RNA–Protein interactions for RNA: ENST00000455953.1

NCBP2-208, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 5

Gene NCBP2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-208ENST00000455953 CUL7Q14999 1698 aa12.25□□□□□ -0.45
NCBP2-208ENST00000455953 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
NCBP2-208ENST00000455953 GSE1Q14687 1217 aa12.23□□□□□ -0.45
NCBP2-208ENST00000455953 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
NCBP2-208ENST00000455953 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
NCBP2-208ENST00000455953 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
NCBP2-208ENST00000455953 NUP160Q12769 1436 aa12.21□□□□□ -0.45
NCBP2-208ENST00000455953 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
NCBP2-208ENST00000455953 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
NCBP2-208ENST00000455953 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
NCBP2-208ENST00000455953 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
NCBP2-208ENST00000455953 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
NCBP2-208ENST00000455953 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
NCBP2-208ENST00000455953 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
NCBP2-208ENST00000455953 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
NCBP2-208ENST00000455953 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
NCBP2-208ENST00000455953 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
NCBP2-208ENST00000455953 ASTLQ6HA08 431 aaPredicted RBP12.13□□□□□ -0.47
NCBP2-208ENST00000455953 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
NCBP2-208ENST00000455953 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
NCBP2-208ENST00000455953 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
NCBP2-208ENST00000455953 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
NCBP2-208ENST00000455953 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
NCBP2-208ENST00000455953 TIE1P35590 1138 aa12.08□□□□□ -0.48
NCBP2-208ENST00000455953 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
NCBP2-208ENST00000455953 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
NCBP2-208ENST00000455953 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
NCBP2-208ENST00000455953 IGF1RP08069 1367 aa12.06□□□□□ -0.48
NCBP2-208ENST00000455953 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
NCBP2-208ENST00000455953 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
NCBP2-208ENST00000455953 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
NCBP2-208ENST00000455953 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
NCBP2-208ENST00000455953 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
NCBP2-208ENST00000455953 TSPOAP1O95153 1857 aa12.02□□□□□ -0.48
NCBP2-208ENST00000455953 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
NCBP2-208ENST00000455953 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
NCBP2-208ENST00000455953 PKD2Q13563 968 aa12□□□□□ -0.49
NCBP2-208ENST00000455953 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
NCBP2-208ENST00000455953 PTPRGP23470 1445 aa12□□□□□ -0.49
NCBP2-208ENST00000455953 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
NCBP2-208ENST00000455953 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
NCBP2-208ENST00000455953 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
NCBP2-208ENST00000455953 MAPKBP1O60336 1514 aa11.99□□□□□ -0.49
NCBP2-208ENST00000455953 TNIKQ9UKE5 1360 aa11.98□□□□□ -0.49
NCBP2-208ENST00000455953 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
NCBP2-208ENST00000455953 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
NCBP2-208ENST00000455953 LHX8Q68G74 356 aa11.96□□□□□ -0.49
NCBP2-208ENST00000455953 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
NCBP2-208ENST00000455953 PSEN1P49768 467 aa11.95□□□□□ -0.5
NCBP2-208ENST00000455953 DIP2BQ9P265 1576 aa11.95□□□□□ -0.5
NCBP2-208ENST00000455953 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
NCBP2-208ENST00000455953 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
NCBP2-208ENST00000455953 C7P10643 843 aa11.94□□□□□ -0.5
NCBP2-208ENST00000455953 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
NCBP2-208ENST00000455953 KDM6BO15054 1643 aa11.93□□□□□ -0.5
NCBP2-208ENST00000455953 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
NCBP2-208ENST00000455953 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
NCBP2-208ENST00000455953 KIAA0556O60303 1618 aa11.91□□□□□ -0.5
NCBP2-208ENST00000455953 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
NCBP2-208ENST00000455953 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
NCBP2-208ENST00000455953 PLB1Q6P1J6 1458 aa11.9□□□□□ -0.5
NCBP2-208ENST00000455953 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
NCBP2-208ENST00000455953 UACAQ9BZF9 1416 aa11.89□□□□□ -0.51
NCBP2-208ENST00000455953 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
NCBP2-208ENST00000455953 ZCCHC11Q5TAX3 1644 aaKnown RBP11.87□□□□□ -0.51
NCBP2-208ENST00000455953 RGL2O15211 777 aa11.87□□□□□ -0.51
NCBP2-208ENST00000455953 UHRF1BP1LA0JNW5 1464 aa11.87□□□□□ -0.51
NCBP2-208ENST00000455953 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
NCBP2-208ENST00000455953 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
NCBP2-208ENST00000455953 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
NCBP2-208ENST00000455953 IER5LQ5T953 404 aa11.85□□□□□ -0.51
NCBP2-208ENST00000455953 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
NCBP2-208ENST00000455953 EEA1Q15075 1411 aa11.83□□□□□ -0.52
NCBP2-208ENST00000455953 GLI2P10070 1586 aa11.83□□□□□ -0.52
NCBP2-208ENST00000455953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
NCBP2-208ENST00000455953 SEC24BO95487 1268 aa11.82□□□□□ -0.52
NCBP2-208ENST00000455953 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
NCBP2-208ENST00000455953 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
NCBP2-208ENST00000455953 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
NCBP2-208ENST00000455953 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
NCBP2-208ENST00000455953 KDM5BQ9UGL1 1544 aa11.8□□□□□ -0.52
NCBP2-208ENST00000455953 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
NCBP2-208ENST00000455953 MAP3K4Q9Y6R4 1608 aa11.78□□□□□ -0.52
NCBP2-208ENST00000455953 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
NCBP2-208ENST00000455953 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
NCBP2-208ENST00000455953 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.52
NCBP2-208ENST00000455953 EPRSP07814 1512 aaKnown RBP11.77□□□□□ -0.52
NCBP2-208ENST00000455953 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
NCBP2-208ENST00000455953 RANGAP1P46060 587 aaPredicted RBP11.76□□□□□ -0.53
NCBP2-208ENST00000455953 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
NCBP2-208ENST00000455953 PLCG2P16885 1265 aa11.75□□□□□ -0.53
NCBP2-208ENST00000455953 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
NCBP2-208ENST00000455953 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
NCBP2-208ENST00000455953 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
NCBP2-208ENST00000455953 ABCA8O94911 1581 aa11.75□□□□□ -0.53
NCBP2-208ENST00000455953 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
NCBP2-208ENST00000455953 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
NCBP2-208ENST00000455953 RAPGEF6Q8TEU7 1601 aa11.74□□□□□ -0.53
NCBP2-208ENST00000455953 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
NCBP2-208ENST00000455953 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms