RNA–Protein interactions for RNA: ENST00000456026.1

LINC01653-201, Transcript of long intergenic non-protein coding RNA 1653, humanhuman

TSL 1 (best) BASIC

Gene LINC01653, Length 1,728 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01653-201ENST00000456026 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
LINC01653-201ENST00000456026 KIF14Q15058 1648 aa11.31□□□□□ -0.6
LINC01653-201ENST00000456026 MIA2Q96PC5 1412 aa11.3□□□□□ -0.6
LINC01653-201ENST00000456026 KDM6BO15054 1643 aa11.3□□□□□ -0.6
LINC01653-201ENST00000456026 PRG4Q92954 1404 aaPredicted RBP11.3□□□□□ -0.6
LINC01653-201ENST00000456026 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
LINC01653-201ENST00000456026 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
LINC01653-201ENST00000456026 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
LINC01653-201ENST00000456026 CDC42BPAQ5VT25 1732 aa11.27□□□□□ -0.61
LINC01653-201ENST00000456026 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
LINC01653-201ENST00000456026 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
LINC01653-201ENST00000456026 ATP10BO94823 1461 aa11.26□□□□□ -0.61
LINC01653-201ENST00000456026 SIN3AQ96ST3 1273 aa11.25□□□□□ -0.61
LINC01653-201ENST00000456026 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
LINC01653-201ENST00000456026 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
LINC01653-201ENST00000456026 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
LINC01653-201ENST00000456026 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
LINC01653-201ENST00000456026 CROCC2H7BZ55 1655 aa11.23□□□□□ -0.61
LINC01653-201ENST00000456026 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
LINC01653-201ENST00000456026 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
LINC01653-201ENST00000456026 ABCC5O15440 1437 aa11.22□□□□□ -0.61
LINC01653-201ENST00000456026 DAPK1P53355 1430 aa11.22□□□□□ -0.61
LINC01653-201ENST00000456026 CLASP1Q7Z460 1538 aa11.22□□□□□ -0.61
LINC01653-201ENST00000456026 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
LINC01653-201ENST00000456026 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
LINC01653-201ENST00000456026 ADGBQ8N7X0 1667 aa11.21□□□□□ -0.61
LINC01653-201ENST00000456026 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.61
LINC01653-201ENST00000456026 CAMSAP2Q08AD1 1489 aa11.21□□□□□ -0.62
LINC01653-201ENST00000456026 FOXD4L1Q9NU39 408 aa11.21□□□□□ -0.62
LINC01653-201ENST00000456026 PTPRGP23470 1445 aa11.2□□□□□ -0.62
LINC01653-201ENST00000456026 CDC42BPBQ9Y5S2 1711 aa11.19□□□□□ -0.62
LINC01653-201ENST00000456026 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
LINC01653-201ENST00000456026 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
LINC01653-201ENST00000456026 KDM5BQ9UGL1 1544 aa11.17□□□□□ -0.62
LINC01653-201ENST00000456026 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
LINC01653-201ENST00000456026 ABCC2Q92887 1545 aa11.15□□□□□ -0.62
LINC01653-201ENST00000456026 PREX2Q70Z35 1606 aa11.15□□□□□ -0.63
LINC01653-201ENST00000456026 CFDP1Q9UEE9 299 aaPredicted RBP11.15□□□□□ -0.63
LINC01653-201ENST00000456026 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
LINC01653-201ENST00000456026 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
LINC01653-201ENST00000456026 ADGRL2O95490 1459 aa11.14□□□□□ -0.63
LINC01653-201ENST00000456026 MIER1Q8N108 512 aa11.13□□□□□ -0.63
LINC01653-201ENST00000456026 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
LINC01653-201ENST00000456026 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
LINC01653-201ENST00000456026 NCOA1Q15788 1441 aa11.12□□□□□ -0.63
LINC01653-201ENST00000456026 ZCCHC11Q5TAX3 1644 aaKnown RBP11.12□□□□□ -0.63
LINC01653-201ENST00000456026 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
LINC01653-201ENST00000456026 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
LINC01653-201ENST00000456026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC01653-201ENST00000456026 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
LINC01653-201ENST00000456026 PZPP20742 1482 aa11.09□□□□□ -0.63
LINC01653-201ENST00000456026 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
LINC01653-201ENST00000456026 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
LINC01653-201ENST00000456026 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
LINC01653-201ENST00000456026 MBD5Q9P267 1494 aa11.09□□□□□ -0.63
LINC01653-201ENST00000456026 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
LINC01653-201ENST00000456026 UHRF1BP1LA0JNW5 1464 aa11.08□□□□□ -0.64
LINC01653-201ENST00000456026 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
LINC01653-201ENST00000456026 C9orf84Q5VXU9 1444 aa11.06□□□□□ -0.64
LINC01653-201ENST00000456026 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
LINC01653-201ENST00000456026 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
LINC01653-201ENST00000456026 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01653-201ENST00000456026 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
LINC01653-201ENST00000456026 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
LINC01653-201ENST00000456026 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
LINC01653-201ENST00000456026 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
LINC01653-201ENST00000456026 CCDC141Q6ZP82 1450 aa11.02□□□□□ -0.65
LINC01653-201ENST00000456026 ARHGAP5Q13017 1502 aa11.02□□□□□ -0.65
LINC01653-201ENST00000456026 ANKRD50Q9ULJ7 1429 aa11.02□□□□□ -0.65
LINC01653-201ENST00000456026 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
LINC01653-201ENST00000456026 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
LINC01653-201ENST00000456026 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
LINC01653-201ENST00000456026 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
LINC01653-201ENST00000456026 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
LINC01653-201ENST00000456026 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
LINC01653-201ENST00000456026 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 KIF15Q9NS87 1388 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 PLCH2O75038 1416 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 KIAA1107Q9UPP5 1409 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
LINC01653-201ENST00000456026 ABCC1P33527 1531 aa10.96□□□□□ -0.65
LINC01653-201ENST00000456026 UNC13BO14795 1591 aa10.96□□□□□ -0.65
LINC01653-201ENST00000456026 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
LINC01653-201ENST00000456026 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
LINC01653-201ENST00000456026 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
LINC01653-201ENST00000456026 YTHDC1Q96MU7 727 aaKnown RBP10.95□□□□□ -0.66
LINC01653-201ENST00000456026 PLEKHH2Q8IVE3 1493 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 ARAP3Q8WWN8 1544 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 ABCA9Q8IUA7 1624 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 DDX10Q13206 875 aaKnown RBP10.94□□□□□ -0.66
LINC01653-201ENST00000456026 PKD2Q13563 968 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 NUP155O75694 1391 aa10.94□□□□□ -0.66
LINC01653-201ENST00000456026 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
LINC01653-201ENST00000456026 POLR1AO95602 1720 aaPredicted RBP10.93□□□□□ -0.66
LINC01653-201ENST00000456026 CENPBP07199 599 aaPredicted RBP10.92□□□□□ -0.66
LINC01653-201ENST00000456026 FAM135AQ9P2D6 1515 aa10.92□□□□□ -0.66
LINC01653-201ENST00000456026 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
LINC01653-201ENST00000456026 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms