RNA–Protein interactions for RNA: ENST00000450623.6

LINC01440-202, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 2

Gene LINC01440, Length 667 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-202ENST00000450623 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
LINC01440-202ENST00000450623 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
LINC01440-202ENST00000450623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01440-202ENST00000450623 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
LINC01440-202ENST00000450623 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
LINC01440-202ENST00000450623 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
LINC01440-202ENST00000450623 BCANQ96GW7 911 aa11.25□□□□□ -0.61
LINC01440-202ENST00000450623 IER5LQ5T953 404 aa11.24□□□□□ -0.61
LINC01440-202ENST00000450623 SNPHO15079 494 aa11.21□□□□□ -0.61
LINC01440-202ENST00000450623 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
LINC01440-202ENST00000450623 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
LINC01440-202ENST00000450623 PDCD7Q8N8D1 485 aaKnown RBP11.19□□□□□ -0.62
LINC01440-202ENST00000450623 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
LINC01440-202ENST00000450623 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
LINC01440-202ENST00000450623 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
LINC01440-202ENST00000450623 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
LINC01440-202ENST00000450623 EMP3P54852 163 aa11.16□□□□□ -0.62
LINC01440-202ENST00000450623 PLCG2P16885 1265 aa11.14□□□□□ -0.63
LINC01440-202ENST00000450623 PDE4AP27815 886 aa11.14□□□□□ -0.63
LINC01440-202ENST00000450623 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
LINC01440-202ENST00000450623 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
LINC01440-202ENST00000450623 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
LINC01440-202ENST00000450623 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
LINC01440-202ENST00000450623 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
LINC01440-202ENST00000450623 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
LINC01440-202ENST00000450623 NBR1Q14596 966 aa11.09□□□□□ -0.63
LINC01440-202ENST00000450623 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
LINC01440-202ENST00000450623 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
LINC01440-202ENST00000450623 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
LINC01440-202ENST00000450623 G3V3G9 751 aa11.07□□□□□ -0.64
LINC01440-202ENST00000450623 MFSD10Q14728 455 aa11.07□□□□□ -0.64
LINC01440-202ENST00000450623 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
LINC01440-202ENST00000450623 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
LINC01440-202ENST00000450623 E2F4Q16254 413 aa11.05□□□□□ -0.64
LINC01440-202ENST00000450623 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
LINC01440-202ENST00000450623 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
LINC01440-202ENST00000450623 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
LINC01440-202ENST00000450623 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
LINC01440-202ENST00000450623 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
LINC01440-202ENST00000450623 CAMK2BQ13554 666 aa10.97□□□□□ -0.65
LINC01440-202ENST00000450623 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
LINC01440-202ENST00000450623 KIF3CO14782 793 aa10.95□□□□□ -0.66
LINC01440-202ENST00000450623 FOXK1P85037 733 aa10.95□□□□□ -0.66
LINC01440-202ENST00000450623 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
LINC01440-202ENST00000450623 DSG2Q14126 1118 aa10.94□□□□□ -0.66
LINC01440-202ENST00000450623 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
LINC01440-202ENST00000450623 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
LINC01440-202ENST00000450623 PLPP6Q8IY26 295 aa10.9□□□□□ -0.66
LINC01440-202ENST00000450623 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
LINC01440-202ENST00000450623 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
LINC01440-202ENST00000450623 MYT1Q01538 1121 aa10.86□□□□□ -0.67
LINC01440-202ENST00000450623 EMILIN3Q9NT22 766 aa10.85□□□□□ -0.67
LINC01440-202ENST00000450623 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
LINC01440-202ENST00000450623 SEMA3EO15041 775 aa10.82□□□□□ -0.68
LINC01440-202ENST00000450623 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
LINC01440-202ENST00000450623 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
LINC01440-202ENST00000450623 TULP1O00294 542 aaPredicted RBP10.8□□□□□ -0.68
LINC01440-202ENST00000450623 DPYSL4O14531 572 aa10.8□□□□□ -0.68
LINC01440-202ENST00000450623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC01440-202ENST00000450623 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
LINC01440-202ENST00000450623 SMYD5Q6GMV2 418 aa10.77□□□□□ -0.69
LINC01440-202ENST00000450623 MAP3K9P80192 1104 aa10.76□□□□□ -0.69
LINC01440-202ENST00000450623 PDIA6Q15084 440 aa10.76□□□□□ -0.69
LINC01440-202ENST00000450623 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
LINC01440-202ENST00000450623 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
LINC01440-202ENST00000450623 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01440-202ENST00000450623 SLC34A2O95436 690 aa10.73□□□□□ -0.69
LINC01440-202ENST00000450623 PTCD2Q8WV60 388 aaKnown RBP10.72□□□□□ -0.69
LINC01440-202ENST00000450623 TBC1D12O60347 775 aa10.71□□□□□ -0.69
LINC01440-202ENST00000450623 ERBB3P21860 1342 aa10.69□□□□□ -0.7
LINC01440-202ENST00000450623 MLLT3P42568 568 aaPredicted RBP10.69□□□□□ -0.7
LINC01440-202ENST00000450623 EVI5O60447 810 aa10.65□□□□□ -0.7
LINC01440-202ENST00000450623 PTGER2P43116 358 aa10.65□□□□□ -0.7
LINC01440-202ENST00000450623 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
LINC01440-202ENST00000450623 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
LINC01440-202ENST00000450623 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
LINC01440-202ENST00000450623 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
LINC01440-202ENST00000450623 ABCC9O60706 1549 aa10.62□□□□□ -0.71
LINC01440-202ENST00000450623 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
LINC01440-202ENST00000450623 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
LINC01440-202ENST00000450623 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
LINC01440-202ENST00000450623 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
LINC01440-202ENST00000450623 RBM26Q5T8P6 1007 aaKnown RBP10.6□□□□□ -0.71
LINC01440-202ENST00000450623 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
LINC01440-202ENST00000450623 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
LINC01440-202ENST00000450623 DDX12PQ92771 950 aa10.57□□□□□ -0.72
LINC01440-202ENST00000450623 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
LINC01440-202ENST00000450623 OSBPP22059 807 aa10.56□□□□□ -0.72
LINC01440-202ENST00000450623 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
LINC01440-202ENST00000450623 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
LINC01440-202ENST00000450623 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
LINC01440-202ENST00000450623 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
LINC01440-202ENST00000450623 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
LINC01440-202ENST00000450623 ZMYND10O75800 440 aa10.53□□□□□ -0.72
LINC01440-202ENST00000450623 PHF14O94880 888 aa10.52□□□□□ -0.73
LINC01440-202ENST00000450623 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
LINC01440-202ENST00000450623 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
LINC01440-202ENST00000450623 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
LINC01440-202ENST00000450623 EPAS1Q99814 870 aa10.51□□□□□ -0.73
LINC01440-202ENST00000450623 NUDT7P0C024 238 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms