RNA–Protein interactions for RNA: ENST00000449581.1

LINC01428-201, Transcript of long intergenic non-protein coding RNA 1428, humanhuman

TSL 1 (best) BASIC

Gene LINC01428, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01428-201ENST00000449581 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
LINC01428-201ENST00000449581 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
LINC01428-201ENST00000449581 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
LINC01428-201ENST00000449581 ADCY10Q96PN6 1610 aa17.77■□□□□ 0.44
LINC01428-201ENST00000449581 DAPK1P53355 1430 aa17.76■□□□□ 0.43
LINC01428-201ENST00000449581 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
LINC01428-201ENST00000449581 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
LINC01428-201ENST00000449581 ADGRL2O95490 1459 aa17.75■□□□□ 0.43
LINC01428-201ENST00000449581 RAPGEF6Q8TEU7 1601 aa17.74■□□□□ 0.43
LINC01428-201ENST00000449581 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
LINC01428-201ENST00000449581 CCDC7Q96M83 1385 aa17.74■□□□□ 0.43
LINC01428-201ENST00000449581 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
LINC01428-201ENST00000449581 ZBED9Q6R2W3 1325 aa17.73■□□□□ 0.43
LINC01428-201ENST00000449581 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
LINC01428-201ENST00000449581 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
LINC01428-201ENST00000449581 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
LINC01428-201ENST00000449581 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
LINC01428-201ENST00000449581 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
LINC01428-201ENST00000449581 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
LINC01428-201ENST00000449581 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
LINC01428-201ENST00000449581 WASHC2AQ641Q2 1341 aa17.7■□□□□ 0.42
LINC01428-201ENST00000449581 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
LINC01428-201ENST00000449581 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 KIF14Q15058 1648 aa17.69■□□□□ 0.42
LINC01428-201ENST00000449581 ARHGEF12Q9NZN5 1544 aa17.68■□□□□ 0.42
LINC01428-201ENST00000449581 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
LINC01428-201ENST00000449581 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
LINC01428-201ENST00000449581 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
LINC01428-201ENST00000449581 TROQ12816 1431 aaPredicted RBP17.66■□□□□ 0.42
LINC01428-201ENST00000449581 ABCC5O15440 1437 aa17.65■□□□□ 0.42
LINC01428-201ENST00000449581 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
LINC01428-201ENST00000449581 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
LINC01428-201ENST00000449581 PRKRIP1Q9H875 184 aaPredicted RBP17.64■□□□□ 0.41
LINC01428-201ENST00000449581 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
LINC01428-201ENST00000449581 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
LINC01428-201ENST00000449581 UHRF1BP1Q6BDS2 1440 aa17.62■□□□□ 0.41
LINC01428-201ENST00000449581 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
LINC01428-201ENST00000449581 MSH5O43196 834 aa17.61■□□□□ 0.41
LINC01428-201ENST00000449581 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
LINC01428-201ENST00000449581 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
LINC01428-201ENST00000449581 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
LINC01428-201ENST00000449581 KDM6BO15054 1643 aa17.61■□□□□ 0.41
LINC01428-201ENST00000449581 BCANQ96GW7 911 aa17.6■□□□□ 0.41
LINC01428-201ENST00000449581 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
LINC01428-201ENST00000449581 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
LINC01428-201ENST00000449581 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
LINC01428-201ENST00000449581 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
LINC01428-201ENST00000449581 CAMSAP2Q08AD1 1489 aa17.58■□□□□ 0.41
LINC01428-201ENST00000449581 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
LINC01428-201ENST00000449581 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
LINC01428-201ENST00000449581 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
LINC01428-201ENST00000449581 INSRP06213 1382 aa17.56■□□□□ 0.4
LINC01428-201ENST00000449581 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
LINC01428-201ENST00000449581 ZMYM4Q5VZL5 1548 aa17.56■□□□□ 0.4
LINC01428-201ENST00000449581 PZPP20742 1482 aa17.56■□□□□ 0.4
LINC01428-201ENST00000449581 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
LINC01428-201ENST00000449581 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
LINC01428-201ENST00000449581 KDM5CP41229 1560 aa17.53■□□□□ 0.4
LINC01428-201ENST00000449581 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
LINC01428-201ENST00000449581 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.4
LINC01428-201ENST00000449581 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
LINC01428-201ENST00000449581 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
LINC01428-201ENST00000449581 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
LINC01428-201ENST00000449581 GPATCH8Q9UKJ3 1502 aaKnown RBP17.49■□□□□ 0.39
LINC01428-201ENST00000449581 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
LINC01428-201ENST00000449581 LAMC1P11047 1609 aa17.48■□□□□ 0.39
LINC01428-201ENST00000449581 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
LINC01428-201ENST00000449581 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
LINC01428-201ENST00000449581 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
LINC01428-201ENST00000449581 USP47Q96K76 1375 aa17.46■□□□□ 0.39
LINC01428-201ENST00000449581 KIF15Q9NS87 1388 aa17.46■□□□□ 0.39
LINC01428-201ENST00000449581 PTPRGP23470 1445 aa17.46■□□□□ 0.39
LINC01428-201ENST00000449581 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.39
LINC01428-201ENST00000449581 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
LINC01428-201ENST00000449581 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
LINC01428-201ENST00000449581 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
LINC01428-201ENST00000449581 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
LINC01428-201ENST00000449581 NUP160Q12769 1436 aa17.44■□□□□ 0.38
LINC01428-201ENST00000449581 RALBP1Q15311 655 aa17.43■□□□□ 0.38
LINC01428-201ENST00000449581 ABCA8O94911 1581 aa17.43■□□□□ 0.38
LINC01428-201ENST00000449581 WASHC2CQ9Y4E1 1318 aa17.43■□□□□ 0.38
LINC01428-201ENST00000449581 E9PCH4 1651 aa17.42■□□□□ 0.38
LINC01428-201ENST00000449581 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
LINC01428-201ENST00000449581 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
LINC01428-201ENST00000449581 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
LINC01428-201ENST00000449581 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
LINC01428-201ENST00000449581 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
LINC01428-201ENST00000449581 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
LINC01428-201ENST00000449581 ABCC10Q5T3U5 1492 aa17.39■□□□□ 0.37
LINC01428-201ENST00000449581 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.37
LINC01428-201ENST00000449581 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
LINC01428-201ENST00000449581 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
LINC01428-201ENST00000449581 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
LINC01428-201ENST00000449581 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
LINC01428-201ENST00000449581 PRG4Q92954 1404 aaPredicted RBP17.34■□□□□ 0.37
LINC01428-201ENST00000449581 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms