RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 GPATCH8Q9UKJ3 1502 aaKnown RBP22.12■■□□□ 1.13
CCHCR1-208ENST00000451521 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
CCHCR1-208ENST00000451521 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
CCHCR1-208ENST00000451521 ABCC5O15440 1437 aa22.1■■□□□ 1.13
CCHCR1-208ENST00000451521 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
CCHCR1-208ENST00000451521 CHIC2Q9UKJ5 165 aa22.08■■□□□ 1.13
CCHCR1-208ENST00000451521 KDM6BO15054 1643 aa22.07■■□□□ 1.12
CCHCR1-208ENST00000451521 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
CCHCR1-208ENST00000451521 ABCC10Q5T3U5 1492 aa22.06■■□□□ 1.12
CCHCR1-208ENST00000451521 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
CCHCR1-208ENST00000451521 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
CCHCR1-208ENST00000451521 MIER1Q8N108 512 aa22.05■■□□□ 1.12
CCHCR1-208ENST00000451521 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
CCHCR1-208ENST00000451521 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
CCHCR1-208ENST00000451521 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
CCHCR1-208ENST00000451521 CROCC2H7BZ55 1655 aa22.01■■□□□ 1.11
CCHCR1-208ENST00000451521 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
CCHCR1-208ENST00000451521 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
CCHCR1-208ENST00000451521 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
CCHCR1-208ENST00000451521 ADGRL2O95490 1459 aa21.97■■□□□ 1.11
CCHCR1-208ENST00000451521 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
CCHCR1-208ENST00000451521 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
CCHCR1-208ENST00000451521 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
CCHCR1-208ENST00000451521 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
CCHCR1-208ENST00000451521 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
CCHCR1-208ENST00000451521 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
CCHCR1-208ENST00000451521 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
CCHCR1-208ENST00000451521 MPHOSPH9Q99550 1183 aa21.9■■□□□ 1.1
CCHCR1-208ENST00000451521 PREX2Q70Z35 1606 aa21.89■■□□□ 1.09
CCHCR1-208ENST00000451521 KDM5BQ9UGL1 1544 aa21.88■■□□□ 1.09
CCHCR1-208ENST00000451521 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
CCHCR1-208ENST00000451521 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
CCHCR1-208ENST00000451521 UHRF1BP1LA0JNW5 1464 aa21.87■■□□□ 1.09
CCHCR1-208ENST00000451521 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
CCHCR1-208ENST00000451521 ANKRD30AQ9BXX3 1397 aa21.85■■□□□ 1.09
CCHCR1-208ENST00000451521 SAMD9LQ8IVG5 1584 aa21.82■■□□□ 1.08
CCHCR1-208ENST00000451521 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
CCHCR1-208ENST00000451521 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
CCHCR1-208ENST00000451521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.81■■□□□ 1.081e-5■■■■□ 25.8
CCHCR1-208ENST00000451521 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
CCHCR1-208ENST00000451521 TTC37Q6PGP7 1564 aa21.81■■□□□ 1.08
CCHCR1-208ENST00000451521 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
CCHCR1-208ENST00000451521 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
CCHCR1-208ENST00000451521 PZPP20742 1482 aa21.79■■□□□ 1.08
CCHCR1-208ENST00000451521 MYO5CQ9NQX4 1742 aa21.76■■□□□ 1.07
CCHCR1-208ENST00000451521 ANKRD50Q9ULJ7 1429 aa21.76■■□□□ 1.07
CCHCR1-208ENST00000451521 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
CCHCR1-208ENST00000451521 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
CCHCR1-208ENST00000451521 RSPH4AQ5TD94 716 aa21.74■■□□□ 1.07
CCHCR1-208ENST00000451521 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
CCHCR1-208ENST00000451521 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
CCHCR1-208ENST00000451521 SLC4A1APQ9BWU0 796 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-208ENST00000451521 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.07
CCHCR1-208ENST00000451521 ARHGAP5Q13017 1502 aa21.72■■□□□ 1.07
CCHCR1-208ENST00000451521 MAST1Q9Y2H9 1570 aa21.71■■□□□ 1.07
CCHCR1-208ENST00000451521 FOXD1Q16676 465 aa21.71■■□□□ 1.07
CCHCR1-208ENST00000451521 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
CCHCR1-208ENST00000451521 SUPT16HQ9Y5B9 1047 aaKnown RBP21.7■■□□□ 1.06
CCHCR1-208ENST00000451521 KIAA1107Q9UPP5 1409 aa21.69■■□□□ 1.06
CCHCR1-208ENST00000451521 PLEKHH2Q8IVE3 1493 aa21.69■■□□□ 1.06
CCHCR1-208ENST00000451521 SYCP2Q9BX26 1530 aa21.68■■□□□ 1.06
CCHCR1-208ENST00000451521 ANP32EQ9BTT0 268 aa21.68■■□□□ 1.06
CCHCR1-208ENST00000451521 KIF15Q9NS87 1388 aa21.67■■□□□ 1.06
CCHCR1-208ENST00000451521 TEX14Q8IWB6 1497 aa21.66■■□□□ 1.06
CCHCR1-208ENST00000451521 PLCH2O75038 1416 aa21.66■■□□□ 1.06
CCHCR1-208ENST00000451521 L3MBTL2Q969R5 705 aa21.64■■□□□ 1.06
CCHCR1-208ENST00000451521 PLXNC1O60486 1568 aa21.62■■□□□ 1.05
CCHCR1-208ENST00000451521 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
CCHCR1-208ENST00000451521 NUP155O75694 1391 aa21.59■■□□□ 1.05
CCHCR1-208ENST00000451521 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
CCHCR1-208ENST00000451521 PKD2Q13563 968 aa21.58■■□□□ 1.05
CCHCR1-208ENST00000451521 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
CCHCR1-208ENST00000451521 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
CCHCR1-208ENST00000451521 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
CCHCR1-208ENST00000451521 ABCC1P33527 1531 aa21.57■■□□□ 1.04
CCHCR1-208ENST00000451521 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
CCHCR1-208ENST00000451521 EFCAB2Q5VUJ9 269 aa21.55■■□□□ 1.04
CCHCR1-208ENST00000451521 UNC13BO14795 1591 aa21.55■■□□□ 1.04
CCHCR1-208ENST00000451521 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
CCHCR1-208ENST00000451521 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
CCHCR1-208ENST00000451521 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
CCHCR1-208ENST00000451521 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
CCHCR1-208ENST00000451521 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
CCHCR1-208ENST00000451521 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
CCHCR1-208ENST00000451521 EIF4G2P78344 907 aaKnown RBP eCLIP21.48■■□□□ 1.03
CCHCR1-208ENST00000451521 ASXL2Q76L83 1435 aa21.46■■□□□ 1.03
CCHCR1-208ENST00000451521 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
CCHCR1-208ENST00000451521 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
CCHCR1-208ENST00000451521 TRAPPC8Q9Y2L5 1435 aa21.46■■□□□ 1.03
CCHCR1-208ENST00000451521 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
CCHCR1-208ENST00000451521 RTEL1-TNFRSF6BF6WH68 1400 aa21.44■■□□□ 1.02
CCHCR1-208ENST00000451521 SPATA31E1Q6ZUB1 1445 aa21.43■■□□□ 1.02
CCHCR1-208ENST00000451521 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
CCHCR1-208ENST00000451521 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
CCHCR1-208ENST00000451521 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
CCHCR1-208ENST00000451521 FANCAO15360 1455 aa21.4■■□□□ 1.02
CCHCR1-208ENST00000451521 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
CCHCR1-208ENST00000451521 ZFYVE16Q7Z3T8 1539 aa21.39■■□□□ 1.02
CCHCR1-208ENST00000451521 PRKCSHP14314 528 aaPredicted RBP21.39■■□□□ 1.01
CCHCR1-208ENST00000451521 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms