RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 UHRF1BP1LA0JNW5 1464 aa9.18□□□□□ -0.94
MSH6-205ENST00000454137 POTEDQ86YR6 584 aa9.17□□□□□ -0.94
MSH6-205ENST00000454137 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
MSH6-205ENST00000454137 UACAQ9BZF9 1416 aa9.16□□□□□ -0.94
MSH6-205ENST00000454137 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
MSH6-205ENST00000454137 ABCC2Q92887 1545 aa9.15□□□□□ -0.94
MSH6-205ENST00000454137 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.94
MSH6-205ENST00000454137 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
MSH6-205ENST00000454137 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
MSH6-205ENST00000454137 MAGI3Q5TCQ9 1506 aa9.14□□□□□ -0.95
MSH6-205ENST00000454137 ERCC6L2Q5T890 1561 aa9.13□□□□□ -0.95
MSH6-205ENST00000454137 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
MSH6-205ENST00000454137 ATP10BO94823 1461 aa9.13□□□□□ -0.95
MSH6-205ENST00000454137 NCOA2Q15596 1464 aa9.13□□□□□ -0.95
MSH6-205ENST00000454137 TROQ12816 1431 aaPredicted RBP9.13□□□□□ -0.95
MSH6-205ENST00000454137 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
MSH6-205ENST00000454137 ATP1B4Q9UN42 357 aaPredicted RBP9.12□□□□□ -0.95
MSH6-205ENST00000454137 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
MSH6-205ENST00000454137 KDM5BQ9UGL1 1544 aa9.11□□□□□ -0.95
MSH6-205ENST00000454137 ABCB7O75027 752 aa9.11□□□□□ -0.95
MSH6-205ENST00000454137 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
MSH6-205ENST00000454137 MYOM3Q5VTT5 1437 aa9.11□□□□□ -0.95
MSH6-205ENST00000454137 PHLDB1Q86UU1 1377 aa9.11□□□□□ -0.95
MSH6-205ENST00000454137 ITSN2Q9NZM3 1697 aa9.1□□□□□ -0.95
MSH6-205ENST00000454137 TCOF1Q13428 1488 aaKnown RBP9.09□□□□□ -0.95
MSH6-205ENST00000454137 FGD6Q6ZV73 1430 aa9.09□□□□□ -0.95
MSH6-205ENST00000454137 KIF14Q15058 1648 aa9.08□□□□□ -0.96
MSH6-205ENST00000454137 ZCCHC11Q5TAX3 1644 aaKnown RBP9.07□□□□□ -0.96
MSH6-205ENST00000454137 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
MSH6-205ENST00000454137 PTPN23Q9H3S7 1636 aa9.06□□□□□ -0.96
MSH6-205ENST00000454137 ABCC10Q5T3U5 1492 aa9.06□□□□□ -0.96
MSH6-205ENST00000454137 DSG3P32926 999 aa9.04□□□□□ -0.96
MSH6-205ENST00000454137 CDC42BPAQ5VT25 1732 aa9.04□□□□□ -0.96
MSH6-205ENST00000454137 ARAP3Q8WWN8 1544 aa9.03□□□□□ -0.96
MSH6-205ENST00000454137 GPATCH8Q9UKJ3 1502 aaKnown RBP9.03□□□□□ -0.96
MSH6-205ENST00000454137 ACIN1Q9UKV3 1341 aaKnown RBP9.03□□□□□ -0.96
MSH6-205ENST00000454137 AKNAQ7Z591 1439 aa9.02□□□□□ -0.97
MSH6-205ENST00000454137 PREX2Q70Z35 1606 aa9.02□□□□□ -0.97
MSH6-205ENST00000454137 SPDYE2BA6NHP3 402 aa9.01□□□□□ -0.97
MSH6-205ENST00000454137 SPDYE6P0CI01 402 aa9.01□□□□□ -0.97
MSH6-205ENST00000454137 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
MSH6-205ENST00000454137 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
MSH6-205ENST00000454137 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
MSH6-205ENST00000454137 MYO5CQ9NQX4 1742 aa9□□□□□ -0.97
MSH6-205ENST00000454137 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
MSH6-205ENST00000454137 STAG3Q9UJ98 1225 aa9□□□□□ -0.97
MSH6-205ENST00000454137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9□□□□□ -0.97
MSH6-205ENST00000454137 CDC42BPBQ9Y5S2 1711 aa9□□□□□ -0.97
MSH6-205ENST00000454137 RIMBP3CA6NJZ7 1639 aa8.99□□□□□ -0.97
MSH6-205ENST00000454137 RIMBP3BA6NNM3 1639 aa8.99□□□□□ -0.97
MSH6-205ENST00000454137 RIMBP3Q9UFD9 1639 aa8.99□□□□□ -0.97
MSH6-205ENST00000454137 WDR7Q9Y4E6 1490 aa8.99□□□□□ -0.97
MSH6-205ENST00000454137 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
MSH6-205ENST00000454137 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
MSH6-205ENST00000454137 CLSPNQ9HAW4 1339 aa8.98□□□□□ -0.97
MSH6-205ENST00000454137 ARHGEF5Q12774 1597 aa8.98□□□□□ -0.97
MSH6-205ENST00000454137 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
MSH6-205ENST00000454137 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 HFM1A2PYH4 1435 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 PLEKHH2Q8IVE3 1493 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 MAPKBP1O60336 1514 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 TTC37Q6PGP7 1564 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 GCC2Q8IWJ2 1684 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 SETD5Q9C0A6 1442 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 KIAA1107Q9UPP5 1409 aa8.97□□□□□ -0.97
MSH6-205ENST00000454137 CAMSAP2Q08AD1 1489 aa8.96□□□□□ -0.97
MSH6-205ENST00000454137 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.97
MSH6-205ENST00000454137 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.98
MSH6-205ENST00000454137 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
MSH6-205ENST00000454137 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.98
MSH6-205ENST00000454137 PLCH2O75038 1416 aa8.96□□□□□ -0.98
MSH6-205ENST00000454137 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
MSH6-205ENST00000454137 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
MSH6-205ENST00000454137 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
MSH6-205ENST00000454137 DAPK1P53355 1430 aa8.95□□□□□ -0.98
MSH6-205ENST00000454137 ASXL2Q76L83 1435 aa8.95□□□□□ -0.98
MSH6-205ENST00000454137 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
MSH6-205ENST00000454137 SSUH2Q9Y2M2 353 aa8.94□□□□□ -0.98
MSH6-205ENST00000454137 ABCC5O15440 1437 aa8.94□□□□□ -0.98
MSH6-205ENST00000454137 PTPRKQ15262 1439 aa8.94□□□□□ -0.98
MSH6-205ENST00000454137 MAST1Q9Y2H9 1570 aa8.94□□□□□ -0.98
MSH6-205ENST00000454137 GLI2P10070 1586 aa8.93□□□□□ -0.98
MSH6-205ENST00000454137 SAMD9LQ8IVG5 1584 aa8.93□□□□□ -0.98
MSH6-205ENST00000454137 CFAP74Q9C0B2 1584 aa8.92□□□□□ -0.98
MSH6-205ENST00000454137 MBD5Q9P267 1494 aa8.92□□□□□ -0.98
MSH6-205ENST00000454137 NAIPQ13075 1403 aa8.92□□□□□ -0.98
MSH6-205ENST00000454137 ITGAEP38570 1179 aa8.92□□□□□ -0.98
MSH6-205ENST00000454137 ARHGAP5Q13017 1502 aa8.91□□□□□ -0.98
MSH6-205ENST00000454137 RAB3GAP2Q9H2M9 1393 aa8.91□□□□□ -0.98
MSH6-205ENST00000454137 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
MSH6-205ENST00000454137 CCDC141Q6ZP82 1450 aa8.9□□□□□ -0.98
MSH6-205ENST00000454137 EFCAB2Q5VUJ9 269 aa8.9□□□□□ -0.98
MSH6-205ENST00000454137 SPOCK2Q92563 424 aa8.9□□□□□ -0.98
MSH6-205ENST00000454137 ABCC1P33527 1531 aa8.9□□□□□ -0.99
MSH6-205ENST00000454137 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
MSH6-205ENST00000454137 PLXNC1O60486 1568 aa8.89□□□□□ -0.99
MSH6-205ENST00000454137 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
MSH6-205ENST00000454137 ZNF644Q9H582 1327 aaPredicted RBP8.88□□□□□ -0.99
MSH6-205ENST00000454137 RTEL1-TNFRSF6BF6WH68 1400 aa8.88□□□□□ -0.99
MSH6-205ENST00000454137 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms