RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-218ENST00000456174 RBM19Q9Y4C8 960 aaKnown RBP10.87□□□□□ -0.67
HDAC9-218ENST00000456174 CLASP1Q7Z460 1538 aa10.87□□□□□ -0.67
HDAC9-218ENST00000456174 PTPRGP23470 1445 aa10.86□□□□□ -0.67
HDAC9-218ENST00000456174 ZBTB22O15209 634 aa10.85□□□□□ -0.67
HDAC9-218ENST00000456174 EIF5BO60841 1220 aaKnown RBP10.85□□□□□ -0.67
HDAC9-218ENST00000456174 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
HDAC9-218ENST00000456174 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
HDAC9-218ENST00000456174 MSH5O43196 834 aa10.85□□□□□ -0.67
HDAC9-218ENST00000456174 ERCC6L2Q5T890 1561 aa10.85□□□□□ -0.67
HDAC9-218ENST00000456174 DHX57Q6P158 1386 aaKnown RBP10.84□□□□□ -0.67
HDAC9-218ENST00000456174 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-218ENST00000456174 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
HDAC9-218ENST00000456174 ADCY10Q96PN6 1610 aa10.83□□□□□ -0.68
HDAC9-218ENST00000456174 TCOF1Q13428 1488 aaKnown RBP10.83□□□□□ -0.68
HDAC9-218ENST00000456174 SALL2Q9Y467 1007 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-218ENST00000456174 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
HDAC9-218ENST00000456174 ATP10BO94823 1461 aa10.82□□□□□ -0.68
HDAC9-218ENST00000456174 KIF14Q15058 1648 aa10.81□□□□□ -0.68
HDAC9-218ENST00000456174 FANCIQ9NVI1 1328 aa10.81□□□□□ -0.68
HDAC9-218ENST00000456174 DEKP35659 375 aaKnown RBP10.81□□□□□ -0.68
HDAC9-218ENST00000456174 ITSN2Q9NZM3 1697 aa10.81□□□□□ -0.68
HDAC9-218ENST00000456174 PTPRKQ15262 1439 aa10.8□□□□□ -0.68
HDAC9-218ENST00000456174 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
HDAC9-218ENST00000456174 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
HDAC9-218ENST00000456174 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
HDAC9-218ENST00000456174 ABCC2Q92887 1545 aa10.77□□□□□ -0.69
HDAC9-218ENST00000456174 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.69
HDAC9-218ENST00000456174 HFM1A2PYH4 1435 aa10.77□□□□□ -0.69
HDAC9-218ENST00000456174 GPATCH8Q9UKJ3 1502 aaKnown RBP10.76□□□□□ -0.69
HDAC9-218ENST00000456174 DNMT1P26358 1616 aaKnown RBP10.75□□□□□ -0.69
HDAC9-218ENST00000456174 NAIPQ13075 1403 aa10.75□□□□□ -0.69
HDAC9-218ENST00000456174 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
HDAC9-218ENST00000456174 CFDP1Q9UEE9 299 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-218ENST00000456174 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
HDAC9-218ENST00000456174 ZNF644Q9H582 1327 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-218ENST00000456174 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
HDAC9-218ENST00000456174 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
HDAC9-218ENST00000456174 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
HDAC9-218ENST00000456174 DAPK1P53355 1430 aa10.73□□□□□ -0.69
HDAC9-218ENST00000456174 NPM3O75607 178 aaKnown RBP10.72□□□□□ -0.69
HDAC9-218ENST00000456174 ZCCHC11Q5TAX3 1644 aaKnown RBP10.72□□□□□ -0.69
HDAC9-218ENST00000456174 UHRF1BP1LA0JNW5 1464 aa10.72□□□□□ -0.69
HDAC9-218ENST00000456174 AKNAQ7Z591 1439 aa10.72□□□□□ -0.69
HDAC9-218ENST00000456174 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
HDAC9-218ENST00000456174 ABCC5O15440 1437 aa10.71□□□□□ -0.69
HDAC9-218ENST00000456174 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
HDAC9-218ENST00000456174 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-218ENST00000456174 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
HDAC9-218ENST00000456174 CDC42BPBQ9Y5S2 1711 aa10.7□□□□□ -0.7
HDAC9-218ENST00000456174 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
HDAC9-218ENST00000456174 KDM5BQ9UGL1 1544 aa10.69□□□□□ -0.7
HDAC9-218ENST00000456174 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
HDAC9-218ENST00000456174 PKNOX2Q96KN3 472 aa10.69□□□□□ -0.7
HDAC9-218ENST00000456174 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
HDAC9-218ENST00000456174 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
HDAC9-218ENST00000456174 KDM6BO15054 1643 aa10.68□□□□□ -0.7
HDAC9-218ENST00000456174 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
HDAC9-218ENST00000456174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC9-218ENST00000456174 MYO5CQ9NQX4 1742 aa10.67□□□□□ -0.7
HDAC9-218ENST00000456174 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.71
HDAC9-218ENST00000456174 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
HDAC9-218ENST00000456174 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 ARHGEF5Q12774 1597 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 ARHGAP5Q13017 1502 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 NCOA1Q15788 1441 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
HDAC9-218ENST00000456174 SHANK2Q9UPX8 1470 aa10.62□□□□□ -0.71
HDAC9-218ENST00000456174 FKBP8Q14318 412 aa10.62□□□□□ -0.71
HDAC9-218ENST00000456174 BCANQ96GW7 911 aa10.62□□□□□ -0.71
HDAC9-218ENST00000456174 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC9-218ENST00000456174 ANKRD30AQ9BXX3 1397 aa10.61□□□□□ -0.71
HDAC9-218ENST00000456174 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
HDAC9-218ENST00000456174 C9orf84Q5VXU9 1444 aa10.6□□□□□ -0.71
HDAC9-218ENST00000456174 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
HDAC9-218ENST00000456174 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
HDAC9-218ENST00000456174 CCDC141Q6ZP82 1450 aa10.59□□□□□ -0.71
HDAC9-218ENST00000456174 WDR7Q9Y4E6 1490 aa10.59□□□□□ -0.71
HDAC9-218ENST00000456174 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
HDAC9-218ENST00000456174 TIMELESSQ9UNS1 1208 aa10.58□□□□□ -0.72
HDAC9-218ENST00000456174 PLCH2O75038 1416 aa10.58□□□□□ -0.72
HDAC9-218ENST00000456174 DENND4BO75064 1496 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-218ENST00000456174 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
HDAC9-218ENST00000456174 MPHOSPH9Q99550 1183 aa10.58□□□□□ -0.72
HDAC9-218ENST00000456174 PLEKHH2Q8IVE3 1493 aa10.58□□□□□ -0.72
HDAC9-218ENST00000456174 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-218ENST00000456174 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-218ENST00000456174 ANKRD50Q9ULJ7 1429 aa10.56□□□□□ -0.72
HDAC9-218ENST00000456174 KIAA1107Q9UPP5 1409 aa10.56□□□□□ -0.72
HDAC9-218ENST00000456174 EFCAB2Q5VUJ9 269 aa10.56□□□□□ -0.72
HDAC9-218ENST00000456174 ARXQ96QS3 562 aa10.56□□□□□ -0.72
HDAC9-218ENST00000456174 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
HDAC9-218ENST00000456174 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
HDAC9-218ENST00000456174 MAST1Q9Y2H9 1570 aa10.55□□□□□ -0.72
HDAC9-218ENST00000456174 NPM1P06748 294 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC9-218ENST00000456174 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
HDAC9-218ENST00000456174 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
HDAC9-218ENST00000456174 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-218ENST00000456174 TONSLQ96HA7 1378 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms