RNA–Protein interactions for RNA: ENST00000450623.6

LINC01440-202, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 2

Gene LINC01440, Length 667 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-202ENST00000450623 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
LINC01440-202ENST00000450623 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
LINC01440-202ENST00000450623 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
LINC01440-202ENST00000450623 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
LINC01440-202ENST00000450623 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
LINC01440-202ENST00000450623 FOXD1Q16676 465 aa20.13■□□□□ 0.81
LINC01440-202ENST00000450623 MSH5O43196 834 aa19.26■□□□□ 0.67
LINC01440-202ENST00000450623 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
LINC01440-202ENST00000450623 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
LINC01440-202ENST00000450623 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
LINC01440-202ENST00000450623 ADRA2BP18089 450 aa17.77■□□□□ 0.44
LINC01440-202ENST00000450623 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
LINC01440-202ENST00000450623 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
LINC01440-202ENST00000450623 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
LINC01440-202ENST00000450623 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
LINC01440-202ENST00000450623 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
LINC01440-202ENST00000450623 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
LINC01440-202ENST00000450623 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
LINC01440-202ENST00000450623 KCNA4P22459 653 aa16.19■□□□□ 0.18
LINC01440-202ENST00000450623 POTEHQ6S545 545 aa16.17■□□□□ 0.18
LINC01440-202ENST00000450623 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
LINC01440-202ENST00000450623 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
LINC01440-202ENST00000450623 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
LINC01440-202ENST00000450623 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
LINC01440-202ENST00000450623 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
LINC01440-202ENST00000450623 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
LINC01440-202ENST00000450623 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
LINC01440-202ENST00000450623 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
LINC01440-202ENST00000450623 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
LINC01440-202ENST00000450623 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
LINC01440-202ENST00000450623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC01440-202ENST00000450623 DSG3P32926 999 aa14.91□□□□□ -0.02
LINC01440-202ENST00000450623 ZBTB22O15209 634 aa14.89□□□□□ -0.03
LINC01440-202ENST00000450623 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
LINC01440-202ENST00000450623 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
LINC01440-202ENST00000450623 CAPN15O75808 1086 aa14.71□□□□□ -0.05
LINC01440-202ENST00000450623 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
LINC01440-202ENST00000450623 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
LINC01440-202ENST00000450623 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
LINC01440-202ENST00000450623 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
LINC01440-202ENST00000450623 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
LINC01440-202ENST00000450623 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
LINC01440-202ENST00000450623 ABCB7O75027 752 aa14.29□□□□□ -0.12
LINC01440-202ENST00000450623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
LINC01440-202ENST00000450623 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
LINC01440-202ENST00000450623 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
LINC01440-202ENST00000450623 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
LINC01440-202ENST00000450623 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
LINC01440-202ENST00000450623 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
LINC01440-202ENST00000450623 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
LINC01440-202ENST00000450623 APLP2Q06481 763 aa14.05□□□□□ -0.16
LINC01440-202ENST00000450623 HAX1O00165 279 aa13.94□□□□□ -0.18
LINC01440-202ENST00000450623 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
LINC01440-202ENST00000450623 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
LINC01440-202ENST00000450623 EVX2Q03828 476 aa13.69□□□□□ -0.22
LINC01440-202ENST00000450623 LHX8Q68G74 356 aa13.66□□□□□ -0.22
LINC01440-202ENST00000450623 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
LINC01440-202ENST00000450623 POLA2Q14181 598 aa13.62□□□□□ -0.23
LINC01440-202ENST00000450623 FKBP8Q14318 412 aa13.58□□□□□ -0.24
LINC01440-202ENST00000450623 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
LINC01440-202ENST00000450623 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC01440-202ENST00000450623 FBLN2P98095 1184 aa13.48□□□□□ -0.25
LINC01440-202ENST00000450623 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
LINC01440-202ENST00000450623 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
LINC01440-202ENST00000450623 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
LINC01440-202ENST00000450623 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
LINC01440-202ENST00000450623 GABBR2O75899 941 aa13.28□□□□□ -0.28
LINC01440-202ENST00000450623 PROM2Q8N271 834 aa13.15□□□□□ -0.3
LINC01440-202ENST00000450623 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
LINC01440-202ENST00000450623 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
LINC01440-202ENST00000450623 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
LINC01440-202ENST00000450623 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
LINC01440-202ENST00000450623 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
LINC01440-202ENST00000450623 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
LINC01440-202ENST00000450623 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
LINC01440-202ENST00000450623 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
LINC01440-202ENST00000450623 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
LINC01440-202ENST00000450623 POTEIP0CG38 1075 aa13□□□□□ -0.33
LINC01440-202ENST00000450623 POTEMA6NI47 508 aa12.94□□□□□ -0.34
LINC01440-202ENST00000450623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC01440-202ENST00000450623 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
LINC01440-202ENST00000450623 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
LINC01440-202ENST00000450623 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
LINC01440-202ENST00000450623 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
LINC01440-202ENST00000450623 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
LINC01440-202ENST00000450623 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
LINC01440-202ENST00000450623 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
LINC01440-202ENST00000450623 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
LINC01440-202ENST00000450623 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
LINC01440-202ENST00000450623 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
LINC01440-202ENST00000450623 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
LINC01440-202ENST00000450623 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
LINC01440-202ENST00000450623 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
LINC01440-202ENST00000450623 MIER1Q8N108 512 aa12.6□□□□□ -0.39
LINC01440-202ENST00000450623 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
LINC01440-202ENST00000450623 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
LINC01440-202ENST00000450623 CLCN6P51797 869 aa12.56□□□□□ -0.4
LINC01440-202ENST00000450623 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
LINC01440-202ENST00000450623 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
LINC01440-202ENST00000450623 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms