RNA–Protein interactions for RNA: ENST00000449557.6

SCN5A-207, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 5,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-207ENST00000449557 PKD2Q13563 968 aa15.07■□□□□ 0
SCN5A-207ENST00000449557 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
SCN5A-207ENST00000449557 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
SCN5A-207ENST00000449557 FGD1P98174 961 aa15.07■□□□□ 0
SCN5A-207ENST00000449557 ZRSR1Q15695 479 aaKnown RBP15.06■□□□□ 0
SCN5A-207ENST00000449557 JPH4Q96JJ6 628 aa15.06■□□□□ 0
SCN5A-207ENST00000449557 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ 0
SCN5A-207ENST00000449557 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
SCN5A-207ENST00000449557 PPP4R2Q9NY27 417 aa15.04■□□□□ -0
SCN5A-207ENST00000449557 KCNJ4P48050 445 aa15.04■□□□□ -0
SCN5A-207ENST00000449557 CHMP4BQ9H444 224 aaKnown RBP15.04■□□□□ -0
SCN5A-207ENST00000449557 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
SCN5A-207ENST00000449557 NUTM2FA1L443 756 aa15.04■□□□□ -0
SCN5A-207ENST00000449557 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
SCN5A-207ENST00000449557 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
SCN5A-207ENST00000449557 G3V3G9 751 aa15.02■□□□□ -0
SCN5A-207ENST00000449557 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
SCN5A-207ENST00000449557 NOP58Q9Y2X3 529 aaKnown RBP15.02■□□□□ -0
SCN5A-207ENST00000449557 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
SCN5A-207ENST00000449557 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
SCN5A-207ENST00000449557 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
SCN5A-207ENST00000449557 NUP155O75694 1391 aa15□□□□□ -0.01
SCN5A-207ENST00000449557 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
SCN5A-207ENST00000449557 FAM69CQ0P6D2 419 aa14.99□□□□□ -0.01
SCN5A-207ENST00000449557 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
SCN5A-207ENST00000449557 MSH5O43196 834 aa14.99□□□□□ -0.01
SCN5A-207ENST00000449557 CLSTN1O94985 981 aa14.98□□□□□ -0.01
SCN5A-207ENST00000449557 MS4A1P11836 297 aa14.98□□□□□ -0.01
SCN5A-207ENST00000449557 EVA1CP58658 441 aa14.98□□□□□ -0.01
SCN5A-207ENST00000449557 FOXD1Q16676 465 aa14.98□□□□□ -0.01
SCN5A-207ENST00000449557 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
SCN5A-207ENST00000449557 LTV1Q96GA3 475 aaPredicted RBP14.97□□□□□ -0.01
SCN5A-207ENST00000449557 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
SCN5A-207ENST00000449557 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
SCN5A-207ENST00000449557 AMPHP49418 695 aa14.95□□□□□ -0.02
SCN5A-207ENST00000449557 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
SCN5A-207ENST00000449557 RGS3P49796 1198 aa14.94□□□□□ -0.02
SCN5A-207ENST00000449557 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
SCN5A-207ENST00000449557 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
SCN5A-207ENST00000449557 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
SCN5A-207ENST00000449557 PTPRGP23470 1445 aa14.92□□□□□ -0.02
SCN5A-207ENST00000449557 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
SCN5A-207ENST00000449557 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
SCN5A-207ENST00000449557 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
SCN5A-207ENST00000449557 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCN5A-207ENST00000449557 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
SCN5A-207ENST00000449557 RSPH4AQ5TD94 716 aa14.91□□□□□ -0.02
SCN5A-207ENST00000449557 EIF3AQ14152 1382 aaKnown RBP14.9□□□□□ -0.02
SCN5A-207ENST00000449557 PTMAP06454 111 aaKnown RBP14.89□□□□□ -0.03
SCN5A-207ENST00000449557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.89□□□□□ -0.03
SCN5A-207ENST00000449557 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
SCN5A-207ENST00000449557 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
SCN5A-207ENST00000449557 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
SCN5A-207ENST00000449557 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
SCN5A-207ENST00000449557 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
SCN5A-207ENST00000449557 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
SCN5A-207ENST00000449557 APBB1O00213 710 aa14.86□□□□□ -0.03
SCN5A-207ENST00000449557 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.86□□□□□ -0.03
SCN5A-207ENST00000449557 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
SCN5A-207ENST00000449557 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
SCN5A-207ENST00000449557 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
SCN5A-207ENST00000449557 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
SCN5A-207ENST00000449557 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
SCN5A-207ENST00000449557 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
SCN5A-207ENST00000449557 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
SCN5A-207ENST00000449557 TRAK1Q9UPV9 953 aa14.84□□□□□ -0.03
SCN5A-207ENST00000449557 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
SCN5A-207ENST00000449557 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
SCN5A-207ENST00000449557 DNTTIP2Q5QJE6 756 aaKnown RBP14.84□□□□□ -0.03
SCN5A-207ENST00000449557 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
SCN5A-207ENST00000449557 CCER2I3L3R5 266 aa14.84□□□□□ -0.03
SCN5A-207ENST00000449557 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.04
SCN5A-207ENST00000449557 FRAT2O75474 233 aaPredicted RBP14.83□□□□□ -0.04
SCN5A-207ENST00000449557 KTN1Q86UP2 1357 aaKnown RBP14.82□□□□□ -0.04
SCN5A-207ENST00000449557 KANK4Q5T7N3 995 aaPredicted RBP14.82□□□□□ -0.04
SCN5A-207ENST00000449557 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
SCN5A-207ENST00000449557 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
SCN5A-207ENST00000449557 ATF3P18847 181 aa14.81□□□□□ -0.04
SCN5A-207ENST00000449557 IPO8O15397 1037 aaKnown RBP14.81□□□□□ -0.04
SCN5A-207ENST00000449557 GNL2Q13823 731 aaKnown RBP14.8□□□□□ -0.04
SCN5A-207ENST00000449557 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
SCN5A-207ENST00000449557 MCCP23508 829 aa14.79□□□□□ -0.04
SCN5A-207ENST00000449557 PSME1Q06323 249 aa14.79□□□□□ -0.04
SCN5A-207ENST00000449557 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
SCN5A-207ENST00000449557 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
SCN5A-207ENST00000449557 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SCN5A-207ENST00000449557 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.04
SCN5A-207ENST00000449557 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
SCN5A-207ENST00000449557 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
SCN5A-207ENST00000449557 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
SCN5A-207ENST00000449557 GOLGA6L4A6NEF3 574 aa14.76□□□□□ -0.05
SCN5A-207ENST00000449557 HDAC5Q9UQL6 1122 aa14.75□□□□□ -0.05
SCN5A-207ENST00000449557 COG3Q96JB2 828 aa14.74□□□□□ -0.05
SCN5A-207ENST00000449557 PLCB2Q00722 1185 aa14.74□□□□□ -0.05
SCN5A-207ENST00000449557 SLC4A10Q6U841 1118 aa14.74□□□□□ -0.05
SCN5A-207ENST00000449557 HSCBQ8IWL3 235 aa14.73□□□□□ -0.05
SCN5A-207ENST00000449557 ITPRIPQ8IWB1 547 aa14.73□□□□□ -0.05
SCN5A-207ENST00000449557 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
SCN5A-207ENST00000449557 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCN5A-207ENST00000449557 TSHZ2Q9NRE2 1034 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms