RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 KDM6BO15054 1643 aa10.15□□□□□ -0.78
FN1-213ENST00000456923 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
FN1-213ENST00000456923 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
FN1-213ENST00000456923 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
FN1-213ENST00000456923 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
FN1-213ENST00000456923 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
FN1-213ENST00000456923 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
FN1-213ENST00000456923 SUPT6HQ7KZ85 1726 aaKnown RBP10.13□□□□□ -0.79
FN1-213ENST00000456923 CLIP1P30622 1438 aa10.12□□□□□ -0.79
FN1-213ENST00000456923 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
FN1-213ENST00000456923 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
FN1-213ENST00000456923 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
FN1-213ENST00000456923 ABCC1P33527 1531 aa10.11□□□□□ -0.79
FN1-213ENST00000456923 CROCC2H7BZ55 1655 aa10.11□□□□□ -0.79
FN1-213ENST00000456923 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
FN1-213ENST00000456923 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
FN1-213ENST00000456923 PLCH2O75038 1416 aa10.09□□□□□ -0.79
FN1-213ENST00000456923 SALL2Q9Y467 1007 aaPredicted RBP10.08□□□□□ -0.8
FN1-213ENST00000456923 CDK13Q14004 1512 aaKnown RBP10.08□□□□□ -0.8
FN1-213ENST00000456923 MROH2AA6NES4 1674 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 ADAMTSL3P82987 1691 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 PLEKHH2Q8IVE3 1493 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 AGLP35573 1532 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 ADGBQ8N7X0 1667 aa10.07□□□□□ -0.8
FN1-213ENST00000456923 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
FN1-213ENST00000456923 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
FN1-213ENST00000456923 TSPOAP1O95153 1857 aa10.06□□□□□ -0.8
FN1-213ENST00000456923 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
FN1-213ENST00000456923 EIF2AK4Q9P2K8 1649 aaKnown RBP10.05□□□□□ -0.8
FN1-213ENST00000456923 HECW2Q9P2P5 1572 aa10.05□□□□□ -0.8
FN1-213ENST00000456923 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
FN1-213ENST00000456923 CD109Q6YHK3 1445 aa10.04□□□□□ -0.8
FN1-213ENST00000456923 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
FN1-213ENST00000456923 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
FN1-213ENST00000456923 POGZQ7Z3K3 1410 aa10.02□□□□□ -0.81
FN1-213ENST00000456923 SHANK2Q9UPX8 1470 aa10.02□□□□□ -0.81
FN1-213ENST00000456923 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
FN1-213ENST00000456923 LRRC9Q6ZRR7 1453 aa10.01□□□□□ -0.81
FN1-213ENST00000456923 A0A0U1RQG5 324 aaPredicted RBP10.01□□□□□ -0.81
FN1-213ENST00000456923 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
FN1-213ENST00000456923 MIA2Q96PC5 1412 aa10.01□□□□□ -0.81
FN1-213ENST00000456923 RNF17Q9BXT8 1623 aaKnown RBP10□□□□□ -0.81
FN1-213ENST00000456923 GPATCH8Q9UKJ3 1502 aaKnown RBP10□□□□□ -0.81
FN1-213ENST00000456923 DIP2CQ9Y2E4 1556 aa10□□□□□ -0.81
FN1-213ENST00000456923 ZC3H13Q5T200 1668 aaKnown RBP9.99□□□□□ -0.81
FN1-213ENST00000456923 SIGLEC1Q9BZZ2 1709 aa9.99□□□□□ -0.81
FN1-213ENST00000456923 COL17A1Q9UMD9 1497 aaPredicted RBP9.99□□□□□ -0.81
FN1-213ENST00000456923 RTEL1-TNFRSF6BF6WH68 1400 aa9.99□□□□□ -0.81
FN1-213ENST00000456923 FANCAO15360 1455 aa9.99□□□□□ -0.81
FN1-213ENST00000456923 DEPDC5O75140 1603 aa9.99□□□□□ -0.81
FN1-213ENST00000456923 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
FN1-213ENST00000456923 ABCA6Q8N139 1617 aa9.98□□□□□ -0.81
FN1-213ENST00000456923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.98□□□□□ -0.81
FN1-213ENST00000456923 ZFYVE16Q7Z3T8 1539 aa9.98□□□□□ -0.81
FN1-213ENST00000456923 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
FN1-213ENST00000456923 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
FN1-213ENST00000456923 DNMT1P26358 1616 aaKnown RBP9.97□□□□□ -0.81
FN1-213ENST00000456923 DENND4BO75064 1496 aaPredicted RBP9.96□□□□□ -0.82
FN1-213ENST00000456923 MBD5Q9P267 1494 aa9.95□□□□□ -0.82
FN1-213ENST00000456923 KDM5DQ9BY66 1539 aa9.95□□□□□ -0.82
FN1-213ENST00000456923 KDM5AP29375 1690 aaKnown RBP9.94□□□□□ -0.82
FN1-213ENST00000456923 CDK11AQ9UQ88 783 aaPredicted RBP9.93□□□□□ -0.82
FN1-213ENST00000456923 ADGRL2O95490 1459 aa9.93□□□□□ -0.82
FN1-213ENST00000456923 NCOA2Q15596 1464 aa9.93□□□□□ -0.82
FN1-213ENST00000456923 ZNF142P52746 1687 aaPredicted RBP9.93□□□□□ -0.82
FN1-213ENST00000456923 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
FN1-213ENST00000456923 ADGRL1O94910 1474 aa9.92□□□□□ -0.82
FN1-213ENST00000456923 FAM69CQ0P6D2 419 aa9.92□□□□□ -0.82
FN1-213ENST00000456923 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
FN1-213ENST00000456923 ATP7AQ04656 1500 aa9.91□□□□□ -0.82
FN1-213ENST00000456923 PTPN23Q9H3S7 1636 aa9.91□□□□□ -0.82
FN1-213ENST00000456923 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
FN1-213ENST00000456923 C9orf84Q5VXU9 1444 aa9.9□□□□□ -0.82
FN1-213ENST00000456923 PLEKHD1A6NEE1 506 aa9.9□□□□□ -0.82
FN1-213ENST00000456923 FER1L4A9Z1Z3 1794 aa9.9□□□□□ -0.82
FN1-213ENST00000456923 UBE2Q2Q8WVN8 375 aa9.89□□□□□ -0.83
FN1-213ENST00000456923 MYOM3Q5VTT5 1437 aa9.89□□□□□ -0.83
FN1-213ENST00000456923 ATP10AO60312 1499 aa9.89□□□□□ -0.83
FN1-213ENST00000456923 CAMSAP2Q08AD1 1489 aa9.89□□□□□ -0.83
FN1-213ENST00000456923 SYCP2Q9BX26 1530 aa9.88□□□□□ -0.83
FN1-213ENST00000456923 BCANQ96GW7 911 aa9.88□□□□□ -0.83
FN1-213ENST00000456923 LMTK2Q8IWU2 1503 aa9.88□□□□□ -0.83
FN1-213ENST00000456923 MROH1Q8NDA8 1641 aa9.87□□□□□ -0.83
FN1-213ENST00000456923 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
FN1-213ENST00000456923 UNC13BO14795 1591 aa9.87□□□□□ -0.83
FN1-213ENST00000456923 GCC2Q8IWJ2 1684 aa9.87□□□□□ -0.83
FN1-213ENST00000456923 CCDC141Q6ZP82 1450 aa9.87□□□□□ -0.83
FN1-213ENST00000456923 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
FN1-213ENST00000456923 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
FN1-213ENST00000456923 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
FN1-213ENST00000456923 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
FN1-213ENST00000456923 DUOX2Q9NRD8 1548 aa9.83□□□□□ -0.84
FN1-213ENST00000456923 C3P01024 1663 aa9.83□□□□□ -0.84
FN1-213ENST00000456923 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
FN1-213ENST00000456923 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
FN1-213ENST00000456923 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
FN1-213ENST00000456923 SCAPERQ9BY12 1400 aa9.82□□□□□ -0.84
FN1-213ENST00000456923 EFCAB2Q5VUJ9 269 aa9.81□□□□□ -0.84
FN1-213ENST00000456923 CNTLNQ9NXG0 1405 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms