY4 1499 aa35.4■■■■□ 3.26
TMEM56-203ENST00000456991 MLECQ14165 292 aa35.39■■■■□ 3.26
TMEM56-203ENST00000456991 CHIC1Q5VXU3 224 aa35.39■■■■□ 3.26
TMEM56-203ENST00000456991 PLPPR3Q6T4P5 718 aa35.39■■■■□ 3.26
TMEM56-203ENST00000456991 RIMS1Q86UR5 1692 aaKnown RBP35.36■■■■□ 3.25
TMEM56-203ENST00000456991 HECW1Q76N89 1606 aa35.35■■■■□ 3.25
TMEM56-203ENST00000456991 HSPA2P54652 639 aa35.3■■■■□ 3.24
TMEM56-203ENST00000456991 ATP10AO60312 1499 aa35.29■■■■□ 3.24
TMEM56-203ENST00000456991 TROQ12816 1431 aaPredicted RBP35.29■■■■□ 3.24
TMEM56-203ENST00000456991 CLIP1P30622 1438 aa35.25■■■■□ 3.23
TMEM56-203ENST00000456991 C9orf84Q5VXU9 1444 aa35.23■■■■□ 3.23
TMEM56-203ENST00000456991 AFAP1Q8N556 730 aa35.23■■■■□ 3.23
TMEM56-203ENST00000456991 SIGLEC1Q9BZZ2 1709 aa35.23■■■■□ 3.23
TMEM56-203ENST00000456991 ZNF518AQ6AHZ1 1483 aa35.2■■■■□ 3.23
TMEM56-203ENST00000456991 KIF14Q15058 1648 aa35.2■■■■□ 3.23
TMEM56-203ENST00000456991 MYO5CQ9NQX4 1742 aa35.19■■■■□ 3.22
TMEM56-203ENST00000456991 MYT1LQ9UL68 1186 aa35.19■■■■□ 3.22
TMEM56-203ENST00000456991 ARHGAP5Q13017 1502 aa35.18■■■■□ 3.22
TMEM56-203ENST00000456991 ARHGEF12Q9NZN5 1544 aa35.15■■■■□ 3.22
TMEM56-203ENST00000456991 CEBPAP49715 358 aaPredicted RBP35.1■■■■□ 3.21
TMEM56-203ENST00000456991 FER1L4A9Z1Z3 1794 aa35.09■■■■□ 3.21
TMEM56-203ENST00000456991 CASKIN1Q8WXD9 1431 aa35.07■■■■□ 3.21
TMEM56-203ENST00000456991 KDM5CP41229 1560 aa35.06■■■■□ 3.2
TMEM56-203ENST00000456991 CCDC18Q5T9S5 1454 aa35.03■■■■□ 3.2
TMEM56-203ENST00000456991 MLH3Q9UHC1 1453 aa35.01■■■■□ 3.19
TMEM56-203ENST00000456991 CERKQ8TCT0 537 aa35■■■■□ 3.19
TMEM56-203ENST00000456991 TRAPPC8Q9Y2L5 1435 aa34.98■■■■□ 3.19
TMEM56-203ENST00000456991 LRRIQ1Q96JM4 1722 aa34.97■■■■□ 3.19
TMEM56-203ENST00000456991 ESF1Q9H501 851 aaKnown RBP34.95■■■■□ 3.19
TMEM56-203ENST00000456991 DMRT2Q9Y5R5 561 aa34.94■■■■□ 3.18
TMEM56-203ENST00000456991 DIP2CQ9Y2E4 1556 aa34.94■■■■□ 3.18
TMEM56-203ENST00000456991 REREQ9P2R6 1566 aa34.93■■■■□ 3.18
TMEM56-203ENST00000456991 CDC42BPBQ9Y5S2 1711 aa34.92■■■■□ 3.18
TMEM56-203ENST00000456991 ABCC1P33527 1531 aa34.91■■■■□ 3.18
TMEM56-203ENST00000456991 UHRF1BP1Q6BDS2 1440 aa34.9■■■■□ 3.18
TMEM56-203ENST00000456991 PREX2Q70Z35 1606 aa34.89■■■■□ 3.18
TMEM56-203ENST00000456991 ZNF777Q9ULD5 760 aaPredicted RBP34.88■■■■□ 3.17
TMEM56-203ENST00000456991 PREX1Q8TCU6 1659 aa34.88■■■■□ 3.17
TMEM56-203ENST00000456991 AGLP35573 1532 aa34.87■■■■□ 3.17
TMEM56-203ENST00000456991 FYCO1Q9BQS8 1478 aa34.87■■■■□ 3.17
TMEM56-203ENST00000456991 ABCA6Q8N139 1617 aa34.84■■■■□ 3.17
TMEM56-203ENST00000456991 SPAG9O60271 1321 aaKnown RBP34.78■■■■□ 3.16
TMEM56-203ENST00000456991 ITSN2Q9NZM3 1697 aa34.77■■■■□ 3.16
TMEM56-203ENST00000456991 HNRNPMP52272 730 aaKnown RBP eCLIP34.77■■■■□ 3.16
TMEM56-203ENST00000456991 CNTLNQ9NXG0 1405 aa34.77■■■■□ 3.16
TMEM56-203ENST00000456991 SETD1BQ9UPS6 1966 aaKnown RBP34.76■■■■□ 3.16
TMEM56-203ENST00000456991 GPATCH8Q9UKJ3 1502 aaKnown RBP34.76■■■■□ 3.16
TMEM56-203ENST00000456991 CFDP1Q9UEE9 299 aaPredicted RBP34.74■■■■□ 3.15
TMEM56-203ENST00000456991 CDC42BPAQ5VT25 1732 aa34.73■■■■□ 3.15
TMEM56-203ENST00000456991 KIDINS220Q9ULH0 1771 aa34.72■■■■□ 3.15
TMEM56-203ENST00000456991 SAMD9LQ8IVG5 1584 aa34.7■■■■□ 3.15
TMEM56-203ENST00000456991 KIAA1107Q9UPP5 1409 aa34.69■■■■□ 3.14
TMEM56-203ENST00000456991 C3P01024 1663 aa34.69■■■■□ 3.14
TMEM56-203ENST00000456991 STRCQ7RTU9 1775 aa34.68■■■■□ 3.14
TMEM56-203ENST00000456991 CCNB3Q8WWL7 1395 aa34.68■■■■□ 3.14
TMEM56-203ENST00000456991 PTPRTO14522 1441 aa34.67■■■■□ 3.14
TMEM56-203ENST00000456991 SYCP2Q9BX26 1530 aa34.66■■■■□ 3.14
TMEM56-203ENST00000456991 PLEKHH2Q8IVE3 1493 aa34.66■■■■□ 3.14
TMEM56-203ENST00000456991 MTUS2Q5JR59 1369 aa34.64■■■■□ 3.14
TMEM56-203ENST00000456991 ZMYM3Q14202 1370 aa34.63■■■■□ 3.13
TMEM56-203ENST00000456991 NPATQ14207 1427 aa34.6■■■■□ 3.13
TMEM56-203ENST00000456991 ATP7AQ04656 1500 aa34.55■■■■□ 3.12
TMEM56-203ENST00000456991 A2MP01023 1474 aa34.55■■■■□ 3.12
TMEM56-203ENST00000456991 NCOA1Q15788 1441 aa34.55■■■■□ 3.12
TMEM56-203ENST00000456991 GGT6Q6P531 493 aa34.53■■■■□ 3.12
TMEM56-203ENST00000456991 PPP6R1Q9UPN7 881 aa34.51■■■■□ 3.12
TMEM56-203ENST00000456991 ZNF644Q9H582 1327 aaPredicted RBP34.51■■■■□ 3.11
TMEM56-203ENST00000456991 MROH2AA6NES4 1674 aa34.47■■■■□ 3.11
TMEM56-203ENST00000456991 SUPT6HQ7KZ85 1726 aaKnown RBP34.47■■■■□ 3.11
TMEM56-203ENST00000456991 PLXNC1O60486 1568 aa34.46■■■■□ 3.11
TMEM56-203ENST00000456991 INO80Q9ULG1 1556 aaPredicted RBP34.46■■■■□ 3.11
TMEM56-203ENST00000456991 NCKAP5LQ9HCH0 1330 aa34.43■■■■□ 3.1
TMEM56-203ENST00000456991 CAMSAP1Q5T5Y3 1602 aa34.43■■■■□ 3.1
TMEM56-203ENST00000456991 MBD5Q9P267 1494 aa34.41■■■■□ 3.1
TMEM56-203ENST00000456991 PTPRKQ15262 1439 aa34.4■■■■□ 3.1
TMEM56-203ENST00000456991 LTBP4Q8N2S1 1624 aa34.4■■■■□ 3.1
TMEM56-203ENST00000456991 CEP162Q5TB80 1403 aa34.39■■■■□ 3.1
TMEM56-203ENST00000456991 PKD2Q13563 968 aa34.39■■■■□ 3.1
TMEM56-203ENST00000456991 EHBP1L1Q8N3D4 1523 aa34.39■■■■□ 3.1
TMEM56-203ENST00000456991 RTEL1-TNFRSF6BF6WH68 1400 aa34.38■■■■□ 3.09
TMEM56-203ENST00000456991 TIAM1Q13009 1591 aa34.37■■■■□ 3.09
TMEM56-203ENST00000456991 CLTCQ00610 1675 aaKnown RBP34.36■■■■□ 3.09
TMEM56-203ENST00000456991 IQSEC2Q5JU85 1478 aa34.35■■■■□ 3.09
TMEM56-203ENST00000456991 DHX29Q7Z478 1369 aaKnown RBP34.35■■■■□ 3.09
TMEM56-203ENST00000456991 DISP3Q9P2K9 1392 aa34.34■■■■□ 3.09
TMEM56-203ENST00000456991 RSPH4AQ5TD94 716 aa34.32■■■■□ 3.08
TMEM56-203ENST00000456991 PLA2R1Q13018 1463 aa34.31■■■■□ 3.08
TMEM56-203ENST00000456991 ADGBQ8N7X0 1667 aa34.3■■■■□ 3.08
TMEM56-203ENST00000456991 ZNF335Q9H4Z2 1342 aaPredicted RBP34.29■■■■□ 3.08
TMEM56-203ENST00000456991 KIF3BO15066 747 aa34.28■■■■□ 3.08
TMEM56-203ENST00000456991 CEP170BQ9Y4F5 1589 aaPredicted RBP34.26■■■■□ 3.07
TMEM56-203ENST00000456991 MYO3AQ8NEV4 1616 aa34.25■■■■□ 3.07
TMEM56-203ENST00000456991 TCOF1Q13428 1488 aaKnown RBP34.24■■■■□ 3.07
TMEM56-203ENST00000456991 NCOA2Q15596 1464 aa34.23■■■■□ 3.07
TMEM56-203ENST00000456991 CCDC141Q6ZP82 1450 aa34.22■■■■□ 3.07
TMEM56-203ENST00000456991 ZNF142P52746 1687 aaPredicted RBP34.21■■■■□ 3.07
TMEM56-203ENST00000456991 TSPY4P0CV99 314 aa34.19■■■■□ 3.06
TMEM56-203ENST00000456991 TSPY10P0CW01 314 aa34.19■■■■□ 3.06
TMEM56-203ENST00000456991 FBXO31Q5XUX0 539 aaPredicted RBP34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms