RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 POGZQ7Z3K3 1410 aa24.8■■□□□ 1.56
UBE2F-219ENST00000455999 SCAPERQ9BY12 1400 aa24.79■■□□□ 1.56
UBE2F-219ENST00000455999 KIF14Q15058 1648 aa24.79■■□□□ 1.56
UBE2F-219ENST00000455999 PLCH2O75038 1416 aa24.78■■□□□ 1.56
UBE2F-219ENST00000455999 MAGI2Q86UL8 1455 aa24.78■■□□□ 1.56
UBE2F-219ENST00000455999 MLECQ14165 292 aa24.78■■□□□ 1.56
UBE2F-219ENST00000455999 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
UBE2F-219ENST00000455999 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
UBE2F-219ENST00000455999 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
UBE2F-219ENST00000455999 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
UBE2F-219ENST00000455999 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
UBE2F-219ENST00000455999 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
UBE2F-219ENST00000455999 ATP10AO60312 1499 aa24.69■■□□□ 1.54
UBE2F-219ENST00000455999 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
UBE2F-219ENST00000455999 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
UBE2F-219ENST00000455999 EFCAB2Q5VUJ9 269 aa24.66■■□□□ 1.54
UBE2F-219ENST00000455999 ARHGAP5Q13017 1502 aa24.64■■□□□ 1.53
UBE2F-219ENST00000455999 SETD1BQ9UPS6 1966 aaKnown RBP24.63■■□□□ 1.53
UBE2F-219ENST00000455999 KDM5CP41229 1560 aa24.63■■□□□ 1.53
UBE2F-219ENST00000455999 TROQ12816 1431 aaPredicted RBP24.62■■□□□ 1.53
UBE2F-219ENST00000455999 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
UBE2F-219ENST00000455999 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
UBE2F-219ENST00000455999 DIP2CQ9Y2E4 1556 aa24.6■■□□□ 1.53
UBE2F-219ENST00000455999 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
UBE2F-219ENST00000455999 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
UBE2F-219ENST00000455999 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
UBE2F-219ENST00000455999 AFAP1Q8N556 730 aa24.58■■□□□ 1.53
UBE2F-219ENST00000455999 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
UBE2F-219ENST00000455999 ITSN2Q9NZM3 1697 aa24.56■■□□□ 1.52
UBE2F-219ENST00000455999 C3P01024 1663 aa24.56■■□□□ 1.52
UBE2F-219ENST00000455999 CLIP1P30622 1438 aa24.55■■□□□ 1.52
UBE2F-219ENST00000455999 CERKQ8TCT0 537 aa24.55■■□□□ 1.52
UBE2F-219ENST00000455999 CDC42BPAQ5VT25 1732 aa24.55■■□□□ 1.52
UBE2F-219ENST00000455999 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
UBE2F-219ENST00000455999 REREQ9P2R6 1566 aa24.51■■□□□ 1.51
UBE2F-219ENST00000455999 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
UBE2F-219ENST00000455999 ABCC1P33527 1531 aa24.51■■□□□ 1.51
UBE2F-219ENST00000455999 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
UBE2F-219ENST00000455999 TRAPPC8Q9Y2L5 1435 aa24.48■■□□□ 1.51
UBE2F-219ENST00000455999 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
UBE2F-219ENST00000455999 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
UBE2F-219ENST00000455999 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
UBE2F-219ENST00000455999 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
UBE2F-219ENST00000455999 AGLP35573 1532 aa24.42■■□□□ 1.5
UBE2F-219ENST00000455999 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
UBE2F-219ENST00000455999 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
UBE2F-219ENST00000455999 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
UBE2F-219ENST00000455999 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
UBE2F-219ENST00000455999 SYCP2Q9BX26 1530 aa24.33■■□□□ 1.49
UBE2F-219ENST00000455999 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
UBE2F-219ENST00000455999 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
UBE2F-219ENST00000455999 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
UBE2F-219ENST00000455999 CLTCQ00610 1675 aaKnown RBP24.3■■□□□ 1.48
UBE2F-219ENST00000455999 PTPRTO14522 1441 aa24.29■■□□□ 1.48
UBE2F-219ENST00000455999 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
UBE2F-219ENST00000455999 LTBP4Q8N2S1 1624 aa24.27■■□□□ 1.48
UBE2F-219ENST00000455999 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.48
UBE2F-219ENST00000455999 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.472e-6■■■□□ 16.1
UBE2F-219ENST00000455999 ATP7AQ04656 1500 aa24.25■■□□□ 1.47
UBE2F-219ENST00000455999 INO80Q9ULG1 1556 aaPredicted RBP24.25■■□□□ 1.47
UBE2F-219ENST00000455999 NCOA1Q15788 1441 aa24.24■■□□□ 1.47
UBE2F-219ENST00000455999 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
UBE2F-219ENST00000455999 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
UBE2F-219ENST00000455999 PLXNC1O60486 1568 aa24.2■■□□□ 1.47
UBE2F-219ENST00000455999 MYO3AQ8NEV4 1616 aa24.2■■□□□ 1.46
UBE2F-219ENST00000455999 ZMYM3Q14202 1370 aa24.19■■□□□ 1.46
UBE2F-219ENST00000455999 DISP3Q9P2K9 1392 aa24.19■■□□□ 1.46
UBE2F-219ENST00000455999 ZNF142P52746 1687 aaPredicted RBP24.19■■□□□ 1.46
UBE2F-219ENST00000455999 NPATQ14207 1427 aa24.18■■□□□ 1.46
UBE2F-219ENST00000455999 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
UBE2F-219ENST00000455999 ILDR2Q71H61 639 aa24.17■■□□□ 1.46
UBE2F-219ENST00000455999 A2MP01023 1474 aa24.15■■□□□ 1.46
UBE2F-219ENST00000455999 KIAA1107Q9UPP5 1409 aa24.15■■□□□ 1.46
UBE2F-219ENST00000455999 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
UBE2F-219ENST00000455999 PLEKHH2Q8IVE3 1493 aa24.13■■□□□ 1.45
UBE2F-219ENST00000455999 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
UBE2F-219ENST00000455999 NCKAP5LQ9HCH0 1330 aa24.12■■□□□ 1.45
UBE2F-219ENST00000455999 TIAM1Q13009 1591 aa24.12■■□□□ 1.45
UBE2F-219ENST00000455999 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
UBE2F-219ENST00000455999 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
UBE2F-219ENST00000455999 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
UBE2F-219ENST00000455999 MTUS2Q5JR59 1369 aa24.09■■□□□ 1.45
UBE2F-219ENST00000455999 GGT6Q6P531 493 aa24.09■■□□□ 1.45
UBE2F-219ENST00000455999 PTPRKQ15262 1439 aa24.09■■□□□ 1.45
UBE2F-219ENST00000455999 ZNF644Q9H582 1327 aaPredicted RBP24.08■■□□□ 1.44
UBE2F-219ENST00000455999 ZNF335Q9H4Z2 1342 aaPredicted RBP24.06■■□□□ 1.44
UBE2F-219ENST00000455999 PLA2R1Q13018 1463 aa24.04■■□□□ 1.44
UBE2F-219ENST00000455999 EHBP1L1Q8N3D4 1523 aa24.04■■□□□ 1.44
UBE2F-219ENST00000455999 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
UBE2F-219ENST00000455999 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
UBE2F-219ENST00000455999 POLR1AO95602 1720 aaPredicted RBP24.02■■□□□ 1.44
UBE2F-219ENST00000455999 DNMT1P26358 1616 aaKnown RBP24.01■■□□□ 1.43
UBE2F-219ENST00000455999 SOCS7O14512 581 aa23.98■■□□□ 1.43
UBE2F-219ENST00000455999 PKD2Q13563 968 aa23.98■■□□□ 1.43
UBE2F-219ENST00000455999 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
UBE2F-219ENST00000455999 RTEL1-TNFRSF6BF6WH68 1400 aa23.95■■□□□ 1.42
UBE2F-219ENST00000455999 CEP162Q5TB80 1403 aa23.94■■□□□ 1.42
UBE2F-219ENST00000455999 UBAP1LF5GYI3 381 aa23.94■■□□□ 1.42
UBE2F-219ENST00000455999 PPP6R1Q9UPN7 881 aa23.94■■□□□ 1.42
UBE2F-219ENST00000455999 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms