RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
HCG18-239ENST00000454129 CASC1Q6TDU7 716 aa8.51□□□□□ -1.05
HCG18-239ENST00000454129 MPHOSPH9Q99550 1183 aa8.51□□□□□ -1.05
HCG18-239ENST00000454129 MS4A1P11836 297 aa8.5□□□□□ -1.05
HCG18-239ENST00000454129 EFCAB2Q5VUJ9 269 aa8.5□□□□□ -1.05
HCG18-239ENST00000454129 PNNQ9H307 717 aaKnown RBP8.5□□□□□ -1.05
HCG18-239ENST00000454129 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
HCG18-239ENST00000454129 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
HCG18-239ENST00000454129 TRIM44Q96DX7 344 aaPredicted RBP8.49□□□□□ -1.05
HCG18-239ENST00000454129 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
HCG18-239ENST00000454129 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
HCG18-239ENST00000454129 NUP155O75694 1391 aa8.49□□□□□ -1.05
HCG18-239ENST00000454129 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
HCG18-239ENST00000454129 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
HCG18-239ENST00000454129 OS9Q13438 667 aaPredicted RBP8.48□□□□□ -1.05
HCG18-239ENST00000454129 PDS5BQ9NTI5 1447 aa8.48□□□□□ -1.05
HCG18-239ENST00000454129 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
HCG18-239ENST00000454129 PEG3Q9GZU2 1588 aa8.47□□□□□ -1.05
HCG18-239ENST00000454129 RUSC2Q8N2Y8 1516 aa8.46□□□□□ -1.06
HCG18-239ENST00000454129 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.06
HCG18-239ENST00000454129 KIF3BO15066 747 aa8.46□□□□□ -1.06
HCG18-239ENST00000454129 ZRSR1Q15695 479 aaKnown RBP8.46□□□□□ -1.06
HCG18-239ENST00000454129 FMN1Q68DA7 1419 aa8.46□□□□□ -1.06
HCG18-239ENST00000454129 L3MBTL2Q969R5 705 aa8.45□□□□□ -1.06
HCG18-239ENST00000454129 U2AF1L5P0DN76 240 aaPredicted RBP8.45□□□□□ -1.06
HCG18-239ENST00000454129 HNRNPMP52272 730 aaKnown RBP eCLIP8.45□□□□□ -1.062e-7■□□□□ 10.1
HCG18-239ENST00000454129 U2AF1Q01081 240 aaKnown RBP eCLIP8.45□□□□□ -1.06
HCG18-239ENST00000454129 NPHP1O15259 732 aa8.45□□□□□ -1.06
HCG18-239ENST00000454129 KCNJ4P48050 445 aa8.45□□□□□ -1.06
HCG18-239ENST00000454129 FGD1P98174 961 aa8.45□□□□□ -1.06
HCG18-239ENST00000454129 TAOK2Q9UL54 1235 aa8.45□□□□□ -1.06
HCG18-239ENST00000454129 HDGFL2Q7Z4V5 671 aaPredicted RBP8.44□□□□□ -1.06
HCG18-239ENST00000454129 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
HCG18-239ENST00000454129 PTMAP06454 111 aaKnown RBP8.44□□□□□ -1.06
HCG18-239ENST00000454129 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
HCG18-239ENST00000454129 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
HCG18-239ENST00000454129 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
HCG18-239ENST00000454129 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
HCG18-239ENST00000454129 NOP58Q9Y2X3 529 aaKnown RBP8.43□□□□□ -1.06
HCG18-239ENST00000454129 ROCK2O75116 1388 aaKnown RBP8.43□□□□□ -1.06
HCG18-239ENST00000454129 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
HCG18-239ENST00000454129 HSP90AB1P08238 724 aaKnown RBP8.43□□□□□ -1.06
HCG18-239ENST00000454129 PAK3O75914 559 aaPredicted RBP8.42□□□□□ -1.06
HCG18-239ENST00000454129 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
HCG18-239ENST00000454129 RALBP1Q15311 655 aa8.41□□□□□ -1.06
HCG18-239ENST00000454129 RCAN3Q9UKA8 241 aa8.41□□□□□ -1.06
HCG18-239ENST00000454129 FHOD3Q2V2M9 1422 aa8.41□□□□□ -1.06
HCG18-239ENST00000454129 APBB1O00213 710 aa8.41□□□□□ -1.06
HCG18-239ENST00000454129 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.06
HCG18-239ENST00000454129 IPO8O15397 1037 aaKnown RBP8.4□□□□□ -1.06
HCG18-239ENST00000454129 SPAG9O60271 1321 aaKnown RBP8.4□□□□□ -1.07
HCG18-239ENST00000454129 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.07
HCG18-239ENST00000454129 RSPH4AQ5TD94 716 aa8.39□□□□□ -1.07
HCG18-239ENST00000454129 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
HCG18-239ENST00000454129 DNTTIP2Q5QJE6 756 aaKnown RBP8.39□□□□□ -1.07
HCG18-239ENST00000454129 WASHC2CQ9Y4E1 1318 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 ERICH6BQ5W0A0 696 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
HCG18-239ENST00000454129 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 SPRYD3Q8NCJ5 442 aa8.38□□□□□ -1.07
HCG18-239ENST00000454129 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
HCG18-239ENST00000454129 TERF2IPQ9NYB0 399 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
HCG18-239ENST00000454129 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 ITPRIPQ8IWB1 547 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
HCG18-239ENST00000454129 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
HCG18-239ENST00000454129 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
HCG18-239ENST00000454129 RWDD1Q9H446 243 aaPredicted RBP8.35□□□□□ -1.07
HCG18-239ENST00000454129 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
HCG18-239ENST00000454129 CCDC146Q8IYE0 955 aa8.35□□□□□ -1.07
HCG18-239ENST00000454129 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
HCG18-239ENST00000454129 MCCP23508 829 aa8.34□□□□□ -1.07
HCG18-239ENST00000454129 FANCIQ9NVI1 1328 aa8.34□□□□□ -1.07
HCG18-239ENST00000454129 KIF21BO75037 1637 aa8.34□□□□□ -1.07
HCG18-239ENST00000454129 AQRO60306 1485 aaKnown RBP eCLIP8.34□□□□□ -1.07
HCG18-239ENST00000454129 NGDNQ8NEJ9 315 aaKnown RBP8.34□□□□□ -1.07
HCG18-239ENST00000454129 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
HCG18-239ENST00000454129 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 CCDC18Q5T9S5 1454 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
HCG18-239ENST00000454129 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 CFTRP13569 1480 aa8.33□□□□□ -1.08
HCG18-239ENST00000454129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■■■■□ 21.3
HCG18-239ENST00000454129 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
HCG18-239ENST00000454129 TCERG1O14776 1098 aaKnown RBP8.32□□□□□ -1.08
HCG18-239ENST00000454129 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
HCG18-239ENST00000454129 MAPKBP1O60336 1514 aa8.32□□□□□ -1.08
HCG18-239ENST00000454129 HMGXB3Q12766 1538 aa8.32□□□□□ -1.08
HCG18-239ENST00000454129 PANK3Q9H999 370 aa8.32□□□□□ -1.08
HCG18-239ENST00000454129 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
HCG18-239ENST00000454129 SLKQ9H2G2 1235 aaPredicted RBP8.31□□□□□ -1.08
HCG18-239ENST00000454129 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
HCG18-239ENST00000454129 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms