RNA–Protein interactions for RNA: ENST00000456812.6

GAS5-228, Transcript of growth arrest specific 5, humanhuman

TSL 3

Gene GAS5, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-228ENST00000456812 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
GAS5-228ENST00000456812 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.621e-27■■□□□ 12.8
GAS5-228ENST00000456812 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
GAS5-228ENST00000456812 GLI2P10070 1586 aa11.2□□□□□ -0.62
GAS5-228ENST00000456812 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
GAS5-228ENST00000456812 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
GAS5-228ENST00000456812 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
GAS5-228ENST00000456812 FYCO1Q9BQS8 1478 aa11.16□□□□□ -0.62
GAS5-228ENST00000456812 CASKIN1Q8WXD9 1431 aa11.16□□□□□ -0.62
GAS5-228ENST00000456812 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
GAS5-228ENST00000456812 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
GAS5-228ENST00000456812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.633e-8■□□□□ 10.1
GAS5-228ENST00000456812 KDM6BO15054 1643 aa11.13□□□□□ -0.63
GAS5-228ENST00000456812 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
GAS5-228ENST00000456812 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
GAS5-228ENST00000456812 CCDC18Q5T9S5 1454 aa11.09□□□□□ -0.63
GAS5-228ENST00000456812 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
GAS5-228ENST00000456812 FRMPD1Q5SYB0 1578 aa11.08□□□□□ -0.64
GAS5-228ENST00000456812 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
GAS5-228ENST00000456812 TROQ12816 1431 aaPredicted RBP11.08□□□□□ -0.64
GAS5-228ENST00000456812 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
GAS5-228ENST00000456812 POLA2Q14181 598 aa11.07□□□□□ -0.64
GAS5-228ENST00000456812 CDC42BPAQ5VT25 1732 aa11.06□□□□□ -0.64
GAS5-228ENST00000456812 ABCB7O75027 752 aa11.06□□□□□ -0.64
GAS5-228ENST00000456812 DSG3P32926 999 aa11.06□□□□□ -0.64
GAS5-228ENST00000456812 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
GAS5-228ENST00000456812 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
GAS5-228ENST00000456812 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
GAS5-228ENST00000456812 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
GAS5-228ENST00000456812 FANCAO15360 1455 aa11.02□□□□□ -0.65
GAS5-228ENST00000456812 PLEKHD1A6NEE1 506 aa11.02□□□□□ -0.65
GAS5-228ENST00000456812 RICTORQ6R327 1708 aa11.01□□□□□ -0.65
GAS5-228ENST00000456812 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
GAS5-228ENST00000456812 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
GAS5-228ENST00000456812 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
GAS5-228ENST00000456812 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
GAS5-228ENST00000456812 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
GAS5-228ENST00000456812 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
GAS5-228ENST00000456812 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 ADGRL1O94910 1474 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 NEO1Q92859 1461 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 ABCC1P33527 1531 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
GAS5-228ENST00000456812 SUPT6HQ7KZ85 1726 aaKnown RBP10.98□□□□□ -0.65
GAS5-228ENST00000456812 PLCH2O75038 1416 aa10.97□□□□□ -0.65
GAS5-228ENST00000456812 NCOA2Q15596 1464 aa10.97□□□□□ -0.65
GAS5-228ENST00000456812 SYCP2Q9BX26 1530 aa10.97□□□□□ -0.65
GAS5-228ENST00000456812 GPATCH8Q9UKJ3 1502 aaKnown RBP10.97□□□□□ -0.65
GAS5-228ENST00000456812 ARAP3Q8WWN8 1544 aa10.96□□□□□ -0.65
GAS5-228ENST00000456812 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
GAS5-228ENST00000456812 RAPGEF3O95398 923 aa10.96□□□□□ -0.65
GAS5-228ENST00000456812 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
GAS5-228ENST00000456812 POGZQ7Z3K3 1410 aa10.94□□□□□ -0.66
GAS5-228ENST00000456812 YEATS2Q9ULM3 1422 aa10.93□□□□□ -0.66
GAS5-228ENST00000456812 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
GAS5-228ENST00000456812 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
GAS5-228ENST00000456812 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
GAS5-228ENST00000456812 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
GAS5-228ENST00000456812 ABCA6Q8N139 1617 aa10.92□□□□□ -0.66
GAS5-228ENST00000456812 DENND4BO75064 1496 aaPredicted RBP10.92□□□□□ -0.66
GAS5-228ENST00000456812 KDM5CP41229 1560 aa10.91□□□□□ -0.66
GAS5-228ENST00000456812 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
GAS5-228ENST00000456812 MAP3K1Q13233 1512 aa10.91□□□□□ -0.66
GAS5-228ENST00000456812 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
GAS5-228ENST00000456812 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.66
GAS5-228ENST00000456812 CAMSAP2Q08AD1 1489 aa10.9□□□□□ -0.66
GAS5-228ENST00000456812 ZNF777Q9ULD5 760 aaPredicted RBP10.9□□□□□ -0.66
GAS5-228ENST00000456812 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
GAS5-228ENST00000456812 PHLDB1Q86UU1 1377 aa10.9□□□□□ -0.67
GAS5-228ENST00000456812 ZFYVE16Q7Z3T8 1539 aa10.89□□□□□ -0.67
GAS5-228ENST00000456812 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
GAS5-228ENST00000456812 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
GAS5-228ENST00000456812 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
GAS5-228ENST00000456812 AFAP1Q8N556 730 aa10.86□□□□□ -0.67
GAS5-228ENST00000456812 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
GAS5-228ENST00000456812 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
GAS5-228ENST00000456812 EFCAB2Q5VUJ9 269 aa10.85□□□□□ -0.67
GAS5-228ENST00000456812 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 MADDQ8WXG6 1647 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 PTPN23Q9H3S7 1636 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
GAS5-228ENST00000456812 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 CROCC2H7BZ55 1655 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 ADGBQ8N7X0 1667 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 ATP7AQ04656 1500 aa10.84□□□□□ -0.67
GAS5-228ENST00000456812 HNRNPMP52272 730 aaKnown RBP eCLIP10.83□□□□□ -0.68
GAS5-228ENST00000456812 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
GAS5-228ENST00000456812 BCORL1Q5H9F3 1711 aa10.83□□□□□ -0.68
GAS5-228ENST00000456812 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
GAS5-228ENST00000456812 RIMS1Q86UR5 1692 aaKnown RBP10.81□□□□□ -0.68
GAS5-228ENST00000456812 FGD6Q6ZV73 1430 aa10.81□□□□□ -0.68
GAS5-228ENST00000456812 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
GAS5-228ENST00000456812 ARHGEF5Q12774 1597 aa10.8□□□□□ -0.68
GAS5-228ENST00000456812 CCDC141Q6ZP82 1450 aa10.8□□□□□ -0.68
GAS5-228ENST00000456812 PLXNC1O60486 1568 aa10.79□□□□□ -0.68
GAS5-228ENST00000456812 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
GAS5-228ENST00000456812 MLH3Q9UHC1 1453 aa10.79□□□□□ -0.68
GAS5-228ENST00000456812 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
GAS5-228ENST00000456812 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms